prot_M-pyrifera_M_contig125683.5186.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125683.5186.1
Unique Nameprot_M-pyrifera_M_contig125683.5186.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length94
Homology
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: UPI001AB05A18 (AraC family transcriptional regulator n=1 Tax=Pseudomonas schmalbachii TaxID=2816993 RepID=UPI001AB05A18)

HSP 1 Score: 59.3 bits (142), Expect = 5.470e-9
Identity = 33/99 (33.33%), Postives = 50/99 (50.51%), Query Frame = 0
Query:    5 YGACVEVDSLEREYSTAM-----------MARY-LPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            YG C +  + E  Y   +           M ++ +PA KY  FT  G V +IA ++   +  + A    +P   V+ E YDERF+GPDDP++ +DL  P
Sbjct:   51 YGICSQAPTGELHYVAGIRVPDSASLPEGMVKFAVPAQKYAVFTHHGTVEQIADSFQAIYSELLARLGLEPKSGVDFERYDERFSGPDDPEAEVDLYIP 149          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: A0A5R9G371_9BACL (MerR family transcriptional regulator n=2 Tax=Paenibacillus antri TaxID=2582848 RepID=A0A5R9G371_9BACL)

HSP 1 Score: 60.1 bits (144), Expect = 1.360e-8
Identity = 34/90 (37.78%), Postives = 51/90 (56.67%), Query Frame = 0
Query:    2 RWYYGACVEVDSLEREYSTAMMARYLPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            R+ Y A V+VDS+E +    + A+ +PA  Y  FT  G +A +   Y+R  E   A +  + +  ++ ELYDERF GP D +S +DL  P
Sbjct:  201 RFSYMAGVQVDSIE-DVPDGLEAKLVPAQTYAVFTHRGTIAGLQETYERIHETWLAENGLQFAEGIDFELYDERFYGPADERSELDLYIP 289          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: A0A6N7AW91_9FIRM (AraC family transcriptional regulator n=1 Tax=Firmicutes bacterium TaxID=1879010 RepID=A0A6N7AW91_9FIRM)

HSP 1 Score: 58.9 bits (141), Expect = 3.370e-8
Identity = 34/87 (39.08%), Postives = 45/87 (51.72%), Query Frame = 0
Query:    5 YGACVEVDSLEREYSTAMMARYLPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            Y AC EV +++      M+AR +PA KYL FT +G V  +   YD  +         +    V+ ELYDERF  PD P S MD+  P
Sbjct:  197 YMACCEVSAVD-SIPEGMIARTIPACKYLVFTHKGSVDNLGETYDFIYGKYIPNANYEIQSKVDFELYDERFK-PDSPDSEMDIYIP 281          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: A0A0P9DNQ4_9BACL (AraC_E_bind domain-containing protein (Fragment) n=2 Tax=Paenibacillus TaxID=44249 RepID=A0A0P9DNQ4_9BACL)

HSP 1 Score: 55.8 bits (133), Expect = 2.490e-7
Identity = 33/99 (33.33%), Postives = 48/99 (48.48%), Query Frame = 0
Query:    5 YGACVEVD----SLEREYSTA-------MMARYLPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFPA 92
            YG C+       S    Y TA       MM   +P   Y  FT  G ++ +    +  +     LH  +PS  ++LE+YDERFTGP+D Q+++DL  P 
Sbjct:  104 YGVCIPGSNGDFSYIAGYETAGEHIPNGMMTFTVPEQTYAVFTHTGSLSRLGETMELIYSKWLPLHGLEPSQGMDLEVYDERFTGPEDEQTQIDLYIPV 202          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: A0A069Q416_PSEAI (C-di-GMP-binding multidrug transporter transcriptional regulator BrlR n=126 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A069Q416_PSEAI)

HSP 1 Score: 55.1 bits (131), Expect = 7.860e-7
Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 0
Query:    5 YGACVEVDSLEREYSTAM-----------MARY-LPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            YG C +  + E  Y               M R+ +PA KY  FT +G   +IA ++   +  + A    +P   V+ E YD+RF GP DP S++DL  P
Sbjct:  170 YGICAQQPNGEFHYVAGFEVQEGWPVPEGMVRFQVPAQKYAVFTHKGTAPQIAESFQAIYSHLLAERGLEPKAGVDFEYYDQRFRGPLDPNSQVDLYIP 268          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: UPI00138A00C2 (GyrI-like domain-containing protein n=1 Tax=Chengkuizengella sediminis TaxID=1885917 RepID=UPI00138A00C2)

HSP 1 Score: 53.5 bits (127), Expect = 1.120e-6
Identity = 27/87 (31.03%), Postives = 43/87 (49.43%), Query Frame = 0
Query:    5 YGACVEVDSLEREYSTAMMARYLPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            Y + VE+D    E    ++ + +PA++Y  FT +G ++ +  A+   +E         P    + E YDERF GP D  S MD+  P
Sbjct:   77 YVSGVEIDDQTSELPDKIVIKTVPASRYAVFTYKGDMSGVGAAFKYIYETWLPQSGEVPFEDFSFEFYDERFLGPADKNSEMDIYIP 163          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: UPI001CF9BFBE (GyrI-like domain-containing protein n=1 Tax=Bacillus carboniphilus TaxID=86663 RepID=UPI001CF9BFBE)

HSP 1 Score: 53.1 bits (126), Expect = 1.480e-6
Identity = 28/87 (32.18%), Postives = 47/87 (54.02%), Query Frame = 0
Query:    5 YGACVEVDSLEREYSTAMMARYLPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            Y A  EVD +    +   +++ +P+ KYL FT +GP + I  A++  +         +   + + ELYDERF GP+ P+S +D+  P
Sbjct:   74 YLAAFEVDQVNLP-NDQFISKEIPSQKYLVFTHKGPASTIGKAFNDIFNSYLPSTSYEVLNTPSFELYDERFLGPESPESVIDIYIP 159          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: A0A2R3ISZ0_PSEAI (MerR family transcriptional regulator n=5 Tax=Pseudomonas aeruginosa TaxID=287 RepID=A0A2R3ISZ0_PSEAI)

HSP 1 Score: 53.9 bits (128), Expect = 2.050e-6
Identity = 32/99 (32.32%), Postives = 47/99 (47.47%), Query Frame = 0
Query:    5 YGACVEVDSLEREYSTAM-----------MARYL-PAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            YG C +  + E  Y               M R++ PA KY  FT +G   +IA ++   +  + A    +P   V+ E YD+RF GP DP S++DL  P
Sbjct:  170 YGICAQRPNGEFHYVAGFEVQEGWPVPDGMVRFVVPAQKYAVFTHKGTAPQIAESFQAIYSHLLAERGLEPKAGVDFEHYDQRFRGPLDPNSQVDLYIP 268          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: A0A7X3GJQ4_9BACL (MerR family transcriptional regulator n=1 Tax=Paenibacillus sp. MMS18-CY102 TaxID=2682849 RepID=A0A7X3GJQ4_9BACL)

HSP 1 Score: 51.2 bits (121), Expect = 1.990e-5
Identity = 23/65 (35.38%), Postives = 37/65 (56.92%), Query Frame = 0
Query:   27 LPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFP 91
            +PA +Y  FT +G VA++   Y+  +     LH  +P    + E YDERF GP++ +S +D+  P
Sbjct:  218 VPAQRYAVFTHKGSVAQLGETYELIYSKWLPLHGLEPVKGYDFERYDERFIGPENVRSELDIYIP 282          
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Match: A0A841TXL1_9BACL (GyrI-like domain-containing protein n=1 Tax=Cohnella xylanilytica TaxID=557555 RepID=A0A841TXL1_9BACL)

HSP 1 Score: 51.2 bits (121), Expect = 2.020e-5
Identity = 29/88 (32.95%), Postives = 40/88 (45.45%), Query Frame = 0
Query:    5 YGACVEVDSLEREYSTAMMARYLPAAKYLAFTVEGPVAEIAPAYDRTWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFPA 92
            Y AC EVD  E      M A+ LPAA Y  F+ +G +A +   +   +E          + +     YDER+ GP D  S +DL  P 
Sbjct:  200 YTACAEVDREESPVPAGMAAKRLPAADYAVFSHKGTLARLNDTFQYIYEEWLPRSGRIRTDAPEFARYDERYLGPADENSVLDLFIPV 287          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125683.5186.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 15
Match NameE-valueIdentityDescription
UPI001AB05A185.470e-933.33AraC family transcriptional regulator n=1 Tax=Pseu... [more]
A0A5R9G371_9BACL1.360e-837.78MerR family transcriptional regulator n=2 Tax=Paen... [more]
A0A6N7AW91_9FIRM3.370e-839.08AraC family transcriptional regulator n=1 Tax=Firm... [more]
A0A0P9DNQ4_9BACL2.490e-733.33AraC_E_bind domain-containing protein (Fragment) n... [more]
A0A069Q416_PSEAI7.860e-732.32C-di-GMP-binding multidrug transporter transcripti... [more]
UPI00138A00C21.120e-631.03GyrI-like domain-containing protein n=1 Tax=Chengk... [more]
UPI001CF9BFBE1.480e-632.18GyrI-like domain-containing protein n=1 Tax=Bacill... [more]
A0A2R3ISZ0_PSEAI2.050e-632.32MerR family transcriptional regulator n=5 Tax=Pseu... [more]
A0A7X3GJQ4_9BACL1.990e-535.38MerR family transcriptional regulator n=1 Tax=Paen... [more]
A0A841TXL1_9BACL2.020e-532.95GyrI-like domain-containing protein n=1 Tax=Cohnel... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029441Integron-associated effector binding proteinPFAMPF14526Cass2coord: 5..91
e-value: 3.6E-7
score: 30.5
IPR011256Regulatory factor, effector binding domain superfamilyGENE3D3.20.80.10coord: 2..92
e-value: 3.1E-9
score: 39.0
IPR011256Regulatory factor, effector binding domain superfamilySUPERFAMILY55136Probable bacterial effector-binding domaincoord: 3..91

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125683contigM-pyrifera_M_contig125683:219..500 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125683.5186.1mRNA_M-pyrifera_M_contig125683.5186.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125683 219..512 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125683.5186.1 ID=prot_M-pyrifera_M_contig125683.5186.1|Name=mRNA_M-pyrifera_M_contig125683.5186.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=94bp
MRWYYGACVEVDSLEREYSTAMMARYLPAAKYLAFTVEGPVAEIAPAYDR
TWELVAALHEGKPSCSVNLELYDERFTGPDDPQSRMDLLFPAP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029441Cass2
IPR011256Reg_factor_effector_dom_sf