prot_M-pyrifera_M_contig12581.5225.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig12581.5225.1
Unique Name	prot_M-pyrifera_M_contig12581.5225.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	181

Homology

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: D7FL45_ECTSI (Plastoquinol--plastocyanin reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FL45_ECTSI)

HSP 1 Score: 324 bits (831), Expect = 4.900e-111
Identity = 152/179 (84.92%), Postives = 163/179 (91.06%), Query Frame = 0

Query:    1 MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 179
            MKMS+ ++ FVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVP        GV AKDAIG+EVT +SWLATHGVGSRELAEGIKGDATYLVVTEDKK+QDYGIVAVCTHLGCVVPWNKAENKF+CPCHGSQYD TGKV+RGPAPLSLALSHVEE DGKV+FK+W ETDFR G+KPWW
Sbjct:   46 MKMSSNEEVFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPXXXXXXXXGVTAKDAIGNEVTVESWLATHGVGSRELAEGIKGDATYLVVTEDKKVQDYGIVAVCTHLGCVVPWNKAENKFMCPCHGSQYDQTGKVIRGPAPLSLALSHVEEVDGKVIFKEWKETDFRTGDKPWW 224

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A835YPA4_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YPA4_9STRA)

HSP 1 Score: 295 bits (756), Expect = 1.210e-99
Identity = 138/177 (77.97%), Postives = 153/177 (86.44%), Query Frame = 0

Query:    3 MSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 179
            MSAA+DAFVPDM+RR AMNLILAGS GV VLGLAVPYIAFFVP  +G +GGGVIA+DA+G +VT + WL TH  GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW +AENKFICPCHGSQY+A GKVVRGPAPLSLALSH++   GKVVFK W+ETDFR GE PWW
Sbjct:   45 MSAAEDAFVPDMNRRVAMNLILAGSAGVVVLGLAVPYIAFFVPKSAGNAGGGVIARDAVGQDVTVEGWLGTHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNADGKVVRGPAPLSLALSHIDTESGKVVFKPWTETDFRTGEAPWW 221

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A836CBH8_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CBH8_9STRA)

HSP 1 Score: 294 bits (753), Expect = 3.460e-99
Identity = 136/179 (75.98%), Postives = 155/179 (86.59%), Query Frame = 0

Query:    1 MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 179
            +KMSAA+DAFVPDM+RR AMN ILAGS GV VLGLA+PYI+FFVP  +GG+GGGVIA+DA+G +VT + W+ATH  GSREL EGIKGDATYL V +DK IQD+GIVAVCTHLGCVVPW +AENKFICPCHGSQY+  GKVVRGPAPLSLALSH+E + G VVFK W+ETDFR GE PWW
Sbjct:   43 IKMSAAEDAFVPDMNRRVAMNAILAGSAGVVVLGLAIPYISFFVPKSAGGAGGGVIARDAVGQDVTVEGWVATHLPGSRELVEGIKGDATYLTVKQDKTIQDFGIVAVCTHLGCVVPWVQAENKFICPCHGSQYNMDGKVVRGPAPLSLALSHIETDTGNVVFKPWTETDFRTGEAPWW 221

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A7S1U2M5_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1U2M5_9STRA)

HSP 1 Score: 280 bits (717), Expect = 1.360e-92
Identity = 124/179 (69.27%), Postives = 147/179 (82.12%), Query Frame = 0

Query:    1 MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 179
            M M+A++DAFVPDMDRR  MN IL  S+GV  LG+AVPYI+FFVP GSGG G G IAKDA+G++VT   WL TH  G+REL +G+KGDATYL+V +DK +++YG+ AVCTHLGCVVPWN A+ KF+CPCHGSQY+  GKVVRGPAPLSLAL+HVE  DGKVVF  W+ETDFR GE PWW
Sbjct:  120 MTMAASEDAFVPDMDRRNVMNAILTASVGVAGLGMAVPYISFFVPAGSGGGGSGTIAKDALGNDVTESGWLGTHNAGARELVQGLKGDATYLIVNDDKTLENYGLSAVCTHLGCVVPWNAAQGKFMCPCHGSQYNKEGKVVRGPAPLSLALAHVENKDGKVVFTPWTETDFRTGEAPWW 298

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: W7TXJ0_9STRA (Plastoquinol--plastocyanin reductase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TXJ0_9STRA)

HSP 1 Score: 274 bits (701), Expect = 4.720e-91
Identity = 123/179 (68.72%), Postives = 145/179 (81.01%), Query Frame = 0

Query:    1 MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 179
            M  +  ++ FVPDMDRR  MN IL GS+G+NV GLAVPYIAFFVP   GG+GGG+ AKDA+G +VT   WL+TH  G R L +G+KGDATYL+V EDK I++YG+ AVCTHLGCVVPWNKAE+KFICPCHGSQYD TGKVVRGPAPLSLAL+HV+E+DGKV+   W+ETDFR    PWW
Sbjct:   58 MAEAVGEEPFVPDMDRRKLMNTILLGSVGLNVAGLAVPYIAFFVPRTGGGAGGGLAAKDALGDDVTVQGWLSTHQAGDRSLVQGLKGDATYLIVKEDKTIENYGLNAVCTHLGCVVPWNKAESKFICPCHGSQYDKTGKVVRGPAPLSLALAHVKESDGKVLLTPWTETDFRTDTAPWW 236

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A835ZDT9_9STRA (Cytochrome b6-f complex iron-sulfur subunit, chloroplastic-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZDT9_9STRA)

HSP 1 Score: 265 bits (678), Expect = 5.420e-88
Identity = 125/182 (68.68%), Postives = 145/182 (79.67%), Query Frame = 0

Query:    3 MSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPP-GSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTED----KKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 179
            MSAAD+A+VPDM RR A+NLIL    GV VLGLA+PY+A FVP    GG  G V+A+DA+G EVT++ WLATH  GSREL EG+KGDATYL+V +D    K I+D GIVAVCTH+GCVVPWN AENKFICPCH SQYDA G+VVRGPAPLSLALSHV+   GKV+ + W+ETDFR GE PWW
Sbjct:   26 MSAADEAYVPDMGRRQALNLILVSFTGVTVLGLAIPYVALFVPKHAEGGRSGSVVARDALGQEVTSEGWLATHLPGSRELVEGMKGDATYLIVDKDELHGKAIRDLGIVAVCTHMGCVVPWNAAENKFICPCHASQYDANGRVVRGPAPLSLALSHVDTGSGKVLLRPWTETDFRTGEAPWW 207

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A7S2V1Z6_9STRA (Plastoquinol--plastocyanin reductase n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V1Z6_9STRA)

HSP 1 Score: 261 bits (668), Expect = 1.560e-85
Identity = 114/173 (65.90%), Postives = 135/173 (78.03%), Query Frame = 0

Query:    7 DDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWW 179
            DD F+PDM RR  MNL+LAG++G+NV    +PY+ FFVPP  GG      A DA+GSE+  D WL TH  G R L +G+KGDATYL+VTE+  I+ YG+ AVCTHLGCVVPWNKA NKFICPCHGSQYD+TGKVVRGPAPLSLAL+HVE +DGK+VF+ W+E DFR G  PWW
Sbjct:   99 DDKFIPDMGRRKLMNLLLAGTVGLNVAAFGLPYVYFFVPPKQGGGSSSTNALDALGSEIKADQWLETHQTGDRSLVQGLKGDATYLIVTEENAIESYGLNAVCTHLGCVVPWNKAANKFICPCHGSQYDSTGKVVRGPAPLSLALAHVENDDGKIVFETWTEKDFRTGLDPWW 271

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: Q20BN1_PANGI (Plastoquinol--plastocyanin reductase n=1 Tax=Panax ginseng TaxID=4054 RepID=Q20BN1_PANGI)

HSP 1 Score: 253 bits (647), Expect = 1.300e-83
Identity = 114/170 (67.06%), Postives = 133/170 (78.24%), Query Frame = 0

Query:   11 VPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWWS 180
            VPDM++R  MNL+L G++ +   G+ VPY  FFVPPGSG  GGG  AKDA+G++V    WL THG G R L EG+KGD TYLVV  DK++  YGI AVCTHLGCVVPWNKAENKF+CPCHGSQY+  GKVVRGPAPLSLAL+H + +DGKVVF  W+ETDFR GE PWWS
Sbjct:   15 VPDMEKRKLMNLLLLGALSLPSAGMLVPYANFFVPPGSGAGGGGTTAKDALGNDVIATEWLKTHGPGDRTLTEGLKGDPTYLVVEADKQLATYGINAVCTHLGCVVPWNKAENKFMCPCHGSQYNNQGKVVRGPAPLSLALAHADIDDGKVVFVPWTETDFRTGEDPWWS 184

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A804KNF8_MUSAM (Plastoquinol--plastocyanin reductase n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804KNF8_MUSAM)

HSP 1 Score: 254 bits (648), Expect = 4.010e-83
Identity = 112/170 (65.88%), Postives = 134/170 (78.82%), Query Frame = 0

Query:   11 VPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWWS 180
            VPDM +R  +NL+L G++ +   G+ +PY  FFVPPGSGG+GGG +AKDA+G++VT D WL THG G R L +G+KGD TYLVV  DK +  YGI AVCTHLGCVVPWN AE KFICPCHGSQY+  G+VVRGPAPLSLAL+HV+ +DGKVVF  W ETDFR GE PWW+
Sbjct:   59 VPDMGKRQLLNLLLLGTLSLPTAGMLIPYTYFFVPPGSGGAGGGTVAKDALGNDVTLDGWLKTHGPGDRTLTQGLKGDPTYLVVENDKTLATYGINAVCTHLGCVVPWNAAEKKFICPCHGSQYNNQGRVVRGPAPLSLALAHVDVDDGKVVFVPWVETDFRTGEDPWWA 228

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BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Match: A0A2G9GB00_9LAMI (Plastoquinol--plastocyanin reductase n=1 Tax=Handroanthus impetiginosus TaxID=429701 RepID=A0A2G9GB00_9LAMI)

HSP 1 Score: 253 bits (646), Expect = 6.840e-83
Identity = 113/175 (64.57%), Postives = 138/175 (78.86%), Query Frame = 0

Query:    6 ADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGGSGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKIQDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLALSHVEENDGKVVFKQWSETDFRNGEKPWWS 180
            ADD  VPDM++R  MNL+L G++ +  +G+  PY  FFVPPG+GG+GGG +AKDA+G++V  D WL  HG G R LA+G+KGD TYLVV +D+ +  YGI AVCTHLGCVVPWN AENKFICPCHGSQY+  G+VVRGPAPLSLAL+H + +DGKVVF  W ETDFR GE PWW+
Sbjct:   50 ADDR-VPDMEKRQLMNLLLLGALSLPTVGMLYPYTYFFVPPGAGGAGGGTVAKDALGNDVLADEWLKNHGPGDRTLAQGLKGDPTYLVVEKDRTLATYGINAVCTHLGCVVPWNSAENKFICPCHGSQYNNQGRVVRGPAPLSLALAHADIDDGKVVFVPWVETDFRTGEDPWWA 223

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig12581.5225.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
D7FL45_ECTSI	4.900e-111	84.92	Plastoquinol--plastocyanin reductase n=2 Tax=Ectoc...	[more]
A0A835YPA4_9STRA	1.210e-99	77.97	Plastoquinol--plastocyanin reductase n=1 Tax=Tribo...	[more]
A0A836CBH8_9STRA	3.460e-99	75.98	Plastoquinol--plastocyanin reductase n=1 Tax=Tribo...	[more]
A0A7S1U2M5_9STRA	1.360e-92	69.27	Plastoquinol--plastocyanin reductase n=2 Tax=Phaeo...	[more]
W7TXJ0_9STRA	4.720e-91	68.72	Plastoquinol--plastocyanin reductase n=2 Tax=Monod...	[more]
A0A835ZDT9_9STRA	5.420e-88	68.68	Cytochrome b6-f complex iron-sulfur subunit, chlor...	[more]
A0A7S2V1Z6_9STRA	1.560e-85	65.90	Plastoquinol--plastocyanin reductase n=1 Tax=Fibro...	[more]
Q20BN1_PANGI	1.300e-83	67.06	Plastoquinol--plastocyanin reductase n=1 Tax=Panax...	[more]
A0A804KNF8_MUSAM	4.010e-83	65.88	Plastoquinol--plastocyanin reductase n=1 Tax=Musa ...	[more]
A0A2G9GB00_9LAMI	6.840e-83	64.57	Plastoquinol--plastocyanin reductase n=1 Tax=Handr...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005805	Rieske iron-sulphur protein, C-terminal	PRINTS	PR00162	RIESKE	coord: 104..115 score: 66.04 coord: 137..149 score: 61.15 coord: 125..137 score: 65.77
IPR014909	Cytochrome b6-f complex Fe-S subunit	PFAM	PF08802	CytB6-F_Fe-S	coord: 11..47 e-value: 6.3E-13 score: 48.5
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PFAM	PF00355	Rieske	coord: 89..148 e-value: 2.9E-13 score: 49.6
IPR017941	Rieske [2Fe-2S] iron-sulphur domain	PROSITE	PS51296	RIESKE	coord: 73..163 score: 24.023
None	No IPR available	GENE3D	1.20.5.700		coord: 3..45 e-value: 1.4E-10 score: 42.7
None	No IPR available	PANTHER	PTHR10134:SF5	CYTOCHROME B6-F COMPLEX IRON-SULFUR SUBUNIT, CHLOROPLASTIC	coord: 5..180
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..20
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 43..180
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 21..42
None	No IPR available	TMHMM	TMhelix		coord: 21..43
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	GENE3D	2.102.10.10		coord: 46..180 e-value: 4.1E-46 score: 157.9
IPR036922	Rieske [2Fe-2S] iron-sulphur domain superfamily	SUPERFAMILY	50022	ISP domain	coord: 10..179
IPR014349	Rieske iron-sulphur protein	PANTHER	PTHR10134	CYTOCHROME B-C1 COMPLEX SUBUNIT RIESKE, MITOCHONDRIAL	coord: 5..180
IPR023960	Cytochrome b6-f complex iron-sulfur subunit	HAMAP	MF_01335	Cytb6_f_Rieske	coord: 3..180 score: 37.636

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig12581	contig	M-pyrifera_M_contig12581:2673..8826 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig12581.5225.1	mRNA_M-pyrifera_M_contig12581.5225.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig12581 2587..8865 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig12581.5225.1 ID=prot_M-pyrifera_M_contig12581.5225.1|Name=mRNA_M-pyrifera_M_contig12581.5225.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=181bp
MKMSAADDAFVPDMDRRTAMNLILAGSIGVNVLGLAVPYIAFFVPPGSGG
SGGGVIAKDAIGSEVTTDSWLATHGVGSRELAEGIKGDATYLVVTEDKKI
QDYGIVAVCTHLGCVVPWNKAENKFICPCHGSQYDATGKVVRGPAPLSLA
LSHVEENDGKVVFKQWSETDFRNGEKPWWS*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR005805	Rieske_Fe-S_prot_C
IPR014909	Cyt_b6-f_cplx_Fe-S_su
IPR017941	Rieske_2Fe-2S
IPR036922	Rieske_2Fe-2S_sf
IPR014349	Rieske_Fe-S_prot
IPR023960	Cyt_b6_f_Rieske