prot_M-pyrifera_M_contig125703.5193.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125703.5193.1
Unique Nameprot_M-pyrifera_M_contig125703.5193.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: L8HB96_ACACA (tRNA pseudouridine synthase D, putative n=2 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8HB96_ACACA)

HSP 1 Score: 125 bits (315), Expect = 1.360e-30
Identity = 67/138 (48.55%), Postives = 85/138 (61.59%), Query Frame = 0
Query:   11 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGC-VEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVLV 147
            GFVNYYGLQRFGTG+V T  VG  +L   W     L+L PR  + +  + AR+Y+  TGD  G  R +PR   +E+ LL   Q+ G  +H AAF  L   +RMLY H+YQS VWN  AS RV + G+DK   GDLVL+
Sbjct:  404 GFVNYYGLQRFGTGSVATHRVGIALLQGQWKEAADLILQPRTGEEQECESARKYWAETGDINGTLRKLPRQLFIERLLLQGYQKMGKTQHLAAFQTLPRNLRMLYPHSYQSYVWNCMASERVRKYGADKPVVGDLVLL 541          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: F0ZJ83_DICPU (TRUD domain-containing protein n=1 Tax=Dictyostelium purpureum TaxID=5786 RepID=F0ZJ83_DICPU)

HSP 1 Score: 122 bits (305), Expect = 2.560e-29
Identity = 63/137 (45.99%), Postives = 91/137 (66.42%), Query Frame = 0
Query:   11 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGC-VEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 146
            GF+NY+GLQRFGTG++ T E+G  ++  +W   V L+LDPRE +     +AR+Y+K+TGDA     M+PRG   E++LL AL+  G+  +  AF+ +   +RMLY H+YQS +WN  AS+R+   G DK   GDLV+
Sbjct:  302 GFINYFGLQRFGTGSIPTYEIGIAMIQNNWKKAVDLILDPREGEREEATKARQYYKDTGDAKTTITMLPRGLNAEKKLLIALKG-GSTNYQDAFYSIPRTLRMLYTHSYQSLIWNLMASQRIEMFGFDKPIVGDLVI 437          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A662WIM2_9STRA (TRUD domain-containing protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662WIM2_9STRA)

HSP 1 Score: 120 bits (301), Expect = 1.080e-28
Identity = 63/145 (43.45%), Postives = 90/145 (62.07%), Query Frame = 0
Query:    3 AASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 146
            A  +W+S GF+NY+GLQRFGT  + T E+GR +L RD+   V LLL P+E D+  + +AR+ F++T D G A R +P   + E+ +L  L+  G   +S A   +   +RM+Y HAYQS VWN  AS R+T+   D    GDLV+
Sbjct:  428 AVRSWSSRGFINYFGLQRFGTKAIATHEIGRAILQRDYKRVVDLLLAPQEGDASKIREARQAFQDTQDVGAALRALPPYLIAERAVLQGLRTHGLTSYSTAIQSIPRHLRMMYTHAYQSYVWNTVASERLTQFSRDSPVLGDLVI 572          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A803PZ05_CANSA (TRUD domain-containing protein n=2 Tax=Cannabis sativa TaxID=3483 RepID=A0A803PZ05_CANSA)

HSP 1 Score: 117 bits (292), Expect = 1.670e-27
Identity = 62/148 (41.89%), Postives = 88/148 (59.46%), Query Frame = 0
Query:    2 AAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVLVAE 149
            AAASA    GF+NY+GLQRFG+G+V T  +G ++L  +W   V ++LDPRE +   +  AR+Y+K T D  G  R +PR  V ++ +    +     H  A   +   +RM+Y H+YQS +WN AAS RV + G+D V  GDLV   E
Sbjct:  296 AAASALGRQGFINYFGLQRFGSGSVPTYLIGSKLLRGEWEAAVNMILDPREGERNTIAMARQYYKETNDIDGTLRQLPRYLVAERAVLQCLKKCPGNHLQALKAIPRTLRMMYVHSYQSYLWNHAASTRVQKHGTDHVVVGDLVYCKE 443          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A1V9ZSP4_9STRA (tRNA pseudouridine synthase D (TruD) n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZSP4_9STRA)

HSP 1 Score: 117 bits (292), Expect = 1.780e-27
Identity = 63/145 (43.45%), Postives = 89/145 (61.38%), Query Frame = 0
Query:    3 AASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 146
            A  +WAS GFVNY+GLQRFGT ++ +  VGR +L +D+ G V L+L P+E D+  + +AR +F+   D   A RM P   V E  +L    RFG D H  A  ++ + +RM+Y HAYQS +WN AAS R+ +  +     GD+VL
Sbjct:  443 AVKSWASMGFVNYFGLQRFGTKSIPSHVVGRTLLRKDFKGAVDLILGPKEGDASKIKEARVHFQQYKDISAALRMFPPFLVAEVAVLEGFSRFGLDAHERAIRNIPTKLRMIYTHAYQSYIWNEAASYRLQKYSNTAPVVGDMVL 587          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: UPI000CED2A92 (pseudouridylate synthase 7 homolog n=1 Tax=Eutrema salsugineum TaxID=72664 RepID=UPI000CED2A92)

HSP 1 Score: 116 bits (291), Expect = 2.320e-27
Identity = 58/135 (42.96%), Postives = 85/135 (62.96%), Query Frame = 0
Query:   11 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLV 145
            GF+NY+GLQRFG+G+V T  VG  VL  +W   V ++LDPRE +  V+++AR Y+K TGD  G  R +PR  V ++ +    +     +  A   +   +RM+Y H+YQS +WN AAS RV + G+++V  GDLV
Sbjct:  347 GFINYFGLQRFGSGSVPTHHVGAAVLKGEWKEAVDMILDPRESEKNVVNEAREYYKETGDIDGTLRQLPRYLVAERAILQCLKKCPGNYLQALKGIPRTLRMMYVHSYQSYLWNNAASLRVQKYGTNQVVLGDLV 481          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A5D6YSG9_9STRA (TRUD domain-containing protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YSG9_9STRA)

HSP 1 Score: 116 bits (290), Expect = 3.280e-27
Identity = 64/147 (43.54%), Postives = 92/147 (62.59%), Query Frame = 0
Query:    1 NAAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 146
            +AA ++W + GFVNY+GLQRFGT +V T EVGR +L RD++  V L+L P+E D+  + +AR  F+   D   A R +P   + E+ LL  L+ +G   H+ A   +   +RM+Y H+YQS VWN  AS RV++  SD    GDLV+
Sbjct:  419 HAAVASWTARGFVNYFGLQRFGTKSVPTHEVGRAILQRDYARVVDLVLQPQEGDATKIAEARARFQADQDVEAALRALPPYLIAERALLQGLKTYGLGAHAQAIQCIPRHLRMMYTHSYQSFVWNMVASDRVSQFASDAPVVGDLVI 565          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: UPI0006449C31 (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI0006449C31)

HSP 1 Score: 115 bits (289), Expect = 4.100e-27
Identity = 65/142 (45.77%), Postives = 90/142 (63.38%), Query Frame = 0
Query:   11 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCV-EQQLLWALQRFGTDK--HSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVLVAE 149
            GF+NYYGLQRFGTG++ T+EVG+ ++  +W   V L+L PRE +   + QAR+ +K+TGD     R +PR  + E  +L  LQ+   DK  +  AF++L   +RMLY H+YQS +WN  AS R+   G DK   GDLV V E
Sbjct:  285 GFINYYGLQRFGTGSISTNEVGKAIIRGEWQQVVNLILCPREGERPDLQQARQAYKDTGDIAPLIRALPRFMMAEHAVLKGLQK---DKKGYQNAFNNLPRTLRMLYPHSYQSLIWNRMASERIKMFGFDKPVVGDLVSVGE 423          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A5N5H0P9_9ROSA (Multisubstrate pseudouridine synthase 7-like n=1 Tax=Pyrus ussuriensis x Pyrus communis TaxID=2448454 RepID=A0A5N5H0P9_9ROSA)

HSP 1 Score: 115 bits (289), Expect = 4.770e-27
Identity = 62/148 (41.89%), Postives = 89/148 (60.14%), Query Frame = 0
Query:    2 AAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDS---RVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVL 146
            A+ASA    GF+NY+GLQRFG+G+V T  +G  +L  +W  TV++ LDPRE D     V+ +AR Y+K T D  G  R +PR  V ++ +    +     +  A   +   +RM+Y H+YQS +WN AAS RV + G+D+V  GDLV 
Sbjct:  331 ASASALGKQGFINYFGLQRFGSGSVPTHHIGASLLRGEWKSTVSMFLDPREGDILFVNVITEAREYYKETNDIEGTLRKLPRHLVSERAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVKKYGTDRVVLGDLVF 478          
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Match: A0A251NZU1_PRUPE (TRUD domain-containing protein n=11 Tax=Prunus TaxID=3754 RepID=A0A251NZU1_PRUPE)

HSP 1 Score: 115 bits (288), Expect = 5.930e-27
Identity = 57/135 (42.22%), Postives = 83/135 (61.48%), Query Frame = 0
Query:   11 GFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDPREHDSRVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHSAAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLV 145
            GF+NY+GLQRFG+G+V T  +G  +L  +W  TV+L LDPRE +   + +AR Y+K T D  G  R +PR  V ++ +    +     +  A   +   +RM+Y H+YQS +WN AAS RV + G+D+V  GDLV
Sbjct:  336 GFINYFGLQRFGSGSVPTHLIGATLLRGEWKSTVSLFLDPREGEKNAITEAREYYKETNDIEGTLRQLPRHLVSEKAILQCLKKCPGNYLQALKAIPRTLRMMYVHSYQSYLWNHAASMRVQKYGTDRVVLGDLV 470          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125703.5193.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
L8HB96_ACACA1.360e-3048.55tRNA pseudouridine synthase D, putative n=2 Tax=Ac... [more]
F0ZJ83_DICPU2.560e-2945.99TRUD domain-containing protein n=1 Tax=Dictyosteli... [more]
A0A662WIM2_9STRA1.080e-2843.45TRUD domain-containing protein n=2 Tax=Nothophytop... [more]
A0A803PZ05_CANSA1.670e-2741.89TRUD domain-containing protein n=2 Tax=Cannabis sa... [more]
A0A1V9ZSP4_9STRA1.780e-2743.45tRNA pseudouridine synthase D (TruD) n=1 Tax=Achly... [more]
UPI000CED2A922.320e-2742.96pseudouridylate synthase 7 homolog n=1 Tax=Eutrema... [more]
A0A5D6YSG9_9STRA3.280e-2743.54TRUD domain-containing protein n=1 Tax=Pythium bra... [more]
UPI0006449C314.100e-2745.77hypothetical protein n=1 Tax=Acytostelium subglobo... [more]
A0A5N5H0P9_9ROSA4.770e-2741.89Multisubstrate pseudouridine synthase 7-like n=1 T... [more]
A0A251NZU1_PRUPE5.930e-2742.22TRUD domain-containing protein n=11 Tax=Prunus Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR042214Pseudouridine synthase, TruD, catalytic domainGENE3D3.30.2350.20coord: 90..155
e-value: 2.4E-7
score: 32.4
IPR001656Pseudouridine synthase, TruDPFAMPF01142TruDcoord: 8..150
e-value: 1.8E-28
score: 99.5
IPR001656Pseudouridine synthase, TruDPANTHERPTHR13326TRNA PSEUDOURIDINE SYNTHASE Dcoord: 2..149
NoneNo IPR availablePANTHERPTHR13326:SF21PSEUDOURIDYLATE SYNTHASE 7 HOMOLOGcoord: 2..149
IPR011760Pseudouridine synthase, TruD, insertion domainPROSITEPS50984TRUDcoord: 11..155
score: 26.695
IPR020103Pseudouridine synthase, catalytic domain superfamilySUPERFAMILY55120Pseudouridine synthasecoord: 5..149

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125703contigM-pyrifera_M_contig125703:48..512 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125703.5193.1mRNA_M-pyrifera_M_contig125703.5193.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125703 48..512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125703.5193.1 ID=prot_M-pyrifera_M_contig125703.5193.1|Name=mRNA_M-pyrifera_M_contig125703.5193.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
NAAASAWASAGFVNYYGLQRFGTGTVRTDEVGRRVLARDWSGTVALLLDP
REHDSRVMDQARRYFKNTGDAGGAARMMPRGCVEQQLLWALQRFGTDKHS
AAFHDLASPMRMLYAHAYQSAVWNAAASRRVTEAGSDKVAEGDLVLVAEG
EESGE
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR042214TruD_catalytic
IPR001656PsdUridine_synth_TruD
IPR011760PsdUridine_synth_TruD_insert
IPR020103PsdUridine_synth_cat_dom_sf