prot_M-pyrifera_M_contig125740.5202.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125740.5202.1
Unique Nameprot_M-pyrifera_M_contig125740.5202.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length105
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: A0A142BZ12_ZIZJJ (Cytochrome c oxidase subunit 2 n=20 Tax=Magnoliopsida TaxID=3398 RepID=A0A142BZ12_ZIZJJ)

HSP 1 Score: 210 bits (534), Expect = 1.090e-66
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQIS SVQREGVYYGQCSEICGTNHAF PIVVEAVPRKDYGSRVSNQLIPQTGEA
Sbjct:  157 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFTPIVVEAVPRKDYGSRVSNQLIPQTGEA 260
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: E9P2B4_RICCO (Cytochrome c oxidase subunit 2 n=32 Tax=Pentapetalae TaxID=1437201 RepID=E9P2B4_RICCO)

HSP 1 Score: 209 bits (532), Expect = 2.190e-66
Identity = 102/104 (98.08%), Postives = 102/104 (98.08%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVT ADVPHSWAVPSSGVKCDAVPGRLNQIS SVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA
Sbjct:  157 GQSRLLEVDNRVVVPAKTHLRIIVTSADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 260
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: A0A455LQM3_GOSHI (Cytochrome c oxidase subunit 2 n=7 Tax=rosids TaxID=71275 RepID=A0A455LQM3_GOSHI)

HSP 1 Score: 207 bits (526), Expect = 1.780e-65
Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVT ADVPHSWAVPSSGVKCDAVPGRLNQIS SVQREGVYYGQCSEICGTNHAF PIVVEAVPRKDYGSRVSNQLIPQTGEA
Sbjct:  157 GQSRLLEVDNRVVVPAKTHLRIIVTSADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFTPIVVEAVPRKDYGSRVSNQLIPQTGEA 260
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: A0A8F2YVH5_ROBPS (Cytochrome c oxidase subunit 2 n=1 Tax=Robinia pseudoacacia TaxID=35938 RepID=A0A8F2YVH5_ROBPS)

HSP 1 Score: 205 bits (522), Expect = 2.850e-65
Identity = 100/104 (96.15%), Postives = 100/104 (96.15%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPS GVKCDAVPGRLNQIS SVQREGVYYGQCSEICGTNHAF PIVVEAVP KDYGSRVSNQLIPQTGEA
Sbjct:  127 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFTPIVVEAVPSKDYGSRVSNQLIPQTGEA 230
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: UPI001FF4D8FF (cytochrome c oxidase subunit 2 n=1 Tax=Potentilla micrantha TaxID=57941 RepID=UPI001FF4D8FF)

HSP 1 Score: 206 bits (524), Expect = 3.810e-65
Identity = 101/104 (97.12%), Postives = 101/104 (97.12%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVTPADV HSWAVPSSGVKCDAVPGRLNQIS SVQREGVYYGQCSEICGTNHAF PIVVEAVPRKDYGSRVSNQLIPQTGEA
Sbjct:  159 GQSRLLEVDNRVVVPAKTHLRIIVTPADVLHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFTPIVVEAVPRKDYGSRVSNQLIPQTGEA 262
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: G3EJ04_CUCSA (Cytochrome c oxidase subunit 2 n=9 Tax=rosids TaxID=71275 RepID=G3EJ04_CUCSA)

HSP 1 Score: 205 bits (521), Expect = 1.020e-64
Identity = 99/104 (95.19%), Postives = 101/104 (97.12%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVV+PAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQIS  VQREGVYYGQCSEICGTNHAF PIVVEAVPRKDYGSRVSNQLIPQ+GEA
Sbjct:  157 GQSRLLEVDNRVVLPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTPIVVEAVPRKDYGSRVSNQLIPQSGEA 260
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: A0A872PL77_GLYUR (Cytochrome c oxidase subunit 2 n=3 Tax=Pentapetalae TaxID=1437201 RepID=A0A872PL77_GLYUR)

HSP 1 Score: 205 bits (522), Expect = 1.360e-64
Identity = 100/104 (96.15%), Postives = 100/104 (96.15%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPS GVKCDAVPGRLNQIS SVQREGVYYGQCSEICGTNHAF PIVVEAVP KDYGSRVSNQLIPQTGEA
Sbjct:  178 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSLGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFTPIVVEAVPSKDYGSRVSNQLIPQTGEA 281
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: F8K8R9_BRANA (Cytochrome c oxidase subunit 2 n=13 Tax=Brassiceae TaxID=981071 RepID=F8K8R9_BRANA)

HSP 1 Score: 204 bits (520), Expect = 1.450e-64
Identity = 100/104 (96.15%), Postives = 100/104 (96.15%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVT ADVPHSWAVPSSGVKCDAVPGRLNQIS  VQREGVYYGQCSEICGTNHAF PIVVEAVPRKDYGSRVSNQLIPQTGEA
Sbjct:  157 GQSRLLEVDNRVVVPAKTHLRIIVTSADVPHSWAVPSSGVKCDAVPGRLNQISILVQREGVYYGQCSEICGTNHAFTPIVVEAVPRKDYGSRVSNQLIPQTGEA 260
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: COX2_DAUCA (Cytochrome c oxidase subunit 2 n=36 Tax=asterids TaxID=71274 RepID=COX2_DAUCA)

HSP 1 Score: 204 bits (518), Expect = 3.010e-64
Identity = 100/104 (96.15%), Postives = 100/104 (96.15%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVPAKTHLRIIVT ADVPHSWAVPSSGVKCDAVPGRLNQIS SVQREGVYYGQCSEICGTNHAF PIVVEAV RKDYGSRVSNQLIPQTGEA
Sbjct:  158 GQSRLLEVDNRVVVPAKTHLRIIVTSADVPHSWAVPSSGVKCDAVPGRLNQISISVQREGVYYGQCSEICGTNHAFTPIVVEAVSRKDYGSRVSNQLIPQTGEA 261
[Close]
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Match: A0A1D6YXL4_9LAMI (Cytochrome c oxidase subunit 2 n=36 Tax=lamiids TaxID=91888 RepID=A0A1D6YXL4_9LAMI)

HSP 1 Score: 203 bits (517), Expect = 4.130e-64
Identity = 99/104 (95.19%), Postives = 99/104 (95.19%), Query Frame = 0 
Query:    1 GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLNQISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGEA 104
            GQSRLLEVDNRVVVP KTHLRIIVTPADVPHSWAVPS GVKCDAVPGRLNQ S SVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTG A
Sbjct:  157 GQSRLLEVDNRVVVPEKTHLRIIVTPADVPHSWAVPSLGVKCDAVPGRLNQTSISVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQTGGA 260
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125740.5202.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A142BZ12_ZIZJJ1.090e-6698.08Cytochrome c oxidase subunit 2 n=20 Tax=Magnoliops... [more]
E9P2B4_RICCO2.190e-6698.08Cytochrome c oxidase subunit 2 n=32 Tax=Pentapetal... [more]
A0A455LQM3_GOSHI1.780e-6597.12Cytochrome c oxidase subunit 2 n=7 Tax=rosids TaxI... [more]
A0A8F2YVH5_ROBPS2.850e-6596.15Cytochrome c oxidase subunit 2 n=1 Tax=Robinia pse... [more]
UPI001FF4D8FF3.810e-6597.12cytochrome c oxidase subunit 2 n=1 Tax=Potentilla ... [more]
G3EJ04_CUCSA1.020e-6495.19Cytochrome c oxidase subunit 2 n=9 Tax=rosids TaxI... [more]
A0A872PL77_GLYUR1.360e-6496.15Cytochrome c oxidase subunit 2 n=3 Tax=Pentapetala... [more]
F8K8R9_BRANA1.450e-6496.15Cytochrome c oxidase subunit 2 n=13 Tax=Brassiceae... [more]
COX2_DAUCA3.010e-6496.15Cytochrome c oxidase subunit 2 n=36 Tax=asterids T... [more]
A0A1D6YXL4_9LAMI4.130e-6495.19Cytochrome c oxidase subunit 2 n=36 Tax=lamiids Ta... [more]

Pages

back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePRINTSPR01166CYCOXIDASEIIcoord: 48..65
score: 56.83
coord: 4..25
score: 58.73
coord: 66..83
score: 77.49
coord: 28..48
score: 73.78
NoneNo IPR availablePANTHERPTHR22888CYTOCHROME C OXIDASE, SUBUNIT IIcoord: 1..101
NoneNo IPR availablePANTHERPTHR22888:SF9CYTOCHROME C OXIDASE SUBUNIT 2coord: 1..101
IPR002429Cytochrome c oxidase subunit II-like C-terminalPFAMPF00116COX2coord: 1..84
e-value: 3.0E-41
score: 140.1
IPR002429Cytochrome c oxidase subunit II-like C-terminalPROSITEPS50857COX2_CUAcoord: 1..95
score: 33.15
IPR008972CupredoxinGENE3D2.60.40.420coord: 1..97
e-value: 4.4E-39
score: 135.3
IPR008972CupredoxinSUPERFAMILY49503Cupredoxinscoord: 2..95
IPR001505Copper centre Cu(A)PROSITEPS00078COX2coord: 29..77

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125740contigM-pyrifera_M_contig125740:198..512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125740.5202.1mRNA_M-pyrifera_M_contig125740.5202.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125740 198..512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125740.5202.1 ID=prot_M-pyrifera_M_contig125740.5202.1|Name=mRNA_M-pyrifera_M_contig125740.5202.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=105bp
GQSRLLEVDNRVVVPAKTHLRIIVTPADVPHSWAVPSSGVKCDAVPGRLN
QISTSVQREGVYYGQCSEICGTNHAFMPIVVEAVPRKDYGSRVSNQLIPQ
TGEA*
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002429CcO_II-like_C
IPR008972Cupredoxin
IPR001505Copper_CuA