prot_M-pyrifera_M_contig126207.5286.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126207.5286.1
Unique Nameprot_M-pyrifera_M_contig126207.5286.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length167
Homology
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BLAST of mRNA_M-pyrifera_M_contig126207.5286.1 vs. uniprot
Match: UPI00147105D0 (transient receptor potential cation channel subfamily A member 1b n=1 Tax=Thalassophryne amazonica TaxID=390379 RepID=UPI00147105D0)

HSP 1 Score: 53.5 bits (127), Expect = 3.400e-5
Identity = 31/95 (32.63%), Postives = 53/95 (55.79%), Query Frame = 0 
Query:   27 LHIAIDQANVAMCQMLMEGCADPSVVDDKGCTALHRAVIAGHETVIELFLEFSTEEDYAPYINVNCFAKDGTTPLVTAVVRKNQDVVALLLAYKA 121
            LH A++Q     C+ L++  ADP+++++   + LH AV  GH +++ELFL +ST +        N     G TPL+ A    N + +++LL + A
Sbjct:   99 LHWAVEQNKADSCRALLDLEADPNILNNMLQSPLHLAVNLGHNSLVELFLSYSTTDS-------NLHGDLGNTPLILACSINNFEALSILLKHGA 186
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BLAST of mRNA_M-pyrifera_M_contig126207.5286.1 vs. uniprot
Match: A0A1V9YD74_9STRA (Ankyrin n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9YD74_9STRA)

HSP 1 Score: 51.2 bits (121), Expect = 6.900e-5
Identity = 42/142 (29.58%), Postives = 64/142 (45.07%), Query Frame = 0 
Query:    5 IVELLLAHGAAVDAKTSTGLSALHIAIDQANVAMCQMLMEGCADPSVVDDKGCTALHRAVIAGHETVIELFLEFSTEEDYAPY-----------------------INVNCFAKDGTTPLVTAVVRKNQDVVALLLAYKADA 123
            ++E LL+  A VDA+   G+S L ++ +  +V   +ML++  A PSVVD++G +ALH A        + + LE   + +   Y                        +V+    DG TPL  AVV  +    A LL   ADA
Sbjct:    1 MIEFLLSQRANVDAQDYDGVSPLMLSAENGDVTGMRMLLDRGARPSVVDNRGYSALHHACAKHQVAAVSVLLETGADLNSPSYDGMFPLHILALLGFTDVATLLTQSHVDVRDADGRTPLHLAVVSGHAAFAAFLLEVGADA 142
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126207.5286.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
UPI00147105D03.400e-532.63transient receptor potential cation channel subfam... [more]
A0A1V9YD74_9STRA6.900e-529.58Ankyrin n=1 Tax=Achlya hypogyna TaxID=1202772 RepI... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002110Ankyrin repeatPRINTSPR01415ANKYRINcoord: 145..159
score: 36.93
coord: 56..71
score: 39.84
IPR002110Ankyrin repeatSMARTSM00248ANK_2acoord: 129..158
e-value: 0.0018
score: 27.6
coord: 96..125
e-value: 1.2
score: 18.2
coord: 55..84
e-value: 0.36
score: 19.9
coord: 22..51
e-value: 0.37
score: 19.9
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 55..87
score: 8.79
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 22..54
score: 9.725
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 129..161
score: 12.048
IPR002110Ankyrin repeatPROSITEPS50088ANK_REPEATcoord: 96..128
score: 9.297
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 1..84
e-value: 2.6E-21
score: 77.8
IPR036770Ankyrin repeat-containing domain superfamilyGENE3D1.25.40.20coord: 85..167
e-value: 5.3E-18
score: 67.0
IPR036770Ankyrin repeat-containing domain superfamilySUPERFAMILY48403Ankyrin repeatcoord: 1..166
IPR020683Ankyrin repeat-containing domainPFAMPF12796Ank_2coord: 91..160
e-value: 9.8E-9
score: 35.7
coord: 2..77
e-value: 2.3E-11
score: 44.1
IPR020683Ankyrin repeat-containing domainPROSITEPS50297ANK_REP_REGIONcoord: 1..167
score: 41.354
NoneNo IPR availablePANTHERPTHR24180FAMILY NOT NAMEDcoord: 56..167
coord: 1..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126207contigM-pyrifera_M_contig126207:7..507 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126207.5286.1mRNA_M-pyrifera_M_contig126207.5286.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126207 7..507 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126207.5286.1 ID=prot_M-pyrifera_M_contig126207.5286.1|Name=mRNA_M-pyrifera_M_contig126207.5286.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=167bp
GHSAIVELLLAHGAAVDAKTSTGLSALHIAIDQANVAMCQMLMEGCADPS
VVDDKGCTALHRAVIAGHETVIELFLEFSTEEDYAPYINVNCFAKDGTTP
LVTAVVRKNQDVVALLLAYKADATLTTVAGDSPLAVAVRKKDLSVVRMLL
EAGASPTAMDDNDMSPV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002110Ankyrin_rpt
IPR036770Ankyrin_rpt-contain_sf
IPR020683Ankyrin_rpt-contain_dom