prot_M-pyrifera_M_contig12556.5169.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12556.5169.1
Unique Nameprot_M-pyrifera_M_contig12556.5169.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length398
Homology
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: D7FNP1_ECTSI (Similar to WD repeat domain 49 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FNP1_ECTSI)

HSP 1 Score: 164 bits (414), Expect = 1.470e-40
Identity = 102/231 (44.16%), Postives = 130/231 (56.28%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTG--------KGKEVSGIAYCKDN-RDSEHDRAEYVATCSWDKHVRIFDI-GNQSDGQ--LAFQQLDNNGN---------SVRTPSRIFPRD----HRLRYGGTHXXXXXXXXGA----------------QSPGEGHSADILAIAHCGPRQV 398
            +VSGDAMGNVHVWL+ETG L   RF  AHG+SK+SCM FD+SERRLLTGA+DG VK+WNF+NGKEL+    G                +  EVSG+ YC+D+ + S+++  +YVATCSWDK VR+F +  NQ D +   A QQ   N +         +    SR+FP +    HR   G           G                 Q  G+GHSADILAIA+CG +QV
Sbjct:  195 IVSGDAMGNVHVWLVETGLLAF-RFGKAHGTSKISCMAFDASERRLLTGANDGTVKLWNFNNGKELRLLLPGGNGXXXXXXXXXXXXXERNEVSGVVYCRDDGKGSDNEVLDYVATCSWDKQVRVFAMESNQEDRRNLAALQQQQQNRHRPLDGGETANATVASRVFPGEGPPLHRHHQGDASGRKGGNSVGGSSRSDGEDEGGGNEDTQDRGQGHSADILAIAYCGRQQV 424          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A6H5LB52_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LB52_9PHAE)

HSP 1 Score: 160 bits (405), Expect = 2.160e-39
Identity = 106/231 (45.89%), Postives = 135/231 (58.44%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTG--------KGKEVSGIAYCK-DNRDSEHDRAEYVATCSWDKHVRIFDI-GNQSDGQ--LAFQQLDNNGN---------SVRTPSRIFPRD----HRLRYGGT----------------HXXXXXXXXGAQSPGEGHSADILAIAHCGPRQV 398
            +VSGDAMGNVHVWL+ETG L   RF  AHG+SK+SCM FD+SERRLLTGA+DG VK+WNF++GKEL+    G                +  EVSG+ YC+ D + S+++  +YVATCSWDK VR+F +  +Q D +   A QQ   N +         +    SR+FP +    HR   GG                  XXXXXX    Q  G+GHSADILAIA+CG +QV
Sbjct:  124 IVSGDAMGNVHVWLVETGLLAF-RFGKAHGTSKISCMAFDASERRLLTGANDGTVKLWNFNSGKELRLLLPGGNGXXXXXXXXXXXXXERNEVSGVVYCREDGKGSDNEVLDYVATCSWDKQVRVFAMESSQEDSRNLAALQQQQQNRHRPLEGGETANATVASRVFPGEGPPLHRHHQGGAGRRKGGNSVXXXXXXXXXXXXXXDEDTQDRGQGHSADILAIAYCGRQQV 353          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A3N0XVP3_ANAGA (WD repeat-containing protein 49 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0XVP3_ANAGA)

HSP 1 Score: 78.6 bits (192), Expect = 6.670e-12
Identity = 59/190 (31.05%), Postives = 84/190 (44.21%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGPRQV 398
            VVS      V VW +ETG      F GAHG S ++CM FDSS RRL+TG  DG +KMWNF+NG+ ++            GK  E+    Y K +R+      E+V +  WD+ + I+ + ++ + Q            ++ P   +  D R                      GH  DIL IA C P  +
Sbjct:  924 VVSCSEGSVVKVWDVETGAQMF-EFGGAHGESAITCMVFDSSGRRLVTGGRDGCLKMWNFNNGQCVKILKR-------DGKCAEICDCLYLKLHRN------EFVISVGWDRRIDIY-LASKEETQ-----------KIQGPKPYWQDDVR---------------------NGHIEDILCIAQCTPHHL 1066          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: W5LW61_LEPOC (WD40 repeat domain 95 n=1 Tax=Lepisosteus oculatus TaxID=7918 RepID=W5LW61_LEPOC)

HSP 1 Score: 76.6 bits (187), Expect = 1.710e-11
Identity = 58/187 (31.02%), Postives = 78/187 (41.71%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGP 395
            VVS      V VW  +TG      F  AHG S ++CM FD S RRL+TG  DG +K+WNF+NG  L+            GK  EV    Y K NR +      YV    WD+ + ++           FQ  +++ + ++ P   +  D R                      GH  DIL IA C P
Sbjct:  144 VVSCTEGSVVKVWDFDTGGQVF-EFGDAHGHSAITCMTFDISGRRLVTGGRDGCLKIWNFNNGHCLKILKK-------EGKSDEVCDCTYVKVNRSN------YVMAVGWDRRIDMY-----------FQDSNDDVHHIQNPQPYWQDDLR---------------------SGHKEDILCIAQCPP 284          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: UPI001560D195 (WD repeat-containing protein 64-like n=3 Tax=Acipenseroidei TaxID=186622 RepID=UPI001560D195)

HSP 1 Score: 75.5 bits (184), Expect = 6.190e-11
Identity = 60/187 (32.09%), Postives = 78/187 (41.71%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGP 395
            VVS      V VW  ETG+     F GAHG S ++CM FD S RRL+TG  DG +K+WN++NG  L+            GK  EV    Y   NR++      YV    WD+ + I+      D   AF  + N       P   +  D R                      GH+ DIL +A C P
Sbjct:  600 VVSCTEGSVVKVWDYETGRQVF-EFCGAHGDSSITCMTFDMSGRRLVTGGRDGCLKIWNYNNGHCLRTLKK-------EGKSNEVCDCIYVAMNRNT------YVMAVGWDRKIDIY-----FDSIDAFHHIQN-------PQPHWQDDLR---------------------RGHTEDILCVAQCPP 739          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: V9KQE0_CALMI (WD repeat-containing protein 49-like protein (Fragment) n=1 Tax=Callorhinchus milii TaxID=7868 RepID=V9KQE0_CALMI)

HSP 1 Score: 74.7 bits (182), Expect = 6.780e-11
Identity = 57/188 (30.32%), Postives = 81/188 (43.09%), Query Frame = 0
Query:  208 IVVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGP 395
            +VVS      V VW ++TG L    F+ AH  S +SCM FD S RRL+TG  DG +K+WN++NG+ L+            GK  E+S  AY       E  + +YV    WD+ + I+          +F  L    N ++ P   +  D +                      GH  DIL +A C P
Sbjct:    1 LVVSCSEGSKVKVWDLDTGSLMF-EFSEAHKDSAISCMTFDDSGRRLITGGRDGCLKIWNYNNGQCLRTLKK-------VGKCAEISDCAYV------EIHKRKYVIAVGWDRRINIY--------YDSFADL----NHIQRPHTHWEDDLK---------------------HGHKDDILCVAQCPP 141          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: UPI0020143E36 (LOW QUALITY PROTEIN: WD repeat-containing protein on Y chromosome n=1 Tax=Megalobrama amblycephala TaxID=75352 RepID=UPI0020143E36)

HSP 1 Score: 75.1 bits (183), Expect = 8.300e-11
Identity = 57/190 (30.00%), Postives = 83/190 (43.68%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGPRQV 398
            VVS      V VW +ETG      F  AHG S ++CM FDSS RRL+TG  DG +KMWNF+NG+ ++            GK  E+    Y K +R++      +V +  WD+ + I+ + ++ + Q            ++ P   +  D R                      GH  DIL IA C P  +
Sbjct:  645 VVSCSEGSVVKVWDVETGAQMF-EFGDAHGESAITCMAFDSSGRRLVTGGRDGCLKMWNFNNGQCVKILKR-------DGKCAEICDCLYLKLHRNA------FVISVGWDRKIDIY-LASKEETQ-----------KIQGPKPYWQDDVR---------------------NGHKEDILCIAQCTPHHL 787          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A3N0Y030_ANAGA (WD repeat-containing protein 49 n=1 Tax=Anabarilius grahami TaxID=495550 RepID=A0A3N0Y030_ANAGA)

HSP 1 Score: 74.3 bits (181), Expect = 1.330e-10
Identity = 55/190 (28.95%), Postives = 78/190 (41.05%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGPRQV 398
            VVS      V VW +ETG      F GAHG S ++CM FDSS RRL+TG  DG +KMWNF+NG+ ++            GK  ++    Y K +R +      +V +  WD+ + ++            +         + P   +  D R                      GH  DIL IA C P  +
Sbjct:  407 VVSCSQGSVVKVWDVETGAQIF-EFGGAHGKSAITCMAFDSSGRRLVTGGIDGCLKMWNFNNGQCVKILKK-------DGKCDQICDCLYLKLHRKA------FVISVGWDRRIDVY------------EDFKEETQMTQRPKPSWQDDER---------------------NGHRDDILCIAQCPPHHL 549          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: A0A2C9JDI7_BIOGL (Uncharacterized protein n=2 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9JDI7_BIOGL)

HSP 1 Score: 74.3 bits (181), Expect = 1.470e-10
Identity = 52/179 (29.05%), Postives = 81/179 (45.25%), Query Frame = 0
Query:  218 VHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIF-DIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGP 395
            V +W  ETG L    +  AHG   ++CM FD+++RRL+TG  DG++K+WN++NG  L+     AK         E+  + Y + N++       YV    WDK + I+ D  N ++ Q            V+ P+  +  D +                      GH  D+L+IAHC P
Sbjct:  630 VKLWDFETGSLIF-EYGEAHGEEAITCMTFDNTKRRLITGGRDGSLKIWNYNNGHCLRVLKKKAKKNNAVHT-DEICDVTYIEMNKN------RYVIAVGWDKRINIYYDTVNDTNIQY-----------VQHPTPYWLDDLK---------------------NGHKEDVLSIAHCLP 768          
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Match: H3AGN1_LATCH (WD40 repeat domain 95 n=1 Tax=Latimeria chalumnae TaxID=7897 RepID=H3AGN1_LATCH)

HSP 1 Score: 73.9 bits (180), Expect = 1.560e-10
Identity = 54/187 (28.88%), Postives = 83/187 (44.39%), Query Frame = 0
Query:  209 VVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSSERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCKDNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTPSRIFPRDHRLRYGGTHXXXXXXXXGAQSPGEGHSADILAIAHCGP 395
            V+S      V VW  ETG+     F+GAHG+S ++C+ FD S RRL+TG  DG +K+WN++NG+ L+      K G       E+   AY + N++      +Y+    WD+ + IF              L ++ + ++ P   +  D +                      GH  DIL IA C P
Sbjct:  287 VISCSEGSAVKVWDFETGRQVF-EFSGAHGNSAITCITFDDSGRRLVTGGRDGCLKIWNYNNGRCLRTL---KKEGNCD----EICDCAYVEVNKN------KYIMAVGWDRKINIF------------SDLVDDLHHIQKPLPYWQDDLK---------------------HGHKEDILCIAQCAP 426          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12556.5169.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FNP1_ECTSI1.470e-4044.16Similar to WD repeat domain 49 n=1 Tax=Ectocarpus ... [more]
A0A6H5LB52_9PHAE2.160e-3945.89Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A3N0XVP3_ANAGA6.670e-1231.05WD repeat-containing protein 49 n=1 Tax=Anabariliu... [more]
W5LW61_LEPOC1.710e-1131.02WD40 repeat domain 95 n=1 Tax=Lepisosteus oculatus... [more]
UPI001560D1956.190e-1132.09WD repeat-containing protein 64-like n=3 Tax=Acipe... [more]
V9KQE0_CALMI6.780e-1130.32WD repeat-containing protein 49-like protein (Frag... [more]
UPI0020143E368.300e-1130.00LOW QUALITY PROTEIN: WD repeat-containing protein ... [more]
A0A3N0Y030_ANAGA1.330e-1028.95WD repeat-containing protein 49 n=1 Tax=Anabariliu... [more]
A0A2C9JDI7_BIOGL1.470e-1029.05Uncharacterized protein n=2 Tax=Biomphalaria glabr... [more]
H3AGN1_LATCH1.560e-1028.88WD40 repeat domain 95 n=1 Tax=Latimeria chalumnae ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001680WD40 repeatSMARTSM00320WD40_4coord: 227..267
e-value: 0.0059
score: 25.8
coord: 279..326
e-value: 0.097
score: 21.8
IPR001680WD40 repeatPFAMPF00400WD40coord: 236..267
e-value: 0.0066
score: 17.3
coord: 309..326
e-value: 0.13
score: 13.2
IPR001680WD40 repeatPROSITEPS50082WD_REPEATS_2coord: 239..276
score: 10.542
IPR015943WD40/YVTN repeat-like-containing domain superfamilyGENE3D2.130.10.10coord: 164..360
e-value: 7.8E-21
score: 76.7
NoneNo IPR availablePANTHERPTHR44324FAMILY NOT NAMEDcoord: 177..395
IPR019775WD40 repeat, conserved sitePROSITEPS00678WD_REPEATS_1coord: 254..268
IPR017986WD40-repeat-containing domainPROSITEPS50294WD_REPEATS_REGIONcoord: 205..276
score: 10.39
IPR036322WD40-repeat-containing domain superfamilySUPERFAMILY50978WD40 repeat-likecoord: 204..333

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12556contigM-pyrifera_M_contig12556:1242..8073 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12556.5169.1mRNA_M-pyrifera_M_contig12556.5169.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12556 1242..8073 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12556.5169.1 ID=prot_M-pyrifera_M_contig12556.5169.1|Name=mRNA_M-pyrifera_M_contig12556.5169.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=398bp
PGGHPRGGRPERELLNAGTRRRRVPSFVRDRPQRSANLWRGRQDPLRRPR
QAGSAPNVRRSRGPRRLRLRLLQAPSFRRFSWHGSRGDVLEPVHHGHPGE
GGGARVEREALPCRRRERPSHYRLRGEDRALLGQQHLLLYSGVQGHPDAP
ARRHGDSRSLGRRQELTDIGRQQARSVEKRRGHTVHHADTRGARHRSAVQ
HQLSSGMIVVSGDAMGNVHVWLIETGQLTCCRFAGAHGSSKMSCMCFDSS
ERRLLTGASDGAVKMWNFSNGKELQFFGSGAKSGGLTGKGKEVSGIAYCK
DNRDSEHDRAEYVATCSWDKHVRIFDIGNQSDGQLAFQQLDNNGNSVRTP
SRIFPRDHRLRYGGTHGGSHGGGRGAQSPGEGHSADILAIAHCGPRQV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001680WD40_repeat
IPR015943WD40/YVTN_repeat-like_dom_sf
IPR019775WD40_repeat_CS
IPR017986WD40_repeat_dom
IPR036322WD40_repeat_dom_sf