prot_M-pyrifera_M_contig125753.5204.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig125753.5204.1
Unique Name	prot_M-pyrifera_M_contig125753.5204.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	139

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S4M9B2_9EUKA (Arginine--tRNA ligase n=1 Tax=Vannella sp. CB-2014 TaxID=1487602 RepID=A0A7S4M9B2_9EUKA)

HSP 1 Score: 136 bits (342), Expect = 1.550e-34
Identity = 70/136 (51.47%), Postives = 94/136 (69.12%), Query Frame = 0

Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            +RD +  D ++  KG CAR +K D V Y+  L  AL A +   E P   LRD +A NG++N+F+NR ++F      V  LG +YG S++  GQ++IIEHTS+NPNGPLHIGNLRN ++GAHL+KL  AVGYEV+QH
Sbjct:   45 TRDSSNGDFTVILKGACAR-RKIDVVKYSNELTEALNAFL--KENPKSYLRDSNAMNGYVNLFVNRSSIFEDTIKTVLGLGEKYGSSDKMAGQKVIIEHTSSNPNGPLHIGNLRNVMLGAHLSKLFEAVGYEVKQH 177

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S0R1X4_9CHLO (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Pyramimonas obovata TaxID=1411642 RepID=A0A7S0R1X4_9CHLO)

HSP 1 Score: 123 bits (308), Expect = 4.940e-32
Identity = 64/136 (47.06%), Postives = 93/136 (68.38%), Query Frame = 0

Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            SRDL KADL+M +  +CA+ +K +   +T  LA  +   ++A  A   L+  V+    +LNVFLNR   F     AV +LG+++GH ++  G++++IEHTSANPN PLHIGNLRN ++GAHLA ++ AVGY+V+QH
Sbjct:   44 SRDLEKADLTMLWAPVCAK-RKMNPAKFTAELADFINEKLSA-NADGLLVSKVAGVGPYLNVFLNRGETFRLTVRAVLKLGAKFGHVDQNAGKKVVIEHTSANPNAPLHIGNLRNVMIGAHLANIMKAVGYDVKQH 177

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S0SHG2_9CHLO (Arginine--tRNA ligase n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0SHG2_9CHLO)

HSP 1 Score: 120 bits (302), Expect = 4.280e-29
Identity = 66/135 (48.89%), Postives = 90/135 (66.67%), Query Frame = 0

Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            SRDLAKAD ++Q+    A+ +K + VAY   LA  L+A I    +P  L+  VS    +LN+F++R  VF  A  AV   G+ +GH+    G+R+IIEHTS+NPN PLHIGNLRN ++GAHLAK+ AA G+ V+Q
Sbjct:   44 SRDLAKADFTVQWSAFAAK-RKLNPVAYVTELAAGLQARIDG-SSPRGLITRVSGVGPYLNLFVDRARVFRLALRAVAHAGNTFGHTNAAGGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLAKMQAACGFSVKQ 176

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7S2T8X7_9CHLO (Arginine--tRNA ligase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S2T8X7_9CHLO)

HSP 1 Score: 119 bits (299), Expect = 1.110e-28
Identity = 68/142 (47.89%), Postives = 95/142 (66.90%), Query Frame = 0

Query:    1 MILSRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIA---APEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            M +SR L + D ++Q   LCARAK    V   +A+A AL+A +A   A EA  +L++ V+A   +LNV LNR  V+     AV   G+ YG ++  KG+R+I+EHTS+NPN PLHIGNLRN ++GAH A+L+ +VG EV+QH
Sbjct:   55 MEMSRRLDQGDFAVQLAPLCARAKTNP-VQGAKAIAEALQASLASLSATEAATRLVKGVAAAGPYLNVSLNRPLVYKRVVEAVASRGAEYGVTDLWKGKRVIVEHTSSNPNAPLHIGNLRNVMIGAHAARLIQSVGAEVKQH 195

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A5B8N0V1_9CHLO (Arginine--tRNA ligase n=1 Tax=Chloropicon primus TaxID=1764295 RepID=A0A5B8N0V1_9CHLO)

HSP 1 Score: 108 bits (270), Expect = 9.070e-25
Identity = 57/139 (41.01%), Postives = 90/139 (64.75%), Query Frame = 0

Query:    4 SRDLAKADLSMQFKGLCARAKKKD---AVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH 139
            SR L + D+++Q   +CAR K      A   +E + T L + ++A E   KL++ V+    +LN+FL+R  ++      V  +G+RYG +E  KG+R+++EHTS+NPN PLHIGNLRN ++GAH A+L+ + G +V+QH
Sbjct:   61 SRRLDQGDIAVQLAPVCARVKTNPVHGAKVISEFIMTHLNS-LSADERKGKLVQKVACAGPYLNIFLSRPMMYKRVVEQVLEMGARYGFTEAWKGKRVLVEHTSSNPNAPLHIGNLRNVMIGAHTARLIESAGADVKQH 198

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: K8EIQ7_9CHLO (Arginine--tRNA ligase n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EIQ7_9CHLO)

HSP 1 Score: 108 bits (269), Expect = 1.220e-24
Identity = 54/135 (40.00%), Postives = 87/135 (64.44%), Query Frame = 0

Query:    4 SRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPCKLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            +RDL+KAD ++Q+   CA+ +K +   Y + L+  ++  I         ++ V     ++N+F+ RQ VF  A +A+   G++YG +   +G+++IIEHTS+NPN PLHIGNLRN ++GAHLA+++ A G EV Q
Sbjct:   30 TRDLSKADFTVQWSRFCAK-RKLNPAEYVKNLSETIQKQIEDGAHQDGFIKSVQGVGPYMNIFVKRQKVFKLAINAIIEQGTKYGCTNAGQGKKVIIEHTSSNPNAPLHIGNLRNVMIGAHLARVMQACGCEVTQ 163

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A7R9WC40_9CHLO (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Ostreococcus mediterraneus TaxID=1486918 RepID=A0A7R9WC40_9CHLO)

HSP 1 Score: 94.7 bits (234), Expect = 1.180e-20
Identity = 42/82 (51.22%), Postives = 60/82 (73.17%), Query Frame = 0

Query:   57 SAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            +A   +LN+ LNR  VF  A  +V   G  +GH++  KG+R+IIEHTS+NPN PLHIGNLRN ++GAHLA+L+ A G++ ++
Sbjct:   98 AAAGVYLNMSLNRPKVFEMALRSVASQGETFGHTDAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLARLMKACGHDAKE 179

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: C1E9E9_MICCC (Arginyl-tRNA synthetase (Fragment) n=1 Tax=Micromonas commoda (strain RCC299 / NOUM17 / CCMP2709) TaxID=296587 RepID=C1E9E9_MICCC)

HSP 1 Score: 96.3 bits (238), Expect = 1.390e-20
Identity = 44/87 (50.57%), Postives = 61/87 (70.11%), Query Frame = 0

Query:   52 LLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            L+  V     +LN+F++R  VF     AV   G ++GH++   G+R+IIEHTS+NPN PLHIGNLRN ++GAHLAK+ AA G+ V+Q
Sbjct:    1 LITKVQGVGPYLNLFVDRARVFRLVIRAVSAQGDKFGHTKAAGGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLAKMQAACGFAVKQ 87

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A4S1B0_OSTLU (Arginine--tRNA ligase n=2 Tax=Ostreococcus sp. 'lucimarinus' TaxID=242159 RepID=A4S1B0_OSTLU)

HSP 1 Score: 96.3 bits (238), Expect = 1.820e-20
Identity = 40/77 (51.95%), Postives = 61/77 (79.22%), Query Frame = 0

Query:   62 FLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            ++N+ +NR  VF A   AV R G ++GH++  KG+R+IIEHTS+NPN PLHIGNLRN ++GAHL++++ A G++V++
Sbjct:   36 YVNLKMNRPMVFEATMKAVARRGGKFGHTDAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLSRMMKACGHDVKE 112

[Close]

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Match: A0A1Y5IBF2_OSTTA (Arginine--tRNA ligase n=2 Tax=Ostreococcus tauri TaxID=70448 RepID=A0A1Y5IBF2_OSTTA)

HSP 1 Score: 95.1 bits (235), Expect = 4.690e-20
Identity = 42/77 (54.55%), Postives = 58/77 (75.32%), Query Frame = 0

Query:   62 FLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLIIEHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQ 138
            + N+ LNR  VF A   +  + G+ +GH+   KG+R+IIEHTS+NPN PLHIGNLRN ++GAHLAKL+ A G+EV++
Sbjct:  107 YANMTLNRPMVFEAVMKSAAKQGATFGHTNAAKGKRVIIEHTSSNPNAPLHIGNLRNVMIGAHLAKLMKACGHEVQE 183

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig125753.5204.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A7S4M9B2_9EUKA	1.550e-34	51.47	Arginine--tRNA ligase n=1 Tax=Vannella sp. CB-2014...	[more]
A0A7S0R1X4_9CHLO	4.940e-32	47.06	Arginyl-tRNA synthetase (Fragment) n=1 Tax=Pyramim...	[more]
A0A7S0SHG2_9CHLO	4.280e-29	48.89	Arginine--tRNA ligase n=1 Tax=Mantoniella antarcti...	[more]
A0A7S2T8X7_9CHLO	1.110e-28	47.89	Arginine--tRNA ligase n=1 Tax=Chloropicon roscoffe...	[more]
A0A5B8N0V1_9CHLO	9.070e-25	41.01	Arginine--tRNA ligase n=1 Tax=Chloropicon primus T...	[more]
K8EIQ7_9CHLO	1.220e-24	40.00	Arginine--tRNA ligase n=1 Tax=Bathycoccus prasinos...	[more]
A0A7R9WC40_9CHLO	1.180e-20	51.22	Arginyl-tRNA synthetase (Fragment) n=1 Tax=Ostreoc...	[more]
C1E9E9_MICCC	1.390e-20	50.57	Arginyl-tRNA synthetase (Fragment) n=1 Tax=Micromo...	[more]
A4S1B0_OSTLU	1.820e-20	51.95	Arginine--tRNA ligase n=2 Tax=Ostreococcus sp. 'lu...	[more]
A0A1Y5IBF2_OSTTA	4.690e-20	54.55	Arginine--tRNA ligase n=2 Tax=Ostreococcus tauri T...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001278	Arginine-tRNA ligase	PRINTS	PR01038	TRNASYNTHARG	coord: 112..128 score: 40.74 coord: 97..112 score: 44.91
IPR001278	Arginine-tRNA ligase	PANTHER	PTHR11956	ARGINYL-TRNA SYNTHETASE	coord: 11..138
IPR035684	Arginyl-tRNA synthetase, catalytic core domain	PFAM	PF00750	tRNA-synt_1d	coord: 90..136 e-value: 9.9E-6 score: 24.7
IPR036695	Arginyl tRNA synthetase N-terminal domain superfamily	GENE3D	3.30.1360.70		coord: 2..92 e-value: 2.7E-6 score: 29.6
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 94..139 e-value: 2.8E-14 score: 55.2
None	No IPR available	PANTHER	PTHR11956:SF7		coord: 11..138
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 93..137
IPR001412	Aminoacyl-tRNA synthetase, class I, conserved site	PROSITE	PS00178	AA_TRNA_LIGASE_I	coord: 107..116

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig125753	contig	M-pyrifera_M_contig125753:97..513 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig125753.5204.1	mRNA_M-pyrifera_M_contig125753.5204.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig125753 91..513 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig125753.5204.1 ID=prot_M-pyrifera_M_contig125753.5204.1|Name=mRNA_M-pyrifera_M_contig125753.5204.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=139bp
MILSRDLAKADLSMQFKGLCARAKKKDAVAYTEALATALRAHIAAPEAPC
KLLRDVSAENGFLNVFLNRQNVFSAAFSAVERLGSRYGHSEEKKGQRLII
EHTSANPNGPLHIGNLRNSLVGAHLAKLLAAVGYEVRQH

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR001278	Arg-tRNA-ligase
IPR035684	ArgRS_core
IPR036695	Arg-tRNA-synth_N_sf
IPR014729	Rossmann-like_a/b/a_fold
IPR001412	aa-tRNA-synth_I_CS