prot_M-pyrifera_M_contig12616.5275.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12616.5275.1
Unique Nameprot_M-pyrifera_M_contig12616.5275.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length38
Homology
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: Q8QN96_ESV1K (EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN96_ESV1K)

HSP 1 Score: 62.8 bits (151), Expect = 2.790e-12
Identity = 29/38 (76.32%), Postives = 33/38 (86.84%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACKV 38
            MMYG GDD++PLPETVACMQQ LV+EYV H+T EAC V
Sbjct:    9 MMYGAGDDEHPLPETVACMQQ-LVAEYVSHVTSEACLV 45          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: D8LPL2_ECTSI (EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LPL2_ECTSI)

HSP 1 Score: 61.2 bits (147), Expect = 9.370e-12
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACKV 38
            MMYG GDD++PLPETV CMQQ LV+EYV H+T EAC V
Sbjct:    1 MMYGAGDDEHPLPETVGCMQQ-LVAEYVSHVTSEACLV 37          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: Q8QN93_ESV1K (EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (isolate New Zealand/Kaikoura/1988) TaxID=654926 RepID=Q8QN93_ESV1K)

HSP 1 Score: 60.5 bits (145), Expect = 3.900e-11
Identity = 28/38 (73.68%), Postives = 32/38 (84.21%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACKV 38
            MMYG GDD++PLPETV CMQQ LV+EYV H+T EAC V
Sbjct:   32 MMYGAGDDEHPLPETVDCMQQ-LVAEYVSHVTSEACLV 68          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: D7FXB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXB5_ECTSI)

HSP 1 Score: 57.0 bits (136), Expect = 7.560e-9
Identity = 25/37 (67.57%), Postives = 33/37 (89.19%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACK 37
            MMYGFGD+ +PLPETVA MQ+ +V EYV+++TD+ACK
Sbjct:   31 MMYGFGDEQHPLPETVAYMQE-VVGEYVQYVTDKACK 66          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: A0A6A5C0T4_NAEFO (Uncharacterized protein n=1 Tax=Naegleria fowleri TaxID=5763 RepID=A0A6A5C0T4_NAEFO)

HSP 1 Score: 49.7 bits (117), Expect = 7.650e-6
Identity = 25/38 (65.79%), Postives = 28/38 (73.68%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACKV 38
            MMYGFGD  NPLPETVA M++ LV EYV  I  EA K+
Sbjct:  197 MMYGFGDVKNPLPETVALMEE-LVKEYVHEIVTEATKM 233          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: A0A1D1XUP5_9ARAE (Transcription initiation factor TFIID subunit 13 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XUP5_9ARAE)

HSP 1 Score: 46.2 bits (108), Expect = 4.730e-5
Identity = 22/35 (62.86%), Postives = 27/35 (77.14%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEA 35
            MMYGFGDD NPLPETVA ++  +V EYV  +T +A
Sbjct:   38 MMYGFGDDPNPLPETVALVED-IVVEYVTDLTHKA 71          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: A0A1D1XKD5_9ARAE (Transcription initiation factor TFIID subunit 13 n=1 Tax=Anthurium amnicola TaxID=1678845 RepID=A0A1D1XKD5_9ARAE)

HSP 1 Score: 45.4 bits (106), Expect = 6.800e-5
Identity = 21/36 (58.33%), Postives = 26/36 (72.22%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEAC 36
            MMYGFGDD NPLPETVA ++  +V EYV  +  + C
Sbjct:   38 MMYGFGDDPNPLPETVALVED-IVVEYVTDLICQCC 72          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: A0A7J6V3A9_THATH (Transcription initiation factor TFIID subunit 13-like n=2 Tax=Ranunculaceae TaxID=3440 RepID=A0A7J6V3A9_THATH)

HSP 1 Score: 45.8 bits (107), Expect = 8.990e-5
Identity = 22/40 (55.00%), Postives = 27/40 (67.50%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQ---QLVSEYVRHITDEACK 37
            MMYGFGDD NPLPETVA ++    + V++ V    D ACK
Sbjct:   60 MMYGFGDDPNPLPETVALLEDIAVEYVTDLVNKAQDIACK 99          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: A0A078FRE9_BRANA ((rape) hypothetical protein n=6 Tax=Brassiceae TaxID=981071 RepID=A0A078FRE9_BRANA)

HSP 1 Score: 45.4 bits (106), Expect = 9.230e-5
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACKV 38
            MMYGFGD+ NPLPETVA ++  +V EYV  +T +A ++
Sbjct:   38 MMYGFGDEQNPLPETVALVED-IVVEYVTDLTHKAQEI 74          
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Match: A0A078FQ38_BRANA (BnaC05g01350D protein n=2 Tax=Brassica napus TaxID=3708 RepID=A0A078FQ38_BRANA)

HSP 1 Score: 45.4 bits (106), Expect = 9.370e-5
Identity = 21/38 (55.26%), Postives = 29/38 (76.32%), Query Frame = 0
Query:    1 MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACKV 38
            MMYGFGD+ NPLPETVA ++  +V EYV  +T +A ++
Sbjct:   39 MMYGFGDEQNPLPETVALVED-IVVEYVTDLTHKAQEI 75          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12616.5275.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 11
Match NameE-valueIdentityDescription
Q8QN96_ESV1K2.790e-1276.32EsV-1-193 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D8LPL2_ECTSI9.370e-1273.68EsV-1-193/196 n=1 Tax=Ectocarpus siliculosus TaxID... [more]
Q8QN93_ESV1K3.900e-1173.68EsV-1-196 n=1 Tax=Ectocarpus siliculosus virus 1 (... [more]
D7FXB5_ECTSI7.560e-967.57Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6A5C0T4_NAEFO7.650e-665.79Uncharacterized protein n=1 Tax=Naegleria fowleri ... [more]
A0A1D1XUP5_9ARAE4.730e-562.86Transcription initiation factor TFIID subunit 13 n... [more]
A0A1D1XKD5_9ARAE6.800e-558.33Transcription initiation factor TFIID subunit 13 n... [more]
A0A7J6V3A9_THATH8.990e-555.00Transcription initiation factor TFIID subunit 13-l... [more]
A0A078FRE9_BRANA9.230e-555.26(rape) hypothetical protein n=6 Tax=Brassiceae Tax... [more]
A0A078FQ38_BRANA9.370e-555.26BnaC05g01350D protein n=2 Tax=Brassica napus TaxID... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR003195Transcription initiation factor IID, subunit 13PFAMPF02269TFIID-18kDacoord: 1..38
e-value: 1.0E-7
score: 31.9
IPR009072Histone-foldGENE3D1.10.20.10coord: 1..38
e-value: 2.3E-13
score: 51.5
IPR009072Histone-foldSUPERFAMILY47113Histone-foldcoord: 1..37

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12616contigM-pyrifera_M_contig12616:4426..5497 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12616.5275.1mRNA_M-pyrifera_M_contig12616.5275.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12616 4426..5500 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12616.5275.1 ID=prot_M-pyrifera_M_contig12616.5275.1|Name=mRNA_M-pyrifera_M_contig12616.5275.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=38bp
MMYGFGDDDNPLPETVACMQQQLVSEYVRHITDEACKV
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR003195TFIID_TAF13
IPR009072Histone-fold