prot_M-pyrifera_M_contig126664.5369.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig126664.5369.1
Unique Name	prot_M-pyrifera_M_contig126664.5369.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	169

Homology

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: E4PF78_MARAH (Amino acid ABC transporter, permease protein n=28 Tax=Marinobacter TaxID=2742 RepID=E4PF78_MARAH)

HSP 1 Score: 328 bits (842), Expect = 6.830e-111
Identity = 166/169 (98.22%), Postives = 168/169 (99.41%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRS+MPIIRGICVVFIEVW+A PLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG
Sbjct:  105 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSDMPIIRGICVVFIEVWRAVPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 273

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A1W6K8K6_9GAMM (Inner membrane amino-acid ABC transporter permease protein YhdY n=10 Tax=Bacteria TaxID=2 RepID=A0A1W6K8K6_9GAMM)

HSP 1 Score: 313 bits (803), Expect = 5.510e-105
Identity = 157/169 (92.90%), Postives = 163/169 (96.45%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            +SF PQFIERFPGRKWLGLFG+ GLPIVGYFLIPGG FGLEEVQSSKWGGLMLTLILAYIGIIASLPIG LLALGRRSEMPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAA ALGLGYW+KMG
Sbjct:  104 LSFAPQFIERFPGRKWLGLFGLTGLPIVGYFLIPGGVFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGTLLALGRRSEMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAASALGLGYWKKMG 272

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A1D9GI56_9GAMM (Amino acid ABC transporter permease n=1 Tax=Marinobacter salinus TaxID=1874317 RepID=A0A1D9GI56_9GAMM)

HSP 1 Score: 311 bits (798), Expect = 3.160e-104
Identity = 150/169 (88.76%), Postives = 166/169 (98.22%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            V+FVPQFIE FPGRKWLG+FG+ GLP++GYFLIPGG+FGLEEV+S+KWGGLMLTLILAYIGI+ASLPIG++LALGRRSEMP+IRG+CV+FIEVW+A PLITVLFMASVMLPLFLPEG+NFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG
Sbjct:  104 VAFVPQFIENFPGRKWLGIFGMTGLPVIGYFLIPGGTFGLEEVESTKWGGLMLTLILAYIGILASLPIGVVLALGRRSEMPMIRGLCVIFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 272

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A5B0VLA4_9GAMM (Amino acid ABC transporter permease n=1 Tax=Marinobacter salinexigens TaxID=2919747 RepID=A0A5B0VLA4_9GAMM)

HSP 1 Score: 311 bits (796), Expect = 6.350e-104
Identity = 154/169 (91.12%), Postives = 162/169 (95.86%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            V+FVPQFIERFPGRKWLGLFG+ GLP+ GY LIPGG FGL EV+S+KWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAA ALGLGYWRKMG
Sbjct:  104 VAFVPQFIERFPGRKWLGLFGVVGLPVAGYILIPGGPFGLSEVESTKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGLNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAASALGLGYWRKMG 272

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: UPI001EF07125 (amino acid ABC transporter permease n=1 Tax=Marinobacter pelagius TaxID=379482 RepID=UPI001EF07125)

HSP 1 Score: 311 bits (796), Expect = 6.350e-104
Identity = 153/169 (90.53%), Postives = 164/169 (97.04%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            V+FVPQFIERFPGRKWLGLFGI GLP++GYFLIPGG FGLE V+S+KWGGLMLTLILAYIGI+ASLPIGILLALGRRS+MPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+KMG
Sbjct:  104 VAFVPQFIERFPGRKWLGLFGITGLPVIGYFLIPGGLFGLETVESTKWGGLMLTLILAYIGILASLPIGILLALGRRSDMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLLRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKMG 272

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: UPI001CBD193D (amino acid ABC transporter permease n=2 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001CBD193D)

HSP 1 Score: 309 bits (792), Expect = 2.570e-103
Identity = 152/169 (89.94%), Postives = 164/169 (97.04%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            V+FVPQFIE FPGRKWLG+FG+ GLP++GYFLIPGGSFGLEEV S+KWGGLMLTLILAYIGI+ASLPIG LLALGRRS+MPIIRG+CVVFIEVW+A PLITVLFMASVMLPLFLPEGVNFEKL+RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+KMG
Sbjct:  104 VAFVPQFIEGFPGRKWLGIFGMTGLPLIGYFLIPGGSFGLEEVPSTKWGGLMLTLILAYIGILASLPIGTLLALGRRSDMPIIRGLCVVFIEVWRAVPLITVLFMASVMLPLFLPEGVNFEKLSRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKMG 272

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A2V3ZK47_9GAMM (Amino acid ABC transporter permease n=7 Tax=Marinobacter TaxID=2742 RepID=A0A2V3ZK47_9GAMM)

HSP 1 Score: 308 bits (788), Expect = 1.040e-102
Identity = 151/169 (89.35%), Postives = 163/169 (96.45%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            +SFVPQFIERFPGRKW GLFG+ GLP+VGYFL+PGG+FGLE V+SSKWGGLMLTLILAYIGI+ASLPIGI+LALGRRSEMPIIRGICVVFIEVW+A PLITVLFMASVMLPLFLP+G+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+K G
Sbjct:  104 LSFVPQFIERFPGRKWFGLFGLTGLPVVGYFLVPGGNFGLEVVESSKWGGLMLTLILAYIGILASLPIGIVLALGRRSEMPIIRGICVVFIEVWRAVPLITVLFMASVMLPLFLPDGMNFEKLMRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKTG 272

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: A0A0J7JAB6_9GAMM (Amino acid ABC transporter membrane protein 2, PAAT family n=3 Tax=Marinobacter TaxID=2742 RepID=A0A0J7JAB6_9GAMM)

HSP 1 Score: 307 bits (786), Expect = 2.090e-102
Identity = 150/169 (88.76%), Postives = 162/169 (95.86%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            +SFVPQFIE FPGRKWLG+FG+ GLP++GYFLIPGGSFGLE V S+KWGGLMLTLI+AYIGIIASLPIGILLALGRRSEMPIIRG+C+VFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+K G
Sbjct:  104 LSFVPQFIENFPGRKWLGIFGMTGLPVIGYFLIPGGSFGLEAVDSAKWGGLMLTLIIAYIGIIASLPIGILLALGRRSEMPIIRGLCIVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLLRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKTG 272

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BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: UPI0012482005 (amino acid ABC transporter permease n=1 Tax=Marinobacter halotolerans TaxID=1569211 RepID=UPI0012482005)

HSP 1 Score: 306 bits (784), Expect = 4.210e-102
Identity = 151/169 (89.35%), Postives = 162/169 (95.86%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            VSF+PQFIERFPGRKW G+FG+ GLP++G FL+PGGSFGLE VQSSKWGGLMLTLILAYIGI+ASLPIGI+LALGRRSEMPIIRGICVVFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYW+K G
Sbjct:  104 VSFLPQFIERFPGRKWFGIFGLTGLPLIGIFLVPGGSFGLEIVQSSKWGGLMLTLILAYIGILASLPIGIVLALGRRSEMPIIRGICVVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLMRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWKKTG 272

[Close]

BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Match: W5YJX5_9GAMM (Amino acid ABC transporter permease n=7 Tax=Marinobacter TaxID=2742 RepID=W5YJX5_9GAMM)

HSP 1 Score: 305 bits (780), Expect = 1.700e-101
Identity = 150/169 (88.76%), Postives = 162/169 (95.86%), Query Frame = 0

Query:    1 VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGGLMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLITVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 169
            V+FVPQFIERFP RKW G+FG+ GLP++GYFLIPGG+FGLE V+S+KWGGLMLTLILAYIGI+ASLPIGILLALGRRSEMPIIRGI +VFIEVW+A PLITVLFMASVMLPLFLPEG+NFEKL RALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG
Sbjct:  104 VAFVPQFIERFPARKWFGIFGMTGLPLIGYFLIPGGTFGLEAVESTKWGGLMLTLILAYIGILASLPIGILLALGRRSEMPIIRGISIVFIEVWRAVPLITVLFMASVMLPLFLPEGMNFEKLMRALIGITLWQSAYMAEVIRGGLQAIPRGQYEAADALGLGYWRKMG 272

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig126664.5369.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
E4PF78_MARAH	6.830e-111	98.22	Amino acid ABC transporter, permease protein n=28 ...	[more]
A0A1W6K8K6_9GAMM	5.510e-105	92.90	Inner membrane amino-acid ABC transporter permease...	[more]
A0A1D9GI56_9GAMM	3.160e-104	88.76	Amino acid ABC transporter permease n=1 Tax=Marino...	[more]
A0A5B0VLA4_9GAMM	6.350e-104	91.12	Amino acid ABC transporter permease n=1 Tax=Marino...	[more]
UPI001EF07125	6.350e-104	90.53	amino acid ABC transporter permease n=1 Tax=Marino...	[more]
UPI001CBD193D	2.570e-103	89.94	amino acid ABC transporter permease n=2 Tax=unclas...	[more]
A0A2V3ZK47_9GAMM	1.040e-102	89.35	Amino acid ABC transporter permease n=7 Tax=Marino...	[more]
A0A0J7JAB6_9GAMM	2.090e-102	88.76	Amino acid ABC transporter membrane protein 2, PAA...	[more]
UPI0012482005	4.210e-102	89.35	amino acid ABC transporter permease n=1 Tax=Marino...	[more]
W5YJX5_9GAMM	1.700e-101	88.76	Amino acid ABC transporter permease n=7 Tax=Marino...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR010065	Amino acid ABC transporter, permease protein, 3-TM domain	TIGRFAM	TIGR01726	TIGR01726	coord: 48..144 e-value: 1.3E-19 score: 68.5
IPR035906	MetI-like superfamily	GENE3D	1.10.3720.10		coord: 39..169 e-value: 8.0E-28 score: 99.4
IPR035906	MetI-like superfamily	SUPERFAMILY	161098	MetI-like	coord: 47..168
IPR000515	ABC transporter type 1, transmembrane domain MetI-like	PFAM	PF00528	BPD_transp_1	coord: 66..167 e-value: 5.8E-12 score: 45.7
IPR000515	ABC transporter type 1, transmembrane domain MetI-like	PROSITE	PS50928	ABC_TM1	coord: 51..169 score: 14.59
None	No IPR available	PANTHER	PTHR30614:SF41	INNER MEMBRANE AMINO-ACID ABC TRANSPORTER PERMEASE PROTEIN YHDY	coord: 31..168
None	No IPR available	PANTHER	PTHR30614	MEMBRANE COMPONENT OF AMINO ACID ABC TRANSPORTER	coord: 31..168
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..15
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 115..169
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 53..74
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 16..33
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 86..114
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 75..85
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 34..52
None	No IPR available	TMHMM	TMhelix		coord: 16..38
None	No IPR available	TMHMM	TMhelix		coord: 88..110
None	No IPR available	TMHMM	TMhelix		coord: 53..75

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig126664	contig	M-pyrifera_M_contig126664:2..508 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig126664.5369.1	mRNA_M-pyrifera_M_contig126664.5369.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig126664 2..508 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig126664.5369.1 ID=prot_M-pyrifera_M_contig126664.5369.1|Name=mRNA_M-pyrifera_M_contig126664.5369.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
VSFVPQFIERFPGRKWLGLFGIFGLPIVGYFLIPGGSFGLEEVQSSKWGG
LMLTLILAYIGIIASLPIGILLALGRRSEMPIIRGICVVFIEVWQAGPLI
TVLFMASVMLPLFLPEGVNFEKLARALIGITLWQSAYMAEVIRGGLQAIP
RGQYEAADALGLGYWRKMG

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR010065	AA_ABC_transptr_permease_3TM
IPR035906	MetI-like_sf
IPR000515	MetI-like