prot_M-pyrifera_M_contig12649.5344.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12649.5344.1
Unique Nameprot_M-pyrifera_M_contig12649.5344.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
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BLAST of mRNA_M-pyrifera_M_contig12649.5344.1 vs. uniprot
Match: D7FXB3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXB3_ECTSI)

HSP 1 Score: 80.9 bits (198), Expect = 1.330e-16
Identity = 37/55 (67.27%), Postives = 46/55 (83.64%), Query Frame = 0 
Query:    1 MLDPPHVDVAAISAVQAAFARGFPFQKHGRKFEETSVRSSLKDLMVSDGPARLIG 55
            MLDPP VD++AI+ VQAAFAR F F KHG KF + SVRSSLK++++S+GP RLIG
Sbjct:  266 MLDPPKVDMSAIATVQAAFARNFSFHKHGEKFTDISVRSSLKNIIMSEGPGRLIG 320
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BLAST of mRNA_M-pyrifera_M_contig12649.5344.1 vs. uniprot
Match: A0A6H5K524_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K524_9PHAE)

HSP 1 Score: 78.6 bits (192), Expect = 1.200e-15
Identity = 36/55 (65.45%), Postives = 45/55 (81.82%), Query Frame = 0 
Query:    1 MLDPPHVDVAAISAVQAAFARGFPFQKHGRKFEETSVRSSLKDLMVSDGPARLIG 55
            MLDPP V ++AI+ VQAAFAR F F KHG KF++ SVRSSLK+++ S+GP RLIG
Sbjct:  350 MLDPPKVGMSAIATVQAAFARNFAFHKHGEKFKDISVRSSLKNIITSEGPGRLIG 404
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12649.5344.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
D7FXB3_ECTSI1.330e-1667.27Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5K524_9PHAE1.200e-1565.45Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12649contigM-pyrifera_M_contig12649:229..3434 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12649.5344.1mRNA_M-pyrifera_M_contig12649.5344.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12649 229..3461 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12649.5344.1 ID=prot_M-pyrifera_M_contig12649.5344.1|Name=mRNA_M-pyrifera_M_contig12649.5344.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
MLDPPHVDVAAISAVQAAFARGFPFQKHGRKFEETSVRSSLKDLMVSDGP
ARLIG*
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