prot_M-pyrifera_M_contig1266.5353.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig1266.5353.1
Unique Nameprot_M-pyrifera_M_contig1266.5353.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length54
Homology
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: D8LTW6_ECTSI (40S ribosomal protein S25 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTW6_ECTSI)

HSP 1 Score: 100 bits (248), Expect = 4.110e-26
Identity = 52/53 (98.11%), Postives = 52/53 (98.11%), Query Frame = 0
Query:    1 MKLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVEE 53
            MKLITASGLVERLKVNGSLARAAIRELE KGLIRKVDAHHAQVIYTRATNVEE
Sbjct:   58 MKLITASGLVERLKVNGSLARAAIRELEEKGLIRKVDAHHAQVIYTRATNVEE 110          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: A0A835ZCY0_9STRA (40S ribosomal protein S25 n=2 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCY0_9STRA)

HSP 1 Score: 80.1 bits (196), Expect = 3.330e-18
Identity = 39/52 (75.00%), Postives = 45/52 (86.54%), Query Frame = 0
Query:    1 MKLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVE 52
            MKL+T S LVERLK+NGSLARAAIRELE KG+IR+V  H AQ++YTRATN E
Sbjct:   58 MKLVTTSALVERLKINGSLARAAIRELEEKGVIRRVSHHSAQLVYTRATNTE 109          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: W7TVF9_9STRA (40S ribosomal protein S25 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TVF9_9STRA)

HSP 1 Score: 75.5 bits (184), Expect = 2.270e-16
Identity = 37/52 (71.15%), Postives = 43/52 (82.69%), Query Frame = 0
Query:    2 KLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVEE 53
            KLIT S LVERLK+NGSLARAA+REL+ KGLI+ V  HH+Q+IYTRAT   E
Sbjct:   60 KLITPSALVERLKINGSLARAALRELKEKGLIKPVSVHHSQIIYTRATAAAE 111          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: A0A2D4BEC3_PYTIN (40S ribosomal protein S25 n=3 Tax=Pythium TaxID=4797 RepID=A0A2D4BEC3_PYTIN)

HSP 1 Score: 75.5 bits (184), Expect = 2.330e-16
Identity = 38/53 (71.70%), Postives = 46/53 (86.79%), Query Frame = 0
Query:    1 MKLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVEE 53
            MKLI+AS +VERLKVN +LARA+I ELE KGLI+KV +HHAQ+IYTRAT  +E
Sbjct:   59 MKLISASAIVERLKVNAALARASIHELEEKGLIQKVLSHHAQLIYTRATAAQE 111          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: A0A7S3PJ15_9STRA (40S ribosomal protein S25 n=1 Tax=Aplanochytrium stocchinoi TaxID=215587 RepID=A0A7S3PJ15_9STRA)

HSP 1 Score: 74.3 bits (181), Expect = 6.000e-16
Identity = 40/50 (80.00%), Postives = 42/50 (84.00%), Query Frame = 0
Query:    1 MKLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATN 50
            MKLIT S +VERLKV GSLARAAIRELEGKGLIR+V  H  Q IYTRATN
Sbjct:   58 MKLITPSTIVERLKVTGSLARAAIRELEGKGLIREVLNHRKQRIYTRATN 107          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: A8E6C7_9BILA (40S ribosomal protein S25 n=1 Tax=Spadella cephaloptera TaxID=52888 RepID=A8E6C7_9BILA)

HSP 1 Score: 73.9 bits (180), Expect = 1.020e-15
Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 0
Query:    2 KLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRAT 49
            KLIT S + ERLK+ GSLARAA++ELE KGLI+KVDAHHAQ+IYTR T
Sbjct:   60 KLITPSVVSERLKIRGSLARAALKELESKGLIKKVDAHHAQIIYTRNT 107          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: M4BE44_HYAAE (40S ribosomal protein S25 n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BE44_HYAAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.410e-15
Identity = 38/53 (71.70%), Postives = 42/53 (79.25%), Query Frame = 0
Query:    1 MKLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVEE 53
            MKLITAS +VERLKVN +LARA+I ELE  G I KV  HHAQ+IYTRA  VEE
Sbjct:   42 MKLITASAIVERLKVNAALARASIHELEENGSISKVLGHHAQLIYTRAVAVEE 94          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: A0A0P5BXG7_9CRUS (40S ribosomal protein S25 n=1 Tax=Daphnia magna TaxID=35525 RepID=A0A0P5BXG7_9CRUS)

HSP 1 Score: 72.4 bits (176), Expect = 2.670e-15
Identity = 38/53 (71.70%), Postives = 45/53 (84.91%), Query Frame = 0
Query:    1 MKLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVEE 53
            MKLI+AS +VERLKV  SLARA+IREL  KGLI+KV +HHAQ+IYTRA+  EE
Sbjct:   46 MKLISASAVVERLKVTASLARASIRELTEKGLIQKVLSHHAQLIYTRASAQEE 98          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: A0A0L0H464_SPIPD (40S ribosomal protein S25 n=2 Tax=Spizellomyces TaxID=4815 RepID=A0A0L0H464_SPIPD)

HSP 1 Score: 72.4 bits (176), Expect = 4.880e-15
Identity = 35/52 (67.31%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    2 KLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVEE 53
            KL+T S LV+RL++NGSLAR AIRELE KGLIR VD H++Q+IYTRAT  ++
Sbjct:   56 KLVTPSVLVDRLRINGSLARIAIRELEAKGLIRLVDHHNSQLIYTRATKADD 107          
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Match: A0A507DYN8_9FUNG (40S ribosomal protein S25 n=1 Tax=Powellomyces hirtus TaxID=109895 RepID=A0A507DYN8_9FUNG)

HSP 1 Score: 73.2 bits (178), Expect = 5.870e-15
Identity = 36/52 (69.23%), Postives = 44/52 (84.62%), Query Frame = 0
Query:    2 KLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATNVEE 53
            KLIT S LV+RL++NGSLAR AIRELE KGLIR V +H++Q+IYTRAT  E+
Sbjct:   98 KLITPSVLVDRLRINGSLARVAIRELESKGLIRLVSSHNSQLIYTRATKAED 149          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig1266.5353.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LTW6_ECTSI4.110e-2698.1140S ribosomal protein S25 n=2 Tax=Ectocarpus TaxID... [more]
A0A835ZCY0_9STRA3.330e-1875.0040S ribosomal protein S25 n=2 Tax=Tribonema minus ... [more]
W7TVF9_9STRA2.270e-1671.1540S ribosomal protein S25 n=2 Tax=Monodopsidaceae ... [more]
A0A2D4BEC3_PYTIN2.330e-1671.7040S ribosomal protein S25 n=3 Tax=Pythium TaxID=47... [more]
A0A7S3PJ15_9STRA6.000e-1680.0040S ribosomal protein S25 n=1 Tax=Aplanochytrium s... [more]
A8E6C7_9BILA1.020e-1575.0040S ribosomal protein S25 n=1 Tax=Spadella cephalo... [more]
M4BE44_HYAAE2.410e-1571.7040S ribosomal protein S25 n=1 Tax=Hyaloperonospora... [more]
A0A0P5BXG7_9CRUS2.670e-1571.7040S ribosomal protein S25 n=1 Tax=Daphnia magna Ta... [more]
A0A0L0H464_SPIPD4.880e-1567.3140S ribosomal protein S25 n=2 Tax=Spizellomyces Ta... [more]
A0A507DYN8_9FUNG5.870e-1569.2340S ribosomal protein S25 n=1 Tax=Powellomyces hir... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036388Winged helix-like DNA-binding domain superfamilyGENE3D1.10.10.10coord: 1..52
e-value: 9.7E-23
score: 81.7
IPR004977Ribosomal protein S25PFAMPF03297Ribosomal_S25coord: 1..48
e-value: 8.4E-19
score: 67.7
IPR004977Ribosomal protein S25PANTHERPTHR12850FAMILY NOT NAMEDcoord: 1..50
NoneNo IPR availablePANTHERPTHR12850:SF5RIBOSOMAL PROTEIN S25coord: 1..50
NoneNo IPR availablePRODOMPD012268coord: 1..50
e-value: 2.0E-12
score: 168.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig1266contigM-pyrifera_M_contig1266:2238..2399 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig1266.5353.1mRNA_M-pyrifera_M_contig1266.5353.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig1266 1265..3100 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig1266.5353.1 ID=prot_M-pyrifera_M_contig1266.5353.1|Name=mRNA_M-pyrifera_M_contig1266.5353.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=54bp
MKLITASGLVERLKVNGSLARAAIRELEGKGLIRKVDAHHAQVIYTRATN
VEE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036388WH-like_DNA-bd_sf
IPR004977Ribosomal_S25