prot_M-pyrifera_M_contig12557.5171.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12557.5171.1
Unique Nameprot_M-pyrifera_M_contig12557.5171.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length561
Homology
BLAST of mRNA_M-pyrifera_M_contig12557.5171.1 vs. uniprot
Match: A0A6H5KC01_9PHAE (SUZ domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC01_9PHAE)

HSP 1 Score: 162 bits (411), Expect = 9.210e-39
Identity = 227/448 (50.67%), Postives = 248/448 (55.36%), Query Frame = 0
Query:    1 GFGSGRGRPIPGGGXXXXXXXXXXXXXGERGGRV---GGLQQGPDGNNADRSDLXXXXXXXXXXXXXXXXXXXXXXXXXXPPVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHPQHPMMAAP--GPHGQA-HAMMAMPAAMQG-QLRGQMPGQPGVLVVQQPQQXXXXXXXXXXXXXXXXXXXXXXXXXGPAAYGAPVPGHPIYAP-GFIDPAQAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQIAYLHPQQQAVAGVLPAHQQGQQPQAQVXXXXXXXXXAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQAGLLQTPHMQTGVAVAGGYMTAQEYYGAHQ--QAIFY-QDPNMPGMAMGYGVQHAQI 437
            GFGSGRG+P+PG  XXXXXXX      GERG R     G  +GP    A                     XXXXX     P VNAGEWKGQRGMQRNRMAEKSDPDFVRNYD+YRPSFAPYRQLADPGG       XXXXXXXXXXX            QQHP H MM+A     HGQA HAMMA+PA MQG QLRGQMPGQ     +                 XXXXXXXXXXX   P+ YGA VPGH +YA  G++DPAQA XXXXXXXXXXXXXX     XXX       XXXXXXXXX     XXXXXX         Q       AH+ GQQ Q                                           XXXXXXXQ GLLQTP + T +A+  GYMTAQ++YGA Q  QAI+Y QDP+M G+AMGY VQ   +
Sbjct:  520 GFGSGRGKPVPGXXXXXXXXXAAAGREGERGVREEGGAGAAEGPVSXGA---------------------XXXXXRGSRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDHYRPSFAPYRQLADPGGGGGGGRGXXXXXXXXXXXQQPQPSPRLL--QQHP-HAMMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQMEAQAM-----------------XXXXXXXXXXXGGAPSVYGAAVPGHAMYAAQGYVDPAQAAXXXXXXXXXXXXXXAPGVSXXXGSTMRGQXXXXXXXXXQPRQHXXXXXXXXXXXXXXXQPXXXXPAAHR-GQQQQP------------------------------------------XXXXXXXQTGLLQTPQVPTSLAMTSGYMTAQDFYGAQQPQQAIYYPQDPSMQGVAMGYTVQQPHL 883          
BLAST of mRNA_M-pyrifera_M_contig12557.5171.1 vs. uniprot
Match: D8LM72_ECTSI (R3H domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM72_ECTSI)

HSP 1 Score: 137 bits (345), Expect = 2.140e-30
Identity = 144/200 (72.00%), Postives = 149/200 (74.50%), Query Frame = 0
Query:    1 GFGSGRGRPIPGGGXXXXXXXXXXXXXGERGGRVGGLQQ-GPDGNNADRSDLXXXXXXXXXXXXXXXXXXXXXXXXXXPPVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXQQHPQHPMMAAP--GPHGQA-HAMMAMPAAMQG-QLRGQMPGQ 195
            GFGSGRG+P+PGGGXXXXX           GGR GGLQQ G DG +       XXXXXX      XXXXXXXXXXX  P VNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGG     XXXXXXXXXXXXXXXXXXXXXXXXX       MM+A     HGQA HAMMA+PA MQG QLRGQMPGQ
Sbjct:  629 GFGSGRGKPVPGGGXXXXX-----------GGRAGGLQQQGSDGPDRGDYGRGXXXXXXGPGGRMXXXXXXXXXXXRRPAVNAGEWKGQRGMQRNRMAEKSDPDFVRNYDNYRPSFAPYRQLADPGGRGGRGXXXXXXXXXXXXXXXXXXXXXXXXXXXXA---MMSAAVQHAHGQAAHAMMAIPAGMQGHQLRGQMPGQ 814          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12557.5171.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A6H5KC01_9PHAE9.210e-3950.67SUZ domain-containing protein n=1 Tax=Ectocarpus s... [more]
D8LM72_ECTSI2.140e-3072.00R3H domain-containing protein n=1 Tax=Ectocarpus s... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableCOILSCoilCoilcoord: 271..306
NoneNo IPR availableCOILSCoilCoilcoord: 346..366

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12557contigM-pyrifera_M_contig12557:934..6498 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12557.5171.1mRNA_M-pyrifera_M_contig12557.5171.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12557 934..6498 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12557.5171.1 ID=prot_M-pyrifera_M_contig12557.5171.1|Name=mRNA_M-pyrifera_M_contig12557.5171.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=561bp
GFGSGRGRPIPGGGRGSNGGGGGGGGAGERGGRVGGLQQGPDGNNADRSD
LGGGGGGRGRGGERAGGRTGGGRGSRRPPVNAGEWKGQRGMQRNRMAEKS
DPDFVRNYDNYRPSFAPYRQLADPGGGGGGGGYGGGGGGHGQQPQPSPRL
LHQHQHQQHPQHPMMAAPGPHGQAHAMMAMPAAMQGQLRGQMPGQPGVLV
VQQPQQQQPQPWQQQQMEAQAMAAAAAAAGGGPAAYGAPVPGHPIYAPGF
IDPAQAQAQAQAQAQAQAQAQAQAQAQAQAQAQQRQQQQRQQLQLQQQQQ
QQQQQRQIAYLHPQQQAVAGVLPAHQQGQQPQAQVQQTQTHQVQAQQQAQ
QQAQAQQQAHSQQQAQAQAQHPQQHQQPQQPPQAGLLQTPHMQTGVAVAG
GYMTAQEYYGAHQQAIFYQDPNMPGMAMGYGVQHAQIPQQQQQQQQAYIL
PVQQQQPQQQPPPPPQQQQQQQQQQHHPYQHHVFPVGAMQQPPMPPQQQQ
QQHRPQHQRHHSNNHQHQQSGAGGGGGGGGGRHSGAGGGGGGGGRTVPNR
GYQSDFPPLG*
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