prot_M-pyrifera_M_contig126212.5287.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126212.5287.1
Unique Nameprot_M-pyrifera_M_contig126212.5287.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length158
Homology
BLAST of mRNA_M-pyrifera_M_contig126212.5287.1 vs. uniprot
Match: A0A354B9X2_9ACTN (DUF58 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A354B9X2_9ACTN)

HSP 1 Score: 182 bits (461), Expect = 1.170e-54
Identity = 98/155 (63.23%), Postives = 114/155 (73.55%), Query Frame = 0
Query:    2 VAIDTRPPGDHADTLDITTSVAASIASSVLAAGDATMVETTDGRSTPMVHGNAQLDQVLEFLALLDGGSPTIHPAVPTEAGTVVVVSADPTLATDHEARMVFAQRLRARVVVTCATDGWGDADAGS-STGDWIHLTGPGQLADLWTLDQRVAAVG 155
            V IDTRPPGD A  LD TTS+A S+A+SVLAAGDA  +ETTDGRSTP+V GN QL+ +LEFLALLD G+  I PA+P+ AGTVV VSADP LA+D  AR  FA RLRA +V+T   D WG A  G  STG WIHLTGPGQLA  W L +  + +G
Sbjct:  108 VVIDTRPPGDAARALDRTTSIAGSVAASVLAAGDAMRIETTDGRSTPLVSGNPQLESLLEFLALLDDGAEQISPAIPSGAGTVVAVSADPILASDVAARRRFAVRLRAAIVITIDADSWGTATTGPISTGGWIHLTGPGQLAGHWRLGRSASTLG 262          
BLAST of mRNA_M-pyrifera_M_contig126212.5287.1 vs. uniprot
Match: A0A7X6APS2_9ACTN (DUF58 domain-containing protein n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6APS2_9ACTN)

HSP 1 Score: 174 bits (442), Expect = 9.770e-53
Identity = 95/157 (60.51%), Postives = 111/157 (70.70%), Query Frame = 0
Query:    2 VAIDTRPPGDHADTLDITTSVAASIASSVLAAGDATMVETTDGRSTPMVHGNAQLDQVLEFLALLDGGSPTIHPAVPTEAGTVVVVSADPTLATDHEARMVFAQRLRARVVVTCATDGWGDADAGSS-----TGDWIHLTGPGQLADLWTLDQRVAA 153
            V IDTRPPGD    LD+TTS+A SIA++VLAAGDA  +ETTDGRSTP++ G + LD +LEFLALLDGGS  I+P VP  +GTVV VSADP +ATD  AR    +RLRARVVVT     W  A + S+     TGDWIHLTG GQLA  W LD  + A
Sbjct:   33 VIIDTRPPGDQTSMLDVTTSIAGSIAAAVLAAGDAIRIETTDGRSTPLMLGRSHLDDMLEFLALLDGGSSRINPEVPVGSGTVVAVSADPRVATDIAARQTLGRRLRARVVVTVDAANWAPAGSTSTAGSHRTGDWIHLTGAGQLASHWRLDSLIKA 189          
BLAST of mRNA_M-pyrifera_M_contig126212.5287.1 vs. uniprot
Match: A0A2E8LCM8_9ACTN (DUF58 domain-containing protein n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8LCM8_9ACTN)

HSP 1 Score: 177 bits (450), Expect = 4.000e-51
Identity = 95/155 (61.29%), Postives = 114/155 (73.55%), Query Frame = 0
Query:    2 VAIDTRPPGDHADTLDITTSVAASIASSVLAAGDATMVETTDGRSTPMVHGNAQLDQVLEFLALLDGGSPTIHPAVPTEAGTVVVVSADPTLATDHEARMVFAQRLRARVVVTCATDGWGDADAGS-STGDWIHLTGPGQLADLWTLDQRVAAVG 155
            V IDTRPPGD A  LD TTS+A S+A+SVLAAGDAT +ETTDGRSTP+V GN QL+ +LEFLALL  G+  I+PA+P  AGTVV +SADP LA+D   R  FA RLRA +V+T   D WG   +G  STG+WIHLTGPGQLA  W L +  + +G
Sbjct:  279 VVIDTRPPGDTARALDRTTSIAGSVAASVLAAGDATRIETTDGRSTPLVSGNPQLESLLEFLALLHDGAEQINPAIPGGAGTVVAISADPILASDAAVRRRFAVRLRAAIVITLDADSWGTMVSGPVSTGEWIHLTGPGQLAAHWRLGRLASTLG 433          
BLAST of mRNA_M-pyrifera_M_contig126212.5287.1 vs. uniprot
Match: A0A6B1AWI4_9ACTN (DUF58 domain-containing protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B1AWI4_9ACTN)

HSP 1 Score: 168 bits (425), Expect = 8.810e-48
Identity = 92/149 (61.74%), Postives = 107/149 (71.81%), Query Frame = 0
Query:    2 VAIDTRPPGDHADTLDITTSVAASIASSVLAAGDATMVETTDGRSTPMVHGNAQLDQVLEFLALLDGGSPTIHPAVPTEAGTVVVVSADPTLATDHEARMVFAQRLRARVVVTCATDGWGDADAGSSTGDWIHLTGPGQLADLWTLDQR 150
            V IDTRPPGD A  LDITTSVA SIA+SVLAAGDAT++ETTDGRST  V G++QLD +LEFLALL  GSP IH A+P+ +GTV+ VSADP L TD  AR  FA+RL A++V+T   D WG    G  +  WIHLT P QL  L   D R
Sbjct:  242 VVIDTRPPGDLAAALDITTSVAGSIAASVLAAGDATLIETTDGRSTRRVIGSSQLDSLLEFLALLANGSPQIHAAIPSNSGTVIAVSADPVLVTDLTARRNFAERLGAQLVITTDVDAWGRDSHGHRSPGWIHLTAPNQLGALLPSDAR 390          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126212.5287.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A354B9X2_9ACTN1.170e-5463.23DUF58 domain-containing protein n=1 Tax=Acidimicro... [more]
A0A7X6APS2_9ACTN9.770e-5360.51DUF58 domain-containing protein n=1 Tax=Actinomyce... [more]
A0A2E8LCM8_9ACTN4.000e-5161.29DUF58 domain-containing protein n=5 Tax=Acidimicro... [more]
A0A6B1AWI4_9ACTN8.810e-4861.74DUF58 domain-containing protein n=1 Tax=Acidimicro... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126212contigM-pyrifera_M_contig126212:2..475 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126212.5287.1mRNA_M-pyrifera_M_contig126212.5287.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126212 2..475 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126212.5287.1 ID=prot_M-pyrifera_M_contig126212.5287.1|Name=mRNA_M-pyrifera_M_contig126212.5287.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=158bp
TVAIDTRPPGDHADTLDITTSVAASIASSVLAAGDATMVETTDGRSTPMV
HGNAQLDQVLEFLALLDGGSPTIHPAVPTEAGTVVVVSADPTLATDHEAR
MVFAQRLRARVVVTCATDGWGDADAGSSTGDWIHLTGPGQLADLWTLDQR
VAAVGGR*
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