prot_M-pyrifera_M_contig126024.5254.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig126024.5254.1
Unique Nameprot_M-pyrifera_M_contig126024.5254.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length103
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A6C9Z5_9PLAN (Translation initiation factor IF-3 n=14 Tax=Planctomycetaceae TaxID=126 RepID=A6C9Z5_9PLAN)

HSP 1 Score: 181 bits (460), Expect = 3.030e-57
Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YERKKKTSKNTKQHQV LKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILG+IQE+LS++AKVEQA +MASGRNMIMVLAPR
Sbjct:   29 YERKKKTSKNTKQHQVQLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGDIQEQLSEIAKVEQAATMASGRNMIMVLAPR 130
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A517XJS4_9PLAN (Translation initiation factor IF-3 n=6 Tax=Gimesia TaxID=1649453 RepID=A0A517XJS4_9PLAN)

HSP 1 Score: 181 bits (460), Expect = 4.300e-57
Identity = 95/102 (93.14%), Postives = 100/102 (98.04%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YERKKKTSKNTKQHQV LKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILG+IQE+LS++AKVEQA +MASGRNMIMVLAPR
Sbjct:   40 YERKKKTSKNTKQHQVQLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGDIQEQLSEIAKVEQAATMASGRNMIMVLAPR 141
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A2E0SJR1_9PLAN (Translation initiation factor IF-3 n=1 Tax=Planctomyces sp. TaxID=37635 RepID=A0A2E0SJR1_9PLAN)

HSP 1 Score: 132 bits (333), Expect = 1.670e-37
Identity = 71/102 (69.61%), Postives = 79/102 (77.45%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+KKK +KNTKQHQ  LKEIR+RPK G HDIEFK+K AR+FL  KDKVK NIMF+GRENAHHE GR IL  I E L D+AKVE  P M  GRNM  V+APR
Sbjct:   61 YEQKKKLAKNTKQHQTQLKEIRLRPKTGDHDIEFKVKRAREFLANKDKVKINIMFKGRENAHHERGREILLGIIESLDDIAKVEAPPRMEGGRNMSTVVAPR 162
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A7C4LMH3_9PLAN (Translation initiation factor IF-3 n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=A0A7C4LMH3_9PLAN)

HSP 1 Score: 132 bits (331), Expect = 4.120e-37
Identity = 67/102 (65.69%), Postives = 83/102 (81.37%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+KKK S +TKQHQV LKEIR+RPK G+HDIEFK+K AR+FL  KDKVK N++FRGRENAHH+ GR IL  I ++L D+AK+E+ PS+  GRNM  VLAP+
Sbjct:   67 YEQKKKHSSSTKQHQVQLKEIRLRPKTGEHDIEFKVKQAREFLTHKDKVKLNVIFRGRENAHHDRGREILVSIIDELQDVAKIEKPPSLEGGRNMTAVLAPK 168
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A518CKL7_9PLAN (Translation initiation factor IF-3 n=1 Tax=Polystyrenella longa TaxID=2528007 RepID=A0A518CKL7_9PLAN)

HSP 1 Score: 130 bits (328), Expect = 9.570e-37
Identity = 69/102 (67.65%), Postives = 79/102 (77.45%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+KKK +KNTKQHQ  LKEIR+RPK G HDI+FK+K AR FL+QKDKVK NIMF+GRENAHHE GR IL  I   L D+AKVE  P M  GRNM  V++PR
Sbjct:   61 YEQKKKLAKNTKQHQTQLKEIRLRPKTGDHDIDFKVKQARTFLKQKDKVKINIMFKGRENAHHERGREILLSIIASLDDVAKVEAPPRMEGGRNMSAVVSPR 162
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A2E3GW47_9PLAN (Translation initiation factor IF-3 n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A2E3GW47_9PLAN)

HSP 1 Score: 129 bits (324), Expect = 4.610e-36
Identity = 66/102 (64.71%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+KK+ SKNTK HQ  LKEIR+RPKIG HDIEFK+K AR FL  +DKVK  +MFRGRENAHHE GR +L  I   L D+AK+E+ P M SGR+M  +LAPR
Sbjct:   67 YEQKKRQSKNTKVHQTQLKEIRLRPKIGDHDIEFKMKKARDFLVHRDKVKLTVMFRGRENAHHERGRDVLNSIVADLEDIAKLEKPPGMESGRSMTAILAPR 168
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: UPI001ED909F8 (translation initiation factor IF-3 n=1 Tax=Schlesneria paludicola TaxID=360056 RepID=UPI001ED909F8)

HSP 1 Score: 128 bits (322), Expect = 6.170e-36
Identity = 63/102 (61.76%), Postives = 81/102 (79.41%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+K+K + + KQHQV LKEIR+RPK G+HDI+FK+K AR FL  KDKVKFN+ F+GRENAHH+ GR +L  I E+L D++KVE+ PSM  GRNM  VL+P+
Sbjct:   52 YEQKRKAANSAKQHQVQLKEIRLRPKTGEHDIDFKVKQARDFLAHKDKVKFNVQFKGRENAHHDRGREMLASIIEQLQDISKVEKTPSMEGGRNMTAVLSPK 153
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A1C3EQI0_9PLAN (Translation initiation factor IF-3 n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A1C3EQI0_9PLAN)

HSP 1 Score: 127 bits (320), Expect = 2.210e-35
Identity = 64/102 (62.75%), Postives = 82/102 (80.39%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+KKK + + KQHQV +KEIR+RPK G+HDIEFK+K A++FL QKDKVK NI+FRGRENAHH+ G+ IL  I ++L++  KVEQ P +  GRNMI VLAP+
Sbjct:   72 YEQKKKHANSAKQHQVQIKEIRLRPKTGEHDIEFKVKQAKEFLSQKDKVKLNIIFRGRENAHHDRGKEILANIIQQLAEHCKVEQMPKLEGGRNMIAVLAPK 173
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A3E0Q5S8_9BACT (Translation initiation factor IF-3 n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A3E0Q5S8_9BACT)

HSP 1 Score: 127 bits (320), Expect = 2.210e-35
Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+KKKTSK  K HQ+ +KEIR+RPK G HDIEFK+K AR+FLEQ+DKVK N+MFRGRENAHH+ GR +L +I E L D++KVE+ P M   R+M  +LAP+
Sbjct:   73 YEQKKKTSKGQKTHQIQVKEIRLRPKTGDHDIEFKIKRARRFLEQRDKVKLNVMFRGRENAHHDRGREMLNQIIEVLDDVSKVEKFPGMEGPRSMSAILAPK 174
[Close]
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Match: A0A356AGB6_9PLAN (Translation initiation factor IF-3 n=4 Tax=Planctomycetaceae TaxID=126 RepID=A0A356AGB6_9PLAN)

HSP 1 Score: 127 bits (320), Expect = 2.280e-35
Identity = 65/102 (63.73%), Postives = 78/102 (76.47%), Query Frame = 0 
Query:    1 YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVKFNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLAPR 102
            YE+KKK SKNTKQHQ  LKEIR+RPKIG+HDI+FK+K AR FL   DKVK  +MF+GRENAHHE GR IL  I + L D+AK+E+ P M  GR+M  +L PR
Sbjct:   74 YEQKKKLSKNTKQHQTQLKEIRLRPKIGEHDIDFKMKKARDFLLHHDKVKLTVMFKGRENAHHERGRDILESIAKSLDDIAKLEKMPGMDGGRSMTAILTPR 175
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig126024.5254.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A6C9Z5_9PLAN3.030e-5793.14Translation initiation factor IF-3 n=14 Tax=Planct... [more]
A0A517XJS4_9PLAN4.300e-5793.14Translation initiation factor IF-3 n=6 Tax=Gimesia... [more]
A0A2E0SJR1_9PLAN1.670e-3769.61Translation initiation factor IF-3 n=1 Tax=Plancto... [more]
A0A7C4LMH3_9PLAN4.120e-3765.69Translation initiation factor IF-3 n=1 Tax=Schlesn... [more]
A0A518CKL7_9PLAN9.570e-3767.65Translation initiation factor IF-3 n=1 Tax=Polysty... [more]
A0A2E3GW47_9PLAN4.610e-3664.71Translation initiation factor IF-3 n=4 Tax=Plancto... [more]
UPI001ED909F86.170e-3661.76translation initiation factor IF-3 n=1 Tax=Schlesn... [more]
A0A1C3EQI0_9PLAN2.210e-3562.75Translation initiation factor IF-3 n=4 Tax=Plancto... [more]
A0A3E0Q5S8_9BACT2.210e-3562.75Translation initiation factor IF-3 n=1 Tax=Plancto... [more]
A0A356AGB6_9PLAN2.280e-3563.73Translation initiation factor IF-3 n=4 Tax=Plancto... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019815Translation initiation factor 3, C-terminalPFAMPF00707IF3_Ccoord: 16..101
e-value: 1.1E-34
score: 118.2
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilyGENE3D3.30.110.10coord: 5..102
e-value: 5.4E-36
score: 124.3
IPR036788Translation initiation factor 3 (IF-3), C-terminal domain superfamilySUPERFAMILY55200Translation initiation factor IF3, C-terminal domaincoord: 16..101
IPR001288Translation initiation factor 3TIGRFAMTIGR00168TIGR00168coord: 2..102
e-value: 2.6E-32
score: 109.7
IPR001288Translation initiation factor 3PANTHERPTHR10938TRANSLATION INITIATION FACTOR IF-3coord: 2..101
NoneNo IPR availablePANTHERPTHR10938:SF0TRANSLATION INITIATION FACTOR IF-3, MITOCHONDRIALcoord: 2..101

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig126024contigM-pyrifera_M_contig126024:202..510 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig126024.5254.1mRNA_M-pyrifera_M_contig126024.5254.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig126024 202..510 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig126024.5254.1 ID=prot_M-pyrifera_M_contig126024.5254.1|Name=mRNA_M-pyrifera_M_contig126024.5254.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=103bp
YERKKKTSKNTKQHQVHLKEIRMRPKIGKHDIEFKLKSARKFLEQKDKVK
FNIMFRGRENAHHELGRTILGEIQEKLSDLAKVEQAPSMASGRNMIMVLA
PR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019815Translation_initiation_fac_3_C
IPR036788T_IF-3_C_sf
IPR001288Translation_initiation_fac_3