prot_M-pyrifera_M_contig126376.5317.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126376.5317.1
Unique Nameprot_M-pyrifera_M_contig126376.5317.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length56
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig126376.5317.1 vs. uniprot
Match: UPI000D699D6B (GNAT family N-acetyltransferase n=1 Tax=Nocardioides speluncae TaxID=2670337 RepID=UPI000D699D6B)

HSP 1 Score: 54.7 bits (130), Expect = 9.570e-8
Identity = 25/45 (55.56%), Postives = 32/45 (71.11%), Query Frame = 0 
Query:   12 VIRAATQADFDSISRLYRQLQPSDPALAETTHGAAFDEILRRPGM 56
            +IR A+  DFD+I RLYRQL P DP L +    AAF+EIL+ PG+
Sbjct:    1 MIREASSEDFDAIVRLYRQLHPQDPILEDGADRAAFEEILKTPGL 45
[Close]
BLAST of mRNA_M-pyrifera_M_contig126376.5317.1 vs. uniprot
Match: A0A6B2TY38_9ACTN (GNAT family N-acetyltransferase n=1 Tax=Streptomyces sp. SID13031 TaxID=2706046 RepID=A0A6B2TY38_9ACTN)

HSP 1 Score: 46.6 bits (109), Expect = 9.150e-5
Identity = 21/45 (46.67%), Postives = 29/45 (64.44%), Query Frame = 0 
Query:   12 VIRAATQADFDSISRLYRQLQPSDPALAETTHGAAFDEILRRPGM 56
            + R A   DF+S+ RLY+QL P DP LA+    AAF++IL   G+
Sbjct:    1 MFREARTGDFESVQRLYQQLHPGDPVLADKVLKAAFEQILDSRGL 45
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126376.5317.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI000D699D6B9.570e-855.56GNAT family N-acetyltransferase n=1 Tax=Nocardioid... [more]
A0A6B2TY38_9ACTN9.150e-546.67GNAT family N-acetyltransferase n=1 Tax=Streptomyc... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.40.630.30coord: 11..56
e-value: 1.5E-5
score: 27.0

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126376contigM-pyrifera_M_contig126376:338..505 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126376.5317.1mRNA_M-pyrifera_M_contig126376.5317.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126376 338..505 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126376.5317.1 ID=prot_M-pyrifera_M_contig126376.5317.1|Name=mRNA_M-pyrifera_M_contig126376.5317.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=56bp
RRSGRGGILAEVIRAATQADFDSISRLYRQLQPSDPALAETTHGAAFDEI
LRRPGM
back to top