prot_M-pyrifera_M_contig12665.5365.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12665.5365.1
Unique Nameprot_M-pyrifera_M_contig12665.5365.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length712
Homology
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: D8LU88_ECTSI (Ubiquitin domain-containing protein (Partial) (Fragment) n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LU88_ECTSI)

HSP 1 Score: 488 bits (1256), Expect = 4.040e-148
Identity = 386/738 (52.30%), Postives = 437/738 (59.21%), Query Frame = 0
Query:    1 VELESVGEEVLSDAVYLLLSLLRQSVPIKPLVSAVAHVLTLVAALTGG-VAGGARNLERHPALGSLLRALFIRVSNRSVRRAACAVLFRASYWQALGRDASATAVGSGGDDEAVMGAAGVXXXXXXXXXXXXTAAKSVRRAP----ARSNELANVLLGSLKADLARVKTTPSARGGXXXXXXXXGPCIEGLSPVRRPRAGAARTTDKDSGGGSIGGVGNGGGRGIGEGLVPVIVPRLHLVEVTEFVAGLVHVMLESARATATAGTAGAGRQLPPGGSGXXXXXXXXXXXXXXXXXXXXXXXPGSRVGATAARAPVLPVIASRDKETGLS-----VPGGIAPGARSVGGGGGVEGTGDSAGCRNKESSAAAAEWLLEEAARRLAAHEFTETFKSDASDRLLVSLLHALTVAVAGSGRRKRLAETLFSNLALA----------SSPXXXXXXXXXXKPTSSALLPRSGLIRFLYEGCLFPPACEQEPAGEQAGSAPANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAESSLGPRCKKRESRRAAFALLSALCRGEEGHLRRAFVLLGGRDLMTRSFLESDVGDDGGESWRVATAAEAS----AGGHLGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALDDMSGAG--SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQV 712
            V+LESVG  VLSD V+LL+SLLRQS P+KPLVSAVAHVLTLV +L+GG +AGGAR LERHPALGSLLRAL IR+   SVRR+AC+VL RAS WQALGR+ S  + G  G      GA G              A+ + R        R+NELA VLL SL+ADLARV+  P AR          G     LSPVRR R G    TD               G G+G G  P++VPRLHLVEVT FVAGLVHVMLE+A  ++    A   RQ  P                                    AR  VLP  A RD ETG S     +   +A  A  V  G         +    +E ++ AAEWLLEEAARRLAAHEFTETF+SDA D +L++LLHALTVAV+GS RRKRLAETLFS L+ +           S             T  A +PR GLIRFLYE CLFPPA  +EP            XXXXXXXXXXXXXXXXXXXXXXXXXXXX  VAESSLGPRCKKRESRRAAFALLSALCRG E HLR+AFVLLGGRDL+T+ FL+SD+ D G       +A+++S    A G  G                                      VA D   GAG  SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHV  FSL+LLGL PDRR  G    +PLQE+D+VLLQLQV
Sbjct: 2071 VDLESVGGSVLSDVVHLLISLLRQSTPVKPLVSAVAHVLTLVGSLSGGGLAGGARALERHPALGSLLRALCIRIPESSVRRSACSVLHRASAWQALGREPSCCSGGGVGAGAGAAGAVGRVVASRNGGGEVAAASSTARLGKDGPETRNNELARVLLASLRADLARVQAVPFARSAGPGAAVRVG-----LSPVRRAR-GDVTATD---------------GCGVG-GSAPIVVPRLHLVEVTAFVAGLVHVMLENASLSSFPPPAVPPRQPRPAAG------LPQQQELSTNRQTARHPQXXXXXXXLPARPSVLP--ADRD-ETGTSNDAARLVASVATAAGGVSRGADTASVNGESNEGERERASTAAEWLLEEAARRLAAHEFTETFESDAPDHVLITLLHALTVAVSGSPRRKRLAETLFSRLSSSXXXXXXXXXXGSCSSWAAAGVAASATGVAHVPRPGLIRFLYERCLFPPA-SREPXXXXX-------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRESRRAAFALLSALCRGNEAHLRQAFVLLGGRDLVTKGFLDSDM-DSGNLGSEDGSASDSSVVAVADGSRGESHG----------------------------------VATDASGGAGVRSGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESNHPLQEQDEVLLQLQV 2734          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A6H5KTV6_9PHAE (USP domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KTV6_9PHAE)

HSP 1 Score: 479 bits (1232), Expect = 6.200e-145
Identity = 401/734 (54.63%), Postives = 452/734 (61.58%), Query Frame = 0
Query:    1 VELESVGEEVLSDAVYLLLSLLRQ---SVPIKPLVSAVAHVLTLVAALTGG-VAGGARNLERHPALGSLLRALFIRVSNRSVRRAACAVLFRASYWQALGRDASATAVGSGGDDEAVMGAAGVXXXXXXXXXXXXTAAKSVRRAPARSNELANVLLGSLKADLARVKTTPSARGGXXXXXXXXGPCIEGLSPVRRPRAGAARTTDKDSGGGSIGGVGNGGGRGIGEGLVPVIVPRLHLVEVTEFVAGLVHVMLESARATATAGTAGAGRQLPPGGSGXXXXXXXXXXXXXXXXXXXXXXXPGSRVGATAARAPVLPVIASRDKETGLS--VPGGIAPGARSVGGGGGVEGTGDSAGCR--------NKESSAAAAEWLLEEAARRLAAHEFTETFKSDASDRLLVSLLHALTVAVAGSGRRKRLAETLFSNLALASSPXXXXXXXXXX----KPTSSALLPRSGLIRFLYEGCLFPPACEQEPAGEQAGSAPANGXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAVAESSLGPRCKKRESRRAAFALLSALCRGEEGHLRRAFVLLGGRDLMTRSFLESDVGDDGGESWRVATAAEASAGGHL-GSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVALDDMSGAG---SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQV 712
            V LESVG  VLSD V+LL+SLLRQ     P+KPLVSAVAHVLTLV +L+GG +AGGAR LERHPALGSLLRAL IR+ + SVRR+AC+VL RAS WQALGRD S  +    G       ++              TA      A  R+NELA VLL SL+ DLARV+  P AR           P   GLSPVRR R G A   +  + G  +GG              P++VPRLHLVEVT FVAGLVHVMLE+A  ++    A   RQ  P                      XXXXX         AR  VLP  A RD ETG S    G +A  A + GG   V    D+A            +E ++ AAEWLLEEAARRLAAHEFTETF+SDA D +L++LLHALTVAVAGS RRKRLAETLFS L+ +   XXXXXXXXXX      T  A +PR GLIRFLYE CLFPPA  +EP                    XXXXXXXXXXXXXXXXXXXX  VAESSLGPRCKKRESRRAAFALLSALCRG E HLR+AFVLLGGRDL+T+ FL+SD+ D G       +A+++S      GS                     XXXXXXXXXXX       L+D SG     SGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHV  FSL+LLGL PDRR  G    +PLQEED+VLLQLQV
Sbjct: 1073 VNLESVGGSVLSDVVHLLISLLRQVHRGTPVKPLVSAVAHVLTLVGSLSGGGLAGGARALERHPALGSLLRALCIRIPDSSVRRSACSVLHRASAWQALGRDPSCCSEARNGXXXXXXXSS--------------TAKLGKDGAEKRNNELARVLLTSLRTDLARVQAVPFARSAGPGA-----PVRVGLSPVRRAR-GDATAAETAAIGSGVGGS------------APIVVPRLHLVEVTAFVAGLVHVMLENASLSSFPPPAVPPRQPRPAAGLPQQQELSTNRQAPRHPQQXXXXXXXXXXXXXXARPSVLP--ADRD-ETGTSKDAAGLVASVAAAAGG---VSRGADTASVNVNGERDEGERELASTAAEWLLEEAARRLAAHEFTETFESDAPDHVLITLLHALTVAVAGSPRRKRLAETLFSRLSSSXXXXXXXXXXXXXXXXXSATGVARVPRPGLIRFLYERCLFPPA-SREPXXXXX---------------XXXXXXXXXXXXXXXXXXXXXXVAESSLGPRCKKRESRRAAFALLSALCRGNEAHLRQAFVLLGGRDLVTKGFLDSDM-DSGNLGSEDGSASDSSVIAVADGSRGASHGVATVAGDGAEEATAAXXXXXXXXXXXPSTPAATLEDASGGAGVRSGEPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVQDFSLQLLGLVPDRRAGGGESSDPLQEEDEVLLQLQV 1751          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3MAA4_9STRA (Hypothetical protein (Fragment) n=2 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MAA4_9STRA)

HSP 1 Score: 71.6 bits (174), Expect = 8.890e-10
Identity = 37/79 (46.84%), Postives = 50/79 (63.29%), Query Frame = 0
Query:  639 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDR-KKNPLQEEDD----VLLQLQV 712
            W+YDP ++LKE   +VGL NQG TCYMNS +QQL+H+P+F   LL +    +   D    N L+E+ D    +L QLQV
Sbjct:    5 WNYDPDTLLKEPDAYVGLCNQGGTCYMNSFIQQLFHIPAFKTGLLRINAAAKTAKDATSNNSLEEKPDPNVELLFQLQV 83          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S4ITW2_9EUKA (Ubiquitin carboxyl-terminal hydrolase (Fragment) n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4ITW2_9EUKA)

HSP 1 Score: 63.5 bits (153), Expect = 6.530e-7
Identity = 28/52 (53.85%), Postives = 38/52 (73.08%), Query Frame = 0
Query:  637 EPWDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPD 688
            + W+Y P++++K    +VGLQN GATCYMNSLLQQLY +P+F   +L L  D
Sbjct:   53 QSWNYYPSTLVKSPCGYVGLQNLGATCYMNSLLQQLYMIPNFRCGILSLPHD 104          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3KWE0_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KWE0_EUPCR)

HSP 1 Score: 56.2 bits (134), Expect = 4.820e-6
Identity = 27/54 (50.00%), Postives = 37/54 (68.52%), Query Frame = 0
Query:  639 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLL----GLAPD 688
            W Y P+   ++ G++ G++N G  CYMNS+LQQLYHVPSF  +LL    G AP+
Sbjct:   14 WMYTPSGSTRK-GKYSGIRNLGCICYMNSMLQQLYHVPSFRYQLLQADDGAAPE 66          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3Q4J1_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q4J1_9STRA)

HSP 1 Score: 61.2 bits (147), Expect = 8.000e-6
Identity = 26/45 (57.78%), Postives = 34/45 (75.56%), Query Frame = 0
Query:  639 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLL 683
            W +DP+ V +     VGL+NQGATCYMNSLLQQL+H+P+F   +L
Sbjct: 1600 WGFDPSMVARSVTGLVGLRNQGATCYMNSLLQQLFHIPAFRKGIL 1644          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S4RXU1_9STRA (Hypothetical protein n=1 Tax=Ditylum brightwellii TaxID=49249 RepID=A0A7S4RXU1_9STRA)

HSP 1 Score: 60.5 bits (145), Expect = 1.380e-5
Identity = 29/74 (39.19%), Postives = 42/74 (56.76%), Query Frame = 0
Query:  639 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQV 712
            W +DP S  K    +VG++NQGATCY+NSLLQQ + +P F   +L   P    +   +   +   D +L QLQ+
Sbjct: 1504 WSFDPLSRQKSLTGYVGMKNQGATCYLNSLLQQFFLIPPFRQGVLSCNPYLSAENTPELKEMDINDSLLYQLQL 1577          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A446S390_TRITD (USP domain-containing protein n=2 Tax=Triticum turgidum subsp. durum TaxID=4567 RepID=A0A446S390_TRITD)

HSP 1 Score: 55.1 bits (131), Expect = 1.590e-5
Identity = 27/40 (67.50%), Postives = 31/40 (77.50%), Query Frame = 0
Query:  639 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSF 678
            W YD     KE+G +VGL+NQGATCYMNSLLQ LYH+P F
Sbjct:    5 WTYDSK---KETG-YVGLKNQGATCYMNSLLQTLYHIPYF 40          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A7S3KIB0_EUPCR (Hypothetical protein (Fragment) n=1 Tax=Euplotes crassus TaxID=5936 RepID=A0A7S3KIB0_EUPCR)

HSP 1 Score: 55.1 bits (131), Expect = 1.710e-5
Identity = 29/73 (39.73%), Postives = 42/73 (57.53%), Query Frame = 0
Query:  639 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPLQEEDDVLLQLQ 711
            W   P +  K    +VG++N G  CYM S+LQQLY +PSF   +L +        D KK+ + +ED++L QLQ
Sbjct:   27 WTISPHTDEKSQTGYVGIKNLGCICYMISMLQQLYMIPSFRENILAVE-------DPKKDEIPKEDNLLFQLQ 92          
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Match: A0A1I7WZ09_HETBA (Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Heterorhabditis bacteriophora TaxID=37862 RepID=A0A1I7WZ09_HETBA)

HSP 1 Score: 58.9 bits (141), Expect = 2.870e-5
Identity = 23/38 (60.53%), Postives = 30/38 (78.95%), Query Frame = 0
Query:  639 WDYDPTSVLKESGQHVGLQNQGATCYMNSLLQQLYHVP 676
            WDY P   L+E G +VGL+N GATCYMNS+LQQ++ +P
Sbjct:  248 WDYQPDHSLREHGNYVGLKNGGATCYMNSMLQQMFMIP 285          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12665.5365.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LU88_ECTSI4.040e-14852.30Ubiquitin domain-containing protein (Partial) (Fra... [more]
A0A6H5KTV6_9PHAE6.200e-14554.63USP domain-containing protein n=1 Tax=Ectocarpus s... [more]
A0A7S3MAA4_9STRA8.890e-1046.84Hypothetical protein (Fragment) n=2 Tax=Spumella e... [more]
A0A7S4ITW2_9EUKA6.530e-753.85Ubiquitin carboxyl-terminal hydrolase (Fragment) n... [more]
A0A7S3KWE0_EUPCR4.820e-650.00Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
A0A7S3Q4J1_9STRA8.000e-657.78Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A7S4RXU1_9STRA1.380e-539.19Hypothetical protein n=1 Tax=Ditylum brightwellii ... [more]
A0A446S390_TRITD1.590e-567.50USP domain-containing protein n=2 Tax=Triticum tur... [more]
A0A7S3KIB0_EUPCR1.710e-539.73Hypothetical protein (Fragment) n=1 Tax=Euplotes c... [more]
A0A1I7WZ09_HETBA2.870e-560.53Ubiquitin carboxyl-terminal hydrolase n=1 Tax=Hete... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.90.70.10coord: 643..712
e-value: 5.6E-11
score: 43.9
IPR001394Peptidase C19, ubiquitin carboxyl-terminal hydrolasePFAMPF00443UCHcoord: 654..698
e-value: 3.1E-8
score: 33.4
IPR018200Ubiquitin specific protease, conserved sitePROSITEPS00972USP_1coord: 655..670
IPR028889Ubiquitin specific protease domainPROSITEPS50235USP_3coord: 654..712
score: 11.578
IPR038765Papain-like cysteine peptidase superfamilySUPERFAMILY54001Cysteine proteinasescoord: 651..689

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12665contigM-pyrifera_M_contig12665:847..4407 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12665.5365.1mRNA_M-pyrifera_M_contig12665.5365.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12665 847..4407 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12665.5365.1 ID=prot_M-pyrifera_M_contig12665.5365.1|Name=mRNA_M-pyrifera_M_contig12665.5365.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=712bp
VELESVGEEVLSDAVYLLLSLLRQSVPIKPLVSAVAHVLTLVAALTGGVA
GGARNLERHPALGSLLRALFIRVSNRSVRRAACAVLFRASYWQALGRDAS
ATAVGSGGDDEAVMGAAGVEAVVAGGAVVAATAAKSVRRAPARSNELANV
LLGSLKADLARVKTTPSARGGGGGGGHGHGPCIEGLSPVRRPRAGAARTT
DKDSGGGSIGGVGNGGGRGIGEGLVPVIVPRLHLVEVTEFVAGLVHVMLE
SARATATAGTAGAGRQLPPGGSGGDPEEVCTSAAALPLPQQQQQQPPGSR
VGATAARAPVLPVIASRDKETGLSVPGGIAPGARSVGGGGGVEGTGDSAG
CRNKESSAAAAEWLLEEAARRLAAHEFTETFKSDASDRLLVSLLHALTVA
VAGSGRRKRLAETLFSNLALASSPPPASSYSSSSKPTSSALLPRSGLIRF
LYEGCLFPPACEQEPAGEQAGSAPANGAAVAVSSGAAGSLTAGSPAATAL
PAAAAAAVAESSLGPRCKKRESRRAAFALLSALCRGEEGHLRRAFVLLGG
RDLMTRSFLESDVGDDGGESWRVATAAEASAGGHLGSGRGGGGGGGGGEG
GGGAEAVAAAAASVAATATAIAEAVALDDMSGAGSGEPWDYDPTSVLKES
GQHVGLQNQGATCYMNSLLQQLYHVPSFSLRLLGLAPDRRVDGDRKKNPL
QEEDDVLLQLQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001394Peptidase_C19_UCH
IPR018200USP_CS
IPR028889USP_dom
IPR038765Papain-like_cys_pep_sf