prot_M-pyrifera_M_contig126622.5361.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126622.5361.1
Unique Nameprot_M-pyrifera_M_contig126622.5361.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: UPI001596536C (hybrid sensor histidine kinase/response regulator n=1 Tax=Polaromonas sp. AET17H-212 TaxID=1977061 RepID=UPI001596536C)

HSP 1 Score: 145 bits (365), Expect = 1.510e-37
Identity = 81/172 (47.09%), Postives = 108/172 (62.79%), Query Frame = 0
Query:    2 AKGLRLELDVIPVWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQ--------ASARDGTRAFGGLHVLFIDDEPDIRRGVRVLLE 165
            AKGL   +  +   V TD +LL R++RNL+ NA K+TAAG++ L  + +G+  V + VRD G GI A ++ R+F E +QIGNPERDR++GLGLGL +V RL   L L++ L S  GRGSTF + L  A+          A A+ GT  F    VL IDDEP +R G+R LLE
Sbjct:  333 AKGLAFRVTALDTEVETDPVLLERVVRNLVDNAFKYTAAGSVMLATE-SGERTVRITVRDTGAGIPAAERERIFGEFYQIGNPERDRSQGLGLGLSIVQRLARLLGLQVELDSEPGRGSTFAITLAHAARSGAASPGAPAPAKTGTPVFDAARVLVIDDEPAVRLGMRTLLE 503          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: A0A2V3TRF8_9HYPH (Histidine kinase n=3 Tax=Hyphomicrobiales TaxID=356 RepID=A0A2V3TRF8_9HYPH)

HSP 1 Score: 144 bits (364), Expect = 1.970e-37
Identity = 83/168 (49.40%), Postives = 109/168 (64.88%), Query Frame = 0
Query:    2 AKGLRLELDVIPVWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQASARDGTR-----AFGGLHVLFIDDEPDIRRGVRVLL 164
            AKGLRL     P+ V TD +LL R+LRNL+SNAV++T  G I +G +R  D  +A+ + D G GIA ED  R+F+E+ Q+GNPERDRT+GLGLGL +V R+C+ L   L L S  GRGS F + +P A++ A+  DGTR     AF    V+ IDDE  IR  +  LL
Sbjct:  321 AKGLRLRCRPCPIVVDTDPILLERVLRNLVSNAVRYTLRGGILVGCRRRADR-LAIQIWDTGIGIAPEDMDRIFQEYVQVGNPERDRTKGLGLGLAIVRRICNVLKAPLGLRSCPGRGSCFEVSVPCANE-AALTDGTRQDPPGAFIPAFVVVIDDEAPIREAMEQLL 486          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: UPI001911AC6A (Hybrid sensor histidine kinase/response regulator n=2 Tax=Bacteria TaxID=2 RepID=UPI001911AC6A)

HSP 1 Score: 144 bits (362), Expect = 3.710e-37
Identity = 89/174 (51.15%), Postives = 110/174 (63.22%), Query Frame = 0
Query:    3 KGLRLELDVIPVWVH--TDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTL--------LLPPASDQASARDGTRAFGGLHVLFIDDEPDIRRGVRVLLED 166
            +GLR  LD  P  V   TD  L+ R+LRNL  NA+KFT  G I L + RT D    +VV D GRGI   +QA VFEE +Q+ N ERDRT+GLGLGL +V RLC+ L + L LHSV G+G+T TL        LL PA  Q ++   T +F GL VL IDDE  +R G+RVLLE+
Sbjct:  317 RGLRAVLDA-PTGVRCWTDPALVLRVLRNLTENAIKFTPRGQIALRL-RTVDGMAHIVVEDTGRGIPEAEQAMVFEEFYQVDNSERDRTKGLGLGLSIVRRLCNLLGITLELHSVAGQGTTMTLKVPLETIGLLAPAQAQPAS---TESFAGLTVLVIDDERSVRMGMRVLLEE 485          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: UPI00117DF9F3 (hybrid sensor histidine kinase/response regulator n=1 Tax=Pelomonas sp. KK5 TaxID=1855730 RepID=UPI00117DF9F3)

HSP 1 Score: 141 bits (355), Expect = 2.030e-36
Identity = 88/180 (48.89%), Postives = 111/180 (61.67%), Query Frame = 0
Query:    1 VAKGLRLELDV-IPVWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALV-VRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQASARDGT-----------RAFGGLHVLFIDDEPDIRRGVRVLLEDH 167
            +AKGLRL LD     +V TD  LL R+LRNLL NA+K+TA G + + V+R  D +V  V VRD G GIA  +Q RVFEE +Q+ NPERDR RGLGLGL +  RL D L L L L S+ G GSTF+L L  A+ +A   D T           RA  GL VL +D+E  +R  ++ LL+ H
Sbjct:  315 LAKGLRLTLDCSAAAFVDTDHHLLGRLLRNLLDNALKYTARGEVAVSVRR--DGEVWRVRVRDTGCGIAPHEQGRVFEEFYQVDNPERDRARGLGLGLSICSRLADLLDLSLGLESMPGEGSTFSLGL--AAAEAPGNDSTPGESAAALLPERALAGLRVLVLDNEAPVREAMQALLQAH 490          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: A0A4R6NAB8_9BURK (Histidine kinase n=1 Tax=Kinneretia asaccharophila TaxID=582607 RepID=A0A4R6NAB8_9BURK)

HSP 1 Score: 139 bits (349), Expect = 2.590e-35
Identity = 78/168 (46.43%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    3 KGLRLELDVIP-VWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQASAR-----DGTRAFGGLHVLFIDDEPDIRRGVRVLL 164
            KGL + LD  P  WV +D +LL R++RNL+ NA+K+T  G +++  +R G+    + VRD G GIA E+QARVFEE +QIGNPERDR +GLGLGL +V RL D L L L + S  G GS F+L +  A  + + +     D T     L VL IDDE  +R  ++ LL
Sbjct:  317 KGLSIYLDCPPQAWVESDPVLLERVVRNLIDNAIKYTQQGAVYINAQRQGEV-WRVQVRDTGIGIAEEEQARVFEEFYQIGNPERDRAKGLGLGLSIVSRLVDLLDLHLEMESEAGVGSCFSLSITAAESRQAVQTPEQDDATLLLSRLRVLVIDDEDQVRGAMQTLL 483          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: A0A4Q7VWF0_9BURK (Histidine kinase n=1 Tax=Rivibacter subsaxonicus TaxID=457575 RepID=A0A4Q7VWF0_9BURK)

HSP 1 Score: 137 bits (346), Expect = 6.570e-35
Identity = 83/171 (48.54%), Postives = 110/171 (64.33%), Query Frame = 0
Query:    2 AKGLRLELDVIP-VWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPP-ASDQASARDG---TRAFGGLHVLFIDDEPDIRRGVRVLLEDH 167
            A+GL LELD+     V TD LLL RI+RNL+ NA+K+T  G + + ++  G+  + L + D GRGI   +QARVFEE +Q+GNP RDR RGLGLGL +V RL D L ++L+L S+ G G+T TL LP  A+ +A+ R       A  G  VL IDDE  +R G+  LLE H
Sbjct:  328 ARGLGLELDIEGGQHVCTDPLLLERIVRNLIDNALKYTERGQVTVRLRPIGER-LELSIADTGRGIPEHEQARVFEEFYQLGNPGRDRERGLGLGLSIVRRLADLLGIELALKSIFGSGTTVTLQLPVVAAAEAAPRPAPPSAEALRGCRVLVIDDELTVRSGMHALLESH 497          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: UPI001F4C04D7 (hybrid sensor histidine kinase/response regulator n=1 Tax=Pelomonas sp. CA6 TaxID=2907999 RepID=UPI001F4C04D7)

HSP 1 Score: 137 bits (344), Expect = 1.300e-34
Identity = 79/170 (46.47%), Postives = 106/170 (62.35%), Query Frame = 0
Query:    3 KGLRLELDVIP-VWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQASARDGTRAFGG----LHVLFIDDEPDIRRGVRVLLEDH 167
            K L L LD      + TD +LL R+LRNL+ NA+K+T  G + + V   GD    L VRD G GI  ++QAR+FEE +Q+GNPERDR++GLGLGL +V RL D + L L+L S  G+GS+F+L +P A    +AR G    G     L VL +D+E  +R  +R LLE H
Sbjct:  315 KRLSLRLDCPEQACIETDPVLLDRVLRNLIDNAIKYTTEGEVAVEVSGGGDL-WRLAVRDTGPGIPEQEQARIFEEFYQLGNPERDRSKGLGLGLSIVSRLVDLMELHLALRSAPGQGSSFSLSIPAAEFAHAARSGDAPTGPALPPLRVLVVDEEEPVRLAMRSLLESH 483          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: UPI001D00F37E (ATP-binding protein n=1 Tax=Shinella sp. XGS7 TaxID=2877941 RepID=UPI001D00F37E)

HSP 1 Score: 135 bits (341), Expect = 3.390e-34
Identity = 76/168 (45.24%), Postives = 105/168 (62.50%), Query Frame = 0
Query:    3 KGLRLELDVIP-VWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQA-----SARDGTRAFGGLHVLFIDDEPDIRRGVRVLL 164
            KGL + LD  P  WV +D +LL R++RNL+ NA+K+T  G I++  +R G+    + VRD G GIA +++ARVFEE +QIGNPERDR +GLGLGL +V RL D L L L + S  G GS F+L +  A  +       + +G +    L VL IDDE  +R  ++ LL
Sbjct:  316 KGLTIYLDCPPQAWVESDPVLLERVVRNLIDNAIKYTQQGAIYINAQRQGEL-WRVQVRDTGIGIAEDEKARVFEEFYQIGNPERDRAKGLGLGLSIVSRLVDLLDLHLEMESEFGVGSCFSLSITAAESRQPVQALGSEEGAQLLSTLRVLVIDDEDQVRSAMQTLL 482          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: A0A4Q3LJB2_9BURK (Histidine kinase n=1 Tax=Comamonadaceae bacterium TaxID=1871071 RepID=A0A4Q3LJB2_9BURK)

HSP 1 Score: 135 bits (340), Expect = 4.490e-34
Identity = 87/172 (50.58%), Postives = 109/172 (63.37%), Query Frame = 0
Query:    3 KGLRLELDVIPVWVH--TDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALV-VRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPAS-----DQASARDGTRAFGGLHVLFIDDEPDIRRGVRVLLED 166
            KGLR  LDV PV V   TD  L+ R+LRNL  NA+KFT  G I L ++   +N  AL+ V D GRGI  ++QA VFEE +Q+ NPERDRT+GLGLGL +V RLC  L + L L S  G+G+  TL LP  S        +A    ++F GL VL IDDE  +R G+RVLLE+
Sbjct:  316 KGLRPMLDV-PVGVRCWTDPALVLRVLRNLTENAIKFTQQGQITLRLRV--ENGTALISVEDTGRGIPPDEQAMVFEEFYQVDNPERDRTKGLGLGLSIVRRLCSLLGITLDLRSQGGQGTCVTLRLPLESYGLIAPPPAAPADHQSFRGLTVLVIDDERSVRLGMRVLLEE 484          
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Match: UPI00141F5983 (hybrid sensor histidine kinase/response regulator n=1 Tax=Aestuariicella hydrocarbonica TaxID=1470433 RepID=UPI00141F5983)

HSP 1 Score: 134 bits (337), Expect = 1.150e-33
Identity = 78/169 (46.15%), Postives = 108/169 (63.91%), Query Frame = 0
Query:    1 VAKGLRLELD-VIPVWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRTGDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVGRLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQASARDGT---RAFGGLHVLFIDDEPDIRRGVRVLLE 165
            + KGL++ LD     +V+TD +LL RI+RNLL+NA+K+T  G I L V+    N V L ++D GRGI  E+Q  VFEE +Q+ NPERD T+GLGLGL +V RL D L L LS+ S+ G G+ FT+ LP +S     +  T    ++  L  L IDDE ++  G++ LLE
Sbjct:  315 INKGLKVWLDCAADAFVNTDEILLERIVRNLLANAIKYTERGRIELCVEHKY-NKVVLTIKDSGRGIPLEEQDHVFEEFYQLHNPERDHTKGLGLGLAIVKRLADLLELDLSMDSMIGSGTVFTMCLPASSVMPQTQRPTVNNLSWDSLCALVIDDEHEVGLGMKALLE 482          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126622.5361.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
UPI001596536C1.510e-3747.09hybrid sensor histidine kinase/response regulator ... [more]
A0A2V3TRF8_9HYPH1.970e-3749.40Histidine kinase n=3 Tax=Hyphomicrobiales TaxID=35... [more]
UPI001911AC6A3.710e-3751.15Hybrid sensor histidine kinase/response regulator ... [more]
UPI00117DF9F32.030e-3648.89hybrid sensor histidine kinase/response regulator ... [more]
A0A4R6NAB8_9BURK2.590e-3546.43Histidine kinase n=1 Tax=Kinneretia asaccharophila... [more]
A0A4Q7VWF0_9BURK6.570e-3548.54Histidine kinase n=1 Tax=Rivibacter subsaxonicus T... [more]
UPI001F4C04D71.300e-3446.47hybrid sensor histidine kinase/response regulator ... [more]
UPI001D00F37E3.390e-3445.24ATP-binding protein n=1 Tax=Shinella sp. XGS7 TaxI... [more]
A0A4Q3LJB2_9BURK4.490e-3450.58Histidine kinase n=1 Tax=Comamonadaceae bacterium ... [more]
UPI00141F59831.150e-3346.15hybrid sensor histidine kinase/response regulator ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004358Signal transduction histidine kinase-related protein, C-terminalPRINTSPR00344BCTRLSENSORcoord: 55..69
score: 39.86
coord: 73..83
score: 24.33
coord: 114..127
score: 43.53
coord: 90..108
score: 32.22
IPR003594Histidine kinase/HSP90-like ATPaseSMARTSM00387HKATPase_4coord: 18..130
e-value: 4.9E-26
score: 102.5
IPR003594Histidine kinase/HSP90-like ATPasePFAMPF02518HATPase_ccoord: 19..128
e-value: 5.3E-20
score: 72.0
IPR036890Histidine kinase/HSP90-like ATPase superfamilyGENE3D3.30.565.10coord: 2..138
e-value: 1.0E-30
score: 108.2
IPR036890Histidine kinase/HSP90-like ATPase superfamilySUPERFAMILY55874ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinasecoord: 8..127
NoneNo IPR availablePANTHERPTHR43047TWO-COMPONENT HISTIDINE PROTEIN KINASEcoord: 2..165
NoneNo IPR availablePANTHERPTHR43047:SF9coord: 2..165
IPR005467Histidine kinase domainPROSITEPS50109HIS_KINcoord: 1..130
score: 27.432

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126622contigM-pyrifera_M_contig126622:5..505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126622.5361.1mRNA_M-pyrifera_M_contig126622.5361.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126622 5..505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126622.5361.1 ID=prot_M-pyrifera_M_contig126622.5361.1|Name=mRNA_M-pyrifera_M_contig126622.5361.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
VAKGLRLELDVIPVWVHTDRLLLSRILRNLLSNAVKFTAAGTIFLGVKRT
GDNDVALVVRDEGRGIAAEDQARVFEEHFQIGNPERDRTRGLGLGLFVVG
RLCDTLSLKLSLHSVTGRGSTFTLLLPPASDQASARDGTRAFGGLHVLFI
DDEPDIRRGVRVLLEDH
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR004358Sig_transdc_His_kin-like_C
IPR003594HATPase_C
IPR036890HATPase_C_sf
IPR005467His_kinase_dom