prot_M-pyrifera_M_contig126487.5342.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig126487.5342.1
Unique Name	prot_M-pyrifera_M_contig126487.5342.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	169

Homology

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: UPI001CAA52E2 (RHS repeat-associated core domain-containing protein n=1 Tax=Halomonas sp. ANAO-440 TaxID=2861360 RepID=UPI001CAA52E2)

HSP 1 Score: 322 bits (825), Expect = 4.440e-106
Identity = 158/169 (93.49%), Postives = 163/169 (96.45%), Query Frame = 0

Query:    1 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRL+GQQAL+DNRLGQLNGTRYRYDGAGNLIER QPNGERLTLGYDG NRLVHL HASELG TREA+YRYDGLGRRISKTVR TNGTTATTHYGWDGDRIVREE D+QRTTVVYEPGSFVPMLRIDDT+QGQVLSAYITDA
Sbjct:   89 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLDGQQALTDNRLGQLNGTRYRYDGAGNLIERQQPNGERLTLGYDGANRLVHLTHASELGYTREASYRYDGLGRRISKTVRDTNGTTATTHYGWDGDRIVREENDSQRTTVVYEPGSFVPMLRIDDTQQGQVLSAYITDA 257

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: UPI001FCCAF73 (DUF6531 domain-containing protein n=1 Tax=Halomonas alkaliantarctica TaxID=232346 RepID=UPI001FCCAF73)

HSP 1 Score: 334 bits (857), Expect = 9.960e-105
Identity = 164/169 (97.04%), Postives = 166/169 (98.22%), Query Frame = 0

Query:    1 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNL ER QPNGERLTLGYDG NRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETD+QRTTVVYEPGSFVPMLRIDDTEQGQ+LSAYITDA
Sbjct:  807 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNLTERQQPNGERLTLGYDGANRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDSQRTTVVYEPGSFVPMLRIDDTEQGQILSAYITDA 975

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: UPI001BE7D210 (RHS repeat-associated core domain-containing protein n=1 Tax=Halomonas sp. ISL-56 TaxID=2819149 RepID=UPI001BE7D210)

HSP 1 Score: 308 bits (788), Expect = 2.650e-101
Identity = 154/172 (89.53%), Postives = 158/172 (91.86%), Query Frame = 0

Query:    1 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLE---GQQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            AYSYDAAGRLIGSQHGD+AHRYSVDAAGNRLE    QQ L DN L QLNG RYRYDGAGNL+ER QPNGERLTLGYDG NRLVHLIHASELG TREATYRYDGLGR ISKTV HTNGTTATTHYGWDGDRIVREETD+QRTTVVYEPGSFVPMLRIDDT+QGQVLSAYITDA
Sbjct:   37 AYSYDAAGRLIGSQHGDNAHRYSVDAAGNRLEQKNNQQPLPDNHLTQLNGARYRYDGAGNLVERQQPNGERLTLGYDGANRLVHLIHASELGYTREATYRYDGLGRHISKTVHHTNGTTATTHYGWDGDRIVREETDDQRTTVVYEPGSFVPMLRIDDTQQGQVLSAYITDA 208

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: UPI001CBA42EA (RHS repeat-associated core domain-containing protein n=2 Tax=Halomonas TaxID=2745 RepID=UPI001CBA42EA)

HSP 1 Score: 306 bits (785), Expect = 3.260e-101
Identity = 153/173 (88.44%), Postives = 161/173 (93.06%), Query Frame = 0

Query:    1 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEG----QQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            AYS+DAAGRL GSQHGD+AHRYSVDAAGNRLE     QQ L+DNRL QLNGTRYRYDG GNL+ER QPNGERLTLGYDG NRLVHLI+ASELGATREATYRYDGLGRRISKTVR TNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDT+QGQ++SAYITDA
Sbjct:   16 AYSFDAAGRLTGSQHGDNAHRYSVDAAGNRLEQGVDKQQGLTDNRLTQLNGTRYRYDGTGNLVERQQPNGERLTLGYDGANRLVHLIYASELGATREATYRYDGLGRRISKTVRDTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTQQGQLVSAYITDA 188

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: A0A6B8QPZ7_9GAMM (RHS repeat protein n=1 Tax=Halomonas sp. PA16-9 TaxID=2576841 RepID=A0A6B8QPZ7_9GAMM)

HSP 1 Score: 318 bits (815), Expect = 5.950e-101
Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 0

Query:    9 RLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            RLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNL ER QPNGERLTLGYDG NRLV LIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTV+YEPGSFVPMLRIDDTEQGQVLSAYITDA
Sbjct:  456 RLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNLTERQQPNGERLTLGYDGANRLVQLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVIYEPGSFVPMLRIDDTEQGQVLSAYITDA 616

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: UPI001CC2669E (DUF6531 domain-containing protein n=1 Tax=Halomonas titanicae TaxID=664683 RepID=UPI001CC2669E)

HSP 1 Score: 320 bits (821), Expect = 1.690e-99
Identity = 161/173 (93.06%), Postives = 163/173 (94.22%), Query Frame = 0

Query:    1 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEG----QQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLE     QQ L+DNRL QLNGTRYRYDGAGNLIER QPNGERLTLGYDG NRLVHLIHASELGATREATYRYDGLGRRISKTVRH NGTTATTHYGWDGDRIVREETDNQRTT+VYEPGSFVPMLRIDDTEQGQVLSAYITDA
Sbjct:  823 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEQGVDKQQGLTDNRLTQLNGTRYRYDGAGNLIERQQPNGERLTLGYDGANRLVHLIHASELGATREATYRYDGLGRRISKTVRHPNGTTATTHYGWDGDRIVREETDNQRTTMVYEPGSFVPMLRIDDTEQGQVLSAYITDA 995

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: UPI001D0A35A4 (hypothetical protein n=1 Tax=Halomonas sp. FeN2 TaxID=2832500 RepID=UPI001D0A35A4)

HSP 1 Score: 318 bits (815), Expect = 3.920e-99
Identity = 158/173 (91.33%), Postives = 163/173 (94.22%), Query Frame = 0

Query:    1 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEG----QQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLE     QQ L+DNRL QLNG RYRYDGAGNL+ER QPNGERLTLGYDG NRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDT+QGQ++SAYITDA
Sbjct:  722 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEQGVDKQQGLTDNRLTQLNGARYRYDGAGNLVERQQPNGERLTLGYDGANRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTQQGQLVSAYITDA 894

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: A0A4R7YSG7_9GAMM (YD repeat-containing protein n=3 Tax=Halomonas TaxID=2745 RepID=A0A4R7YSG7_9GAMM)

HSP 1 Score: 300 bits (767), Expect = 9.990e-99
Identity = 149/164 (90.85%), Postives = 152/164 (92.68%), Query Frame = 0

Query:   10 LIGSQHGDHAHRYSVDAAGNRLEG----QQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            LIGSQHGDHAHRYSVDAAGNRLE     QQ L+DNRL QLNGTRYRYDGAGNL+ER QPNGERLTLGYDG NRLVHLIH SELGATRE TYRYDGLGRRISKTVRH NGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDT+QGQVLSAYITDA
Sbjct:  182 LIGSQHGDHAHRYSVDAAGNRLEQGVDKQQGLTDNRLTQLNGTRYRYDGAGNLVERQQPNGERLTLGYDGANRLVHLIHVSELGATREVTYRYDGLGRRISKTVRHPNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTKQGQVLSAYITDA 345

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: UPI001FCB1953 (DUF6531 domain-containing protein n=2 Tax=Halomonas TaxID=2745 RepID=UPI001FCB1953)

HSP 1 Score: 318 bits (815), Expect = 1.330e-98
Identity = 156/161 (96.89%), Postives = 157/161 (97.52%), Query Frame = 0

Query:    9 RLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            RLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNL ER QPNGERLTLGYDG NRLV LIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTV+YEPGSFVPMLRIDDTEQGQVLSAYITDA
Sbjct:  832 RLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRYRYDGAGNLTERQQPNGERLTLGYDGANRLVQLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVIYEPGSFVPMLRIDDTEQGQVLSAYITDA 992

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BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Match: A0A7H1VFN8_9GAMM (Type VI secretion system tip protein VgrG n=2 Tax=Halomonas TaxID=2745 RepID=A0A7H1VFN8_9GAMM)

HSP 1 Score: 320 bits (821), Expect = 2.210e-98
Identity = 161/173 (93.06%), Postives = 163/173 (94.22%), Query Frame = 0

Query:    1 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEG----QQALSDNRLGQLNGTRYRYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDGLGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPMLRIDDTEQGQVLSAYITDA 169
            AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLE     QQ L+DNRL QLNGTRYRYDGAGNLIER QPNGERLTLGYDG NRLVHLIHASELGATREATYRYDGLGRRISKTVRH NGTTATTHYGWDGDRIVREETDNQRTT+VYEPGSFVPMLRIDDTEQGQVLSAYITDA
Sbjct: 1528 AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEQGVDKQQGLTDNRLTQLNGTRYRYDGAGNLIERQQPNGERLTLGYDGANRLVHLIHASELGATREATYRYDGLGRRISKTVRHPNGTTATTHYGWDGDRIVREETDNQRTTMVYEPGSFVPMLRIDDTEQGQVLSAYITDA 1700

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig126487.5342.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001CAA52E2	4.440e-106	93.49	RHS repeat-associated core domain-containing prote...	[more]
UPI001FCCAF73	9.960e-105	97.04	DUF6531 domain-containing protein n=1 Tax=Halomona...	[more]
UPI001BE7D210	2.650e-101	89.53	RHS repeat-associated core domain-containing prote...	[more]
UPI001CBA42EA	3.260e-101	88.44	RHS repeat-associated core domain-containing prote...	[more]
A0A6B8QPZ7_9GAMM	5.950e-101	96.89	RHS repeat protein n=1 Tax=Halomonas sp. PA16-9 Ta...	[more]
UPI001CC2669E	1.690e-99	93.06	DUF6531 domain-containing protein n=1 Tax=Halomona...	[more]
UPI001D0A35A4	3.920e-99	91.33	hypothetical protein n=1 Tax=Halomonas sp. FeN2 Ta...	[more]
A0A4R7YSG7_9GAMM	9.990e-99	90.85	YD repeat-containing protein n=3 Tax=Halomonas Tax...	[more]
UPI001FCB1953	1.330e-98	96.89	DUF6531 domain-containing protein n=2 Tax=Halomona...	[more]
A0A7H1VFN8_9GAMM	2.210e-98	93.06	Type VI secretion system tip protein VgrG n=2 Tax=...	[more]

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InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.180.10.10		coord: 1..166 e-value: 4.2E-10 score: 41.1
None	No IPR available	PANTHER	PTHR32305	FAMILY NOT NAMED	coord: 2..160
None	No IPR available	PANTHER	PTHR32305:SF15	PROTEIN RHSA-RELATED	coord: 2..160
IPR031325	RHS repeat	PFAM	PF05593	RHS_repeat	coord: 52..85 e-value: 6.7E-7 score: 29.7 coord: 25..67 e-value: 4.3E-5 score: 23.9
IPR006530	YD repeat	TIGRFAM	TIGR01643	TIGR01643	coord: 52..80 e-value: 1.5E-5 score: 23.3 coord: 73..109 e-value: 0.0023 score: 16.4 coord: 48..68 e-value: 2.6E-4 score: 19.4 coord: 4..32 e-value: 6.7E-5 score: 21.3

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig126487	contig	M-pyrifera_M_contig126487:3..509 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig126487.5342.1	mRNA_M-pyrifera_M_contig126487.5342.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig126487 3..509 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig126487.5342.1 ID=prot_M-pyrifera_M_contig126487.5342.1|Name=mRNA_M-pyrifera_M_contig126487.5342.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=169bp
AYSYDAAGRLIGSQHGDHAHRYSVDAAGNRLEGQQALSDNRLGQLNGTRY
RYDGAGNLIERHQPNGERLTLGYDGDNRLVHLIHASELGATREATYRYDG
LGRRISKTVRHTNGTTATTHYGWDGDRIVREETDNQRTTVVYEPGSFVPM
LRIDDTEQGQVLSAYITDA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR031325	RHS_repeat
IPR006530	YD