prot_M-pyrifera_M_contig126456.5329.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126456.5329.1
Unique Nameprot_M-pyrifera_M_contig126456.5329.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length108
Homology
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A3M1KP64_9DELT (Uncharacterized protein n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A3M1KP64_9DELT)

HSP 1 Score: 56.6 bits (135), Expect = 4.780e-7
Identity = 28/54 (51.85%), Postives = 36/54 (66.67%), Query Frame = 0
Query:   23 MSGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSSARPK 76
            + GD FG  +  +GDVDGDG PDLAVG+PG DDGG +D G + ++L  S    K
Sbjct:  169 LDGDQFGAALARLGDVDGDGVPDLAVGAPGDDDGG-DDRGAVWILLLESDGTVK 221          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A5R9E1G2_9ACTN (Uncharacterized protein n=1 Tax=Streptomyces marianii TaxID=1817406 RepID=A0A5R9E1G2_9ACTN)

HSP 1 Score: 55.5 bits (132), Expect = 1.190e-6
Identity = 26/66 (39.39%), Postives = 47/66 (71.21%), Query Frame = 0
Query:    7 RVLEQGSSDLDAADAPMSGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSS 72
            R + QG+ ++ ++ +P +GD FG+ +  +GD++GDG  DLA+G+PG+D  GVE +G + V+  T++
Sbjct:  352 RTITQGTDNIPSSASP-NGDRFGYSLS-LGDINGDGKADLAIGTPGKDINGVEGTGAVTVLYGTAA 415          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A7Z0PUN7_9ACTN (VCBS repeat-containing protein n=2 Tax=Streptomyces TaxID=1883 RepID=A0A7Z0PUN7_9ACTN)

HSP 1 Score: 55.1 bits (131), Expect = 1.620e-6
Identity = 37/107 (34.58%), Postives = 57/107 (53.27%), Query Frame = 0
Query:    2 GFSRVRVLEQGSSDLDAADAPMSGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSSARPKPGWWQIGATSARWQVPGSIQ--NWIGVSHKLE 106
            G  RV+ + QG+  +        GD FG  ++ +GD+DGDG+ DLAVG+PG D G ++DSG + V+    +     G       +A   VPG+ +  +W G   KL+
Sbjct:  326 GTGRVQAVGQGTPGVPGT--AEDGDRFGSSVD-LGDIDGDGYLDLAVGAPGEDVGTLKDSGSVVVLRGGPAGLTTTGARTFHQDTAG--VPGTAEAYDWFGTDVKLD 427          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A1A9BY72_9ACTN (FG-GAP repeat-containing protein n=1 Tax=Streptomyces sp. DI166 TaxID=1839783 RepID=A0A1A9BY72_9ACTN)

HSP 1 Score: 54.3 bits (129), Expect = 2.980e-6
Identity = 40/109 (36.70%), Postives = 53/109 (48.62%), Query Frame = 0
Query:    2 GFSRVRVLEQGSSDLDAADAPMSGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSSARPKPGWWQIGATSARW---QVPGSIQNWIGVSHKLEL 107
            G S   +  Q SS +  A +P + D FG+ +   GDVDGDG+ DLAVG P  D GG ED GG+ +       R  PG   +  T + W    V G  Q +    H + L
Sbjct:  301 GPSGSMMYNQASSGV--AGSPEADDNFGYALA-AGDVDGDGYADLAVGVPHEDVGGNEDQGGVTLF------RGGPG--GLTGTRSSWIPQTVTGPAQEYAAFGHTVRL 398          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: UPI00164F080B (FG-GAP-like repeat-containing protein n=1 Tax=Actinomadura alba TaxID=406431 RepID=UPI00164F080B)

HSP 1 Score: 53.9 bits (128), Expect = 4.110e-6
Identity = 36/106 (33.96%), Postives = 56/106 (52.83%), Query Frame = 0
Query:    2 GFSRVRVLEQGSSDLDAADAPMSGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSSARPKPGWWQIGATSARWQVPGSIQNWIGVSHKLEL 107
            GF R  ++ Q +S +        GD FG  +  +GD++GDG  D+A+G+PG D G V D+G   V+  T+S     G  QIG  +A   VPG+ +      ++L +
Sbjct:  310 GFRRQLLVTQDTSGVPGTGE--QGDGFGAGLA-VGDLNGDGKGDVAIGAPGEDIGTVADAGAFTVLYGTASGVTTAGAQQIGQNTA--DVPGNAETRDAFGYELSV 410          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A124I6S8_9ACTN (Uncharacterized protein n=4 Tax=Streptomyces TaxID=1883 RepID=A0A124I6S8_9ACTN)

HSP 1 Score: 52.8 bits (125), Expect = 1.050e-5
Identity = 27/65 (41.54%), Postives = 43/65 (66.15%), Query Frame = 0
Query:    8 VLEQGSSDLDAADAPMSGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSS 72
             LEQ SS +       +GD FG+ +  +GD++GDG+ DLA+GSPG D  G+ D+G ++V+  ++S
Sbjct:  327 TLEQNSSGIPGTSE--TGDAFGWELS-LGDINGDGYDDLAIGSPGEDLNGIADAGMVSVLYGSTS 388          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A3M0ZGQ1_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Candidatus Dadabacteria bacterium TaxID=2080303 RepID=A0A3M0ZGQ1_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 1.080e-5
Identity = 26/53 (49.06%), Postives = 35/53 (66.04%), Query Frame = 0
Query:   24 SGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSSARPK 76
            +GD FG  + G+GD+DGDG  DLAVG+PG DDGG  D GG+ ++   +    K
Sbjct:  124 NGDRFGAAVAGVGDLDGDGIGDLAVGAPGDDDGGT-DRGGLWILWLNADGTVK 175          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A7C5AE15_9BACT (Peptidase_S8 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7C5AE15_9BACT)

HSP 1 Score: 52.8 bits (125), Expect = 1.120e-5
Identity = 28/66 (42.42%), Postives = 39/66 (59.09%), Query Frame = 0
Query:    1 MGFSRVRVLEQGSSDLDAADAPMSGDTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAV 66
            + +     L+  S+ L   DAP+S D +G  + G+GDVDGDG  D AVG P  D GG+ D+G + V
Sbjct:  547 VAWQAALTLQDPSTVLFRQDAPLSEDLYGTALAGLGDVDGDGIEDFAVGVPSDDQGGL-DAGAVVV 611          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A3B0Z0Y4_9ZZZZ (Uncharacterized protein n=1 Tax=hydrothermal vent metagenome TaxID=652676 RepID=A0A3B0Z0Y4_9ZZZZ)

HSP 1 Score: 51.2 bits (121), Expect = 3.610e-5
Identity = 25/44 (56.82%), Postives = 31/44 (70.45%), Query Frame = 0
Query:   26 DTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILF 69
            D FG  + GIGD+DGDG PDL VG+PG DDGG+ D G + V+  
Sbjct:  413 DQFGAAVAGIGDLDGDGVPDLVVGAPGDDDGGL-DRGAVWVLFL 455          
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Match: A0A4R1HDF6_9GAMM (FG-GAP repeat protein n=1 Tax=Thiogranum longum TaxID=1537524 RepID=A0A4R1HDF6_9GAMM)

HSP 1 Score: 50.8 bits (120), Expect = 4.930e-5
Identity = 26/49 (53.06%), Postives = 32/49 (65.31%), Query Frame = 0
Query:   26 DTFGFVMEGIGDVDGDGWPDLAVGSPGRDDGGVEDSGGIAVILFTSSAR 74
            D FG  + GIGD+D DG PDLA+G+PG DDGG  D G I V+   +  R
Sbjct:  277 DQFGASVAGIGDLDNDGIPDLAIGAPGGDDGGT-DRGEIWVVFLDADGR 324          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126456.5329.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 18
Match NameE-valueIdentityDescription
A0A3M1KP64_9DELT4.780e-751.85Uncharacterized protein n=1 Tax=Deltaproteobacteri... [more]
A0A5R9E1G2_9ACTN1.190e-639.39Uncharacterized protein n=1 Tax=Streptomyces maria... [more]
A0A7Z0PUN7_9ACTN1.620e-634.58VCBS repeat-containing protein n=2 Tax=Streptomyce... [more]
A0A1A9BY72_9ACTN2.980e-636.70FG-GAP repeat-containing protein n=1 Tax=Streptomy... [more]
UPI00164F080B4.110e-633.96FG-GAP-like repeat-containing protein n=1 Tax=Acti... [more]
A0A124I6S8_9ACTN1.050e-541.54Uncharacterized protein n=4 Tax=Streptomyces TaxID... [more]
A0A3M0ZGQ1_9BACT1.080e-549.06Uncharacterized protein (Fragment) n=1 Tax=Candida... [more]
A0A7C5AE15_9BACT1.120e-542.42Peptidase_S8 domain-containing protein n=1 Tax=Pla... [more]
A0A3B0Z0Y4_9ZZZZ3.610e-556.82Uncharacterized protein n=1 Tax=hydrothermal vent ... [more]
A0A4R1HDF6_9GAMM4.930e-553.06FG-GAP repeat protein n=1 Tax=Thiogranum longum Ta... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013519Integrin alpha beta-propellorSMARTSM00191int_alpha_rptcoord: 24..78
e-value: 8.7E-4
score: 28.6
IPR013519Integrin alpha beta-propellorPROSITEPS51470FG_GAPcoord: 14..76
score: 10.428
IPR013517FG-GAP repeatPFAMPF01839FG-GAPcoord: 35..57
e-value: 3.1E-5
score: 24.0
IPR028994Integrin alpha, N-terminalGENE3D2.130.10.130coord: 3..87
e-value: 8.6E-9
score: 37.0
NoneNo IPR availableSUPERFAMILY69318Integrin alpha N-terminal domaincoord: 21..88

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126456contigM-pyrifera_M_contig126456:17..340 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126456.5329.1mRNA_M-pyrifera_M_contig126456.5329.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126456 17..346 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126456.5329.1 ID=prot_M-pyrifera_M_contig126456.5329.1|Name=mRNA_M-pyrifera_M_contig126456.5329.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=108bp
MGFSRVRVLEQGSSDLDAADAPMSGDTFGFVMEGIGDVDGDGWPDLAVGS
PGRDDGGVEDSGGIAVILFTSSARPKPGWWQIGATSARWQVPGSIQNWIG
VSHKLELG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013519Int_alpha_beta-p
IPR013517FG-GAP
IPR028994Integrin_alpha_N