prot_M-pyrifera_M_contig126641.5363.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126641.5363.1
Unique Nameprot_M-pyrifera_M_contig126641.5363.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length148
Homology
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BLAST of mRNA_M-pyrifera_M_contig126641.5363.1 vs. uniprot
Match: A0A7V7EAB8_9BACT (PMT_2 domain-containing protein n=2 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7V7EAB8_9BACT)

HSP 1 Score: 144 bits (363), Expect = 5.710e-38
Identity = 78/148 (52.70%), Postives = 99/148 (66.89%), Query Frame = 0 
Query:    2 VLLAFWIPVFILTFLVGYRRPRFLFFAYPFYVLLSSVGLVGVVALLLRGRRSLLHGLXXXXXXXXXGRLSLSVVELAHQSLKTASGADVTLARRHPQWKKPTAWVKAHRSDE-AILTTTFLPVYHYVGHVDNWFPNRYTRWEYQESGL 148
            V+L+FW P+  LTFL GYRRPRF++FA+PF+V   S GLV +   + R RRS LHG          GRL+LS   L   S+KTASGADVTLARR PQW+ P  +V  H   E A+L+TT+LP  +YVG VD+WFP+R  + EY E G+
Sbjct:  302 VVLSFWAPLLALTFLYGYRRPRFMYFAFPFWVAGFSYGLVQLGIAVSRARRSWLHGCLAVIILVFGGRLALSTYHLLGDSIKTASGADVTLARRIPQWRAPCRYVGEHLDSETAVLSTTYLPALYYVGRVDDWFPSRLFQNEYWEIGM 449
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BLAST of mRNA_M-pyrifera_M_contig126641.5363.1 vs. uniprot
Match: A0A7Z9HZ92_9BACT (Uncharacterized protein n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9HZ92_9BACT)

HSP 1 Score: 102 bits (253), Expect = 2.900e-24
Identity = 48/80 (60.00%), Postives = 59/80 (73.75%), Query Frame = 0 
Query:   69 RLSLSVVELAHQSLKTASGADVTLARRHPQWKKPTAWVKAHR-SDEAILTTTFLPVYHYVGHVDNWFPNRYTRWEYQESG 147
            R+++S   LA  SL+ A GA+VTLAR+HPQW++P  WVK HR +D  ILTTTFLPV HYVG VD+W+P R   WE  ESG
Sbjct:   47 RIAVSFAALAGDSLEYAGGANVTLARKHPQWREPCTWVKEHRQADTVILTTTFLPVMHYVGEVDDWYPTRALWWEIDESG 126
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126641.5363.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A7V7EAB8_9BACT5.710e-3852.70PMT_2 domain-containing protein n=2 Tax=Candidatus... [more]
A0A7Z9HZ92_9BACT2.900e-2460.00Uncharacterized protein n=1 Tax=Candidatus Hydroge... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..48
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..148
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..18
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..18
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 55..75
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 19..27
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..1
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..54
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 2..13
NoneNo IPR availableTMHMMTMhelixcoord: 2..19
NoneNo IPR availableTMHMMTMhelixcoord: 24..46
NoneNo IPR availableTMHMMTMhelixcoord: 53..75

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126641contigM-pyrifera_M_contig126641:65..508 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126641.5363.1mRNA_M-pyrifera_M_contig126641.5363.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126641 65..508 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126641.5363.1 ID=prot_M-pyrifera_M_contig126641.5363.1|Name=mRNA_M-pyrifera_M_contig126641.5363.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=148bp
MVLLAFWIPVFILTFLVGYRRPRFLFFAYPFYVLLSSVGLVGVVALLLRG
RRSLLHGLVALLALLFLGRLSLSVVELAHQSLKTASGADVTLARRHPQWK
KPTAWVKAHRSDEAILTTTFLPVYHYVGHVDNWFPNRYTRWEYQESGL
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