prot_M-pyrifera_M_contig125787.5217.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig125787.5217.1
Unique Name	prot_M-pyrifera_M_contig125787.5217.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	170

Homology

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A7X6ATU3_9ACTN (Leucine--tRNA ligase n=1 Tax=Actinomycetia bacterium TaxID=1883427 RepID=A0A7X6ATU3_9ACTN)

HSP 1 Score: 311 bits (798), Expect = 2.740e-102
Identity = 146/168 (86.90%), Postives = 157/168 (93.45%), Query Frame = 0

Query:    2 GVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDELRK 169
            GVGGVDLYVGGVEHAVLHLLY+RFWHKVLYDLGHVSGPEPFKRL+NQGYIQAAA+QD+RGIYVPA++VEGD   GF+HDG PVTR FGKMGKSLKNSVTPDDMY+AYGADTLRLYEMSMGPIDQDRPW TR VVGSHRLLQRVWRN+VDEETGE+ V DEP DDEL +
Sbjct:  189 GVGGVDLYVGGVEHAVLHLLYARFWHKVLYDLGHVSGPEPFKRLVNQGYIQAAAYQDERGIYVPAEDVEGDERRGFSHDGRPVTRAFGKMGKSLKNSVTPDDMYAAYGADTLRLYEMSMGPIDQDRPWRTRDVVGSHRLLQRVWRNVVDEETGEVAVVDEPLDDELAR 356

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A7K1Z6G4_9ACTN (Leucine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K1Z6G4_9ACTN)

HSP 1 Score: 301 bits (772), Expect = 3.260e-94
Identity = 145/169 (85.80%), Postives = 156/169 (92.31%), Query Frame = 0

Query:    2 GVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDELRKA 170
            GVGGVDLYVGGVEHAVLHLLY+RFWHKVLYDLGHVSGPEPFKRLINQGYIQAAA+QD+RG YVPA+EV G    GFTH+G  VTR FGKMGKSLKN+VTPDDMY AYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLV+EETGEL VT++  D+ELR+A
Sbjct:  617 GVGGVDLYVGGVEHAVLHLLYARFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAYQDNRGAYVPAEEVVGTPQAGFTHNGGEVTRAFGKMGKSLKNAVTPDDMYEAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVNEETGELLVTEDEPDEELRRA 785

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A2D7RZT1_9ACTN (Leucine--tRNA ligase (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D7RZT1_9ACTN)

HSP 1 Score: 282 bits (722), Expect = 7.920e-92
Identity = 136/170 (80.00%), Postives = 150/170 (88.24%), Query Frame = 0

Query:    1 DGVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDELRKA 170
            +G GGVDLYVGGVEHAVLHLLYSRFWHKVL+DLGHVS  EPF+RLINQGYIQAAAFQD+R IYV A  VEGDA  GFT DG PVTR+FGKMGKSLKNSVTPDDMY+A+GADTLRLYEMSM PI QDRPWETRSVVGS RLLQRVWR ++DE+TGEL V+D+   +EL +A
Sbjct:  109 EGAGGVDLYVGGVEHAVLHLLYSRFWHKVLFDLGHVSTAEPFRRLINQGYIQAAAFQDEREIYVDAASVEGDAQSGFTFDGTPVTRSFGKMGKSLKNSVTPDDMYAAFGADTLRLYEMSMAPITQDRPWETRSVVGSQRLLQRVWRTIIDEQTGELAVSDDAPSEELFRA 278

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A6N9ERV4_9ACTN (Leucine--tRNA ligase n=6 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6N9ERV4_9ACTN)

HSP 1 Score: 295 bits (754), Expect = 1.680e-91
Identity = 140/166 (84.34%), Postives = 151/166 (90.96%), Query Frame = 0

Query:    2 GVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDEL 167
            GVGGVDLYVGGVEHAVLHLLY+RFWHKVLYDLGHVSGPEPFKRLINQGYIQA AF+D RGIYVPA+EV G    GFTHDG+PVTR  GKMGKSLKNSVTPDDMY++YGADTLR+YEM MGPIDQDRPWETRSVVGS R+LQRVWRN+VDEETGEL V+D+  D EL
Sbjct:  628 GVGGVDLYVGGVEHAVLHLLYARFWHKVLYDLGHVSGPEPFKRLINQGYIQAYAFKDGRGIYVPAEEVGGSLQGGFTHDGQPVTRELGKMGKSLKNSVTPDDMYASYGADTLRMYEMFMGPIDQDRPWETRSVVGSQRVLQRVWRNVVDEETGELRVSDDEPDSEL 793

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A7K2E7V0_9ACTN (Leucine--tRNA ligase n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A7K2E7V0_9ACTN)

HSP 1 Score: 291 bits (746), Expect = 2.330e-90
Identity = 138/166 (83.13%), Postives = 150/166 (90.36%), Query Frame = 0

Query:    2 GVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDEL 167
            GVGGVDLYVGGVEHAVLHLLY+RFWHKVLYDLGHVSGPEPF+RLINQGYIQA A++D RG+YVPA+EVEG   +GFTH G+PV R  GKMGKSLKNSVTPDDMY+AYGADTLRLYEM MGPI QDRPWETRSVVGS R+LQRVWRN+VDEETG L VTDE  DD+L
Sbjct:  625 GVGGVDLYVGGVEHAVLHLLYARFWHKVLYDLGHVSGPEPFRRLINQGYIQAYAYKDARGVYVPAEEVEGSLREGFTHGGQPVARELGKMGKSLKNSVTPDDMYAAYGADTLRLYEMFMGPIHQDRPWETRSVVGSQRVLQRVWRNVVDEETGALRVTDEAPDDDL 790

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A6B0WNU6_9ACTN (Leucine--tRNA ligase n=4 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A6B0WNU6_9ACTN)

HSP 1 Score: 291 bits (746), Expect = 2.670e-90
Identity = 139/166 (83.73%), Postives = 151/166 (90.96%), Query Frame = 0

Query:    2 GVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDEL 167
            GVGGVDLYVGGVEHAVLHLLY+RFWHKVLYDLGHVSGPEPFKRLINQGYIQA AF+D RG+YVPA+EVEG    GF+H GE V+R  GKMGKSLKNSVTPDDMY++YGADTLRLYEM MGPIDQDRPWETRSVVGS R+LQRVWRN+VDEETGEL V+DE  DD+L
Sbjct:  634 GVGGVDLYVGGVEHAVLHLLYARFWHKVLYDLGHVSGPEPFKRLINQGYIQAYAFKDSRGVYVPAEEVEGSLEKGFSHSGELVSRELGKMGKSLKNSVTPDDMYASYGADTLRLYEMFMGPIDQDRPWETRSVVGSQRVLQRVWRNVVDEETGELRVSDELPDDDL 799

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A2D6U688_9ACTN (Leucine--tRNA ligase n=5 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2D6U688_9ACTN)

HSP 1 Score: 285 bits (728), Expect = 1.110e-87
Identity = 138/167 (82.63%), Postives = 149/167 (89.22%), Query Frame = 0

Query:    1 DGVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDEL 167
            +G GGVDLYVGGVEHAVLHLLYSRFWHKVL+DLGHVS  EPFKRLINQGYIQAAAFQD+R IYV A  VEGDA  GFT DG PVTR+FGKMGKSLKNSVTPDDMY+A+GADTLRLYEMSM PI QDRPWETRSVVGS RLLQRVWRN+VDE+TGEL V+D+   +EL
Sbjct:  637 EGAGGVDLYVGGVEHAVLHLLYSRFWHKVLFDLGHVSTAEPFKRLINQGYIQAAAFQDEREIYVXAASVEGDAQXGFTFDGTPVTRSFGKMGKSLKNSVTPDDMYAAFGADTLRLYEMSMAPITQDRPWETRSVVGSQRLLQRVWRNIVDEQTGELAVSDDAPSEEL 803

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A2A5YXV9_9ACTN (Leucine--tRNA ligase n=3 Tax=Acidimicrobiales TaxID=84993 RepID=A0A2A5YXV9_9ACTN)

HSP 1 Score: 283 bits (725), Expect = 3.200e-87
Identity = 134/168 (79.76%), Postives = 152/168 (90.48%), Query Frame = 0

Query:    2 GVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDELRK 169
            GVGGVDLYVGGVEHAVLHLLY+RFWHKVL+DLGHVSGPEPF+RL NQGYIQAAA+QDDRGIYV A++V  D  D F+++G PV+R+FGKMGKSLKNSVTPDDMYSAYGADTLRLYEM MGP+DQDRPWET+SV+GSHRLLQRVWRNL+DE +G  TV D+P  D LR+
Sbjct:  642 GVGGVDLYVGGVEHAVLHLLYARFWHKVLFDLGHVSGPEPFQRLYNQGYIQAAAYQDDRGIYVEAEKVIEDKGD-FSYNGAPVSRSFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMFMGPLDQDRPWETKSVIGSHRLLQRVWRNLIDENSGATTVVDDPPTDSLRR 808

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A520XPL6_9ACTN (Leucine--tRNA ligase (Fragment) n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XPL6_9ACTN)

HSP 1 Score: 267 bits (683), Expect = 3.090e-85
Identity = 130/166 (78.31%), Postives = 144/166 (86.75%), Query Frame = 0

Query:    4 GGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDELRK 169
            GGVDLYVGGVEHAVLHLLYSRFWHKVL+DLGHV+  EPFKRLINQGYIQA AF D RGIYV A +V  +   G+ ++G+PVTR +GKMGKSLKN+VTPDDMY  YGADTLRLYEM MGPIDQDRPWET+SVVGS RLLQRVWRNLVDE++GE TV D PA DELR+
Sbjct:  171 GGVDLYVGGVEHAVLHLLYSRFWHKVLFDLGHVTTAEPFKRLINQGYIQAFAFVDARGIYVEAADVV-EVPGGYEYEGQPVTREYGKMGKSLKNAVTPDDMYEQYGADTLRLYEMFMGPIDQDRPWETKSVVGSQRLLQRVWRNLVDEDSGEPTVDDSPASDELRR 335

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BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Match: A0A7C1YAV7_9ACTN (Leucine--tRNA ligase n=1 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A7C1YAV7_9ACTN)

HSP 1 Score: 278 bits (710), Expect = 4.090e-85
Identity = 129/169 (76.33%), Postives = 149/169 (88.17%), Query Frame = 0

Query:    2 GVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGYIQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVTPDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVDEETGELTVTDEPADDELRKA 170
            GVGGVDLYVGGVEHAVLHLLY+RFWHKVLYDLGHVSGPEPF RL NQGYIQAAAFQD RG+YVPA EV  +    FT+ G+PV R FGKMGKSL+N+VTPD+MY +YGADTLRLYEM MGP+DQDRPWET+SV+GSHRLLQRVWRNL+DE+TG+  ++D  A +ELR++
Sbjct:  632 GVGGVDLYVGGVEHAVLHLLYARFWHKVLYDLGHVSGPEPFSRLYNQGYIQAAAFQDSRGVYVPAAEVVEEPDGSFTYQGQPVERIFGKMGKSLRNAVTPDEMYESYGADTLRLYEMFMGPMDQDRPWETKSVIGSHRLLQRVWRNLIDEQTGQPNISDVEAPEELRRS 800

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig125787.5217.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7X6ATU3_9ACTN	2.740e-102	86.90	Leucine--tRNA ligase n=1 Tax=Actinomycetia bacteri...	[more]
A0A7K1Z6G4_9ACTN	3.260e-94	85.80	Leucine--tRNA ligase n=2 Tax=Acidimicrobiaceae bac...	[more]
A0A2D7RZT1_9ACTN	7.920e-92	80.00	Leucine--tRNA ligase (Fragment) n=2 Tax=Acidimicro...	[more]
A0A6N9ERV4_9ACTN	1.680e-91	84.34	Leucine--tRNA ligase n=6 Tax=Acidimicrobiaceae bac...	[more]
A0A7K2E7V0_9ACTN	2.330e-90	83.13	Leucine--tRNA ligase n=2 Tax=Acidimicrobiaceae bac...	[more]
A0A6B0WNU6_9ACTN	2.670e-90	83.73	Leucine--tRNA ligase n=4 Tax=Acidimicrobiaceae bac...	[more]
A0A2D6U688_9ACTN	1.110e-87	82.63	Leucine--tRNA ligase n=5 Tax=Acidimicrobiaceae bac...	[more]
A0A2A5YXV9_9ACTN	3.200e-87	79.76	Leucine--tRNA ligase n=3 Tax=Acidimicrobiales TaxI...	[more]
A0A520XPL6_9ACTN	3.090e-85	78.31	Leucine--tRNA ligase (Fragment) n=1 Tax=Acidimicro...	[more]
A0A7C1YAV7_9ACTN	4.090e-85	76.33	Leucine--tRNA ligase n=1 Tax=Acidimicrobiales bact...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR002302	Leucine-tRNA ligase	PRINTS	PR00985	TRNASYNTHLEU	coord: 6..28 score: 78.72 coord: 39..49 score: 66.51
IPR002302	Leucine-tRNA ligase	PANTHER	PTHR43740	FAMILY NOT NAMED	coord: 5..161
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 2..58 e-value: 2.9E-20 score: 74.9
None	No IPR available	GENE3D	1.10.730.10		coord: 74..170 e-value: 4.8E-23 score: 83.5
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 6..137

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig125787	contig	M-pyrifera_M_contig125787:2..511 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig125787.5217.1	mRNA_M-pyrifera_M_contig125787.5217.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig125787 2..511 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig125787.5217.1 ID=prot_M-pyrifera_M_contig125787.5217.1|Name=mRNA_M-pyrifera_M_contig125787.5217.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
DGVGGVDLYVGGVEHAVLHLLYSRFWHKVLYDLGHVSGPEPFKRLINQGY
IQAAAFQDDRGIYVPADEVEGDAADGFTHDGEPVTRNFGKMGKSLKNSVT
PDDMYSAYGADTLRLYEMSMGPIDQDRPWETRSVVGSHRLLQRVWRNLVD
EETGELTVTDEPADDELRKA

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR002302	Leu-tRNA-ligase
IPR014729	Rossmann-like_a/b/a_fold