prot_M-pyrifera_M_contig125700.5191.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125700.5191.1
Unique Nameprot_M-pyrifera_M_contig125700.5191.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length163
Homology
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BLAST of mRNA_M-pyrifera_M_contig125700.5191.1 vs. uniprot
Match: A0A507F7D2_9FUNG (U3 small nucleolar RNA-associated protein 10 n=1 Tax=Chytriomyces confervae TaxID=246404 RepID=A0A507F7D2_9FUNG)

HSP 1 Score: 54.3 bits (129), Expect = 1.740e-5
Identity = 42/160 (26.25%), Postives = 78/160 (48.75%), Query Frame = 0 
Query:    2 RWEWLEITKKHDSGVPRSLLVSEAKRELSILQFLADASKRSVAAKVSSSKAIICLYAAIALEVISSVKVDDRLIQLLLPSLFDGLACSASSDLQAASYMIVVQLAEFTSFTEELASALL-VALCASSRRSVDDTAMVLIHFCQMQSQLTEFPAEALEHLL 160
            +W WL+  +     + R  LV     +L ++QF+ D  ++ +     ++  +   +    +E+ISS ++ D L+++L+P LF  +A     ++QAASYMI+  L+    F+  + SA+  V +  +S       A  L+     Q     F  ++LE LL
Sbjct:  159 KWAWLQAFRDKRVSLDRKTLVQRCVSDLPLIQFICDMMEKLLIPNTPNAS-LCSFFTGTMVELISSTRISDDLMRILMPCLF-AMAALDVPNVQAASYMIMAHLSNKAPFSTPIISAISDVVISHASPDLCKYAACCLVSLYDTQEACPAFSGDSLEVLL 316
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125700.5191.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A507F7D2_9FUNG1.740e-526.25U3 small nucleolar RNA-associated protein 10 n=1 T... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR022125U3 small nucleolar RNA-associated protein 10, N-terminalPFAMPF12397U3snoRNP10coord: 75..162
e-value: 5.2E-14
score: 52.6
IPR040191U3 small nucleolar RNA-associated protein 10PANTHERPTHR13457BAP28coord: 1..163

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125700contigM-pyrifera_M_contig125700:1..489 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125700.5191.1mRNA_M-pyrifera_M_contig125700.5191.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125700 1..489 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125700.5191.1 ID=prot_M-pyrifera_M_contig125700.5191.1|Name=mRNA_M-pyrifera_M_contig125700.5191.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=163bp
TRWEWLEITKKHDSGVPRSLLVSEAKRELSILQFLADASKRSVAAKVSSS
KAIICLYAAIALEVISSVKVDDRLIQLLLPSLFDGLACSASSDLQAASYM
IVVQLAEFTSFTEELASALLVALCASSRRSVDDTAMVLIHFCQMQSQLTE
FPAEALEHLLELP
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR022125U3snoRNP10_N
IPR040191UTP10