prot_M-pyrifera_M_contig125496.5148.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig125496.5148.1
Unique Nameprot_M-pyrifera_M_contig125496.5148.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length119
Homology
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BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: A0A2U3YPE2_LEPWE (Nuclear pore complex protein Nup93 n=1 Tax=Leptonychotes weddellii TaxID=9713 RepID=A0A2U3YPE2_LEPWE)

HSP 1 Score: 75.5 bits (184), Expect = 1.710e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  353 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 470
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BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: A0A4U1EW82_MONMO (Nuclear pore complex protein Nup93 (Fragment) n=1 Tax=Monodon monoceros TaxID=40151 RepID=A0A4U1EW82_MONMO)

HSP 1 Score: 75.5 bits (184), Expect = 1.710e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  360 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 477
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: A0A7F8K7M1_DELLE (Nuclear pore complex protein Nup93 n=3 Tax=Eutheria TaxID=9347 RepID=A0A7F8K7M1_DELLE)

HSP 1 Score: 75.5 bits (184), Expect = 1.710e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  373 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 490
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: A0A5N4DU68_CAMDR (Nuclear pore complex protein Nup93 n=1 Tax=Camelus dromedarius TaxID=9838 RepID=A0A5N4DU68_CAMDR)

HSP 1 Score: 75.5 bits (184), Expect = 1.720e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  391 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 508
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: UPI0009448F1D (nuclear pore complex protein Nup93 isoform X6 n=1 Tax=Rhinolophus sinicus TaxID=89399 RepID=UPI0009448F1D)

HSP 1 Score: 75.5 bits (184), Expect = 1.730e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  410 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 527
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: UPI00141ACD8B (nuclear pore complex protein Nup93 isoform X3 n=1 Tax=Trachypithecus francoisi TaxID=54180 RepID=UPI00141ACD8B)

HSP 1 Score: 75.5 bits (184), Expect = 1.740e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  545 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 662
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: A0A337SCP4_FELCA (Nuclear pore complex protein Nup93 n=22 Tax=Boreoeutheria TaxID=1437010 RepID=A0A337SCP4_FELCA)

HSP 1 Score: 75.5 bits (184), Expect = 1.740e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  514 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 631
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: NUP93_HUMAN (Nuclear pore complex protein Nup93 n=731 Tax=Tetrapoda TaxID=32523 RepID=NUP93_HUMAN)

HSP 1 Score: 75.5 bits (184), Expect = 1.750e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  535 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 652
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: NUP93_MOUSE (Nuclear pore complex protein Nup93 n=138 Tax=Amniota TaxID=32524 RepID=NUP93_MOUSE)

HSP 1 Score: 75.5 bits (184), Expect = 1.750e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  535 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 652
[Close]
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Match: F7DKW7_HORSE (Nuclear pore complex protein Nup93 n=6 Tax=Boreoeutheria TaxID=1437010 RepID=F7DKW7_HORSE)

HSP 1 Score: 75.5 bits (184), Expect = 1.750e-13
Identity = 47/123 (38.21%), Postives = 75/123 (60.98%), Query Frame = 0 
Query:    1 YVRVFANSNPAEAVHYLFLLRDERERE------RSICELVLFTREYDLILGTALEDGSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAHAKVLLVLNNQMRLVMTQ 117
            Y R F +++P EA+ Y + LRDE++ +      R + ELV+ +RE+D+ILG    DGSR+ GV+D+  +D  P I ++VA  +  N G + +AA+LY LA   +   KVL ++N  +  V+ Q
Sbjct:  535 YTRKFESTDPREALQYFYFLRDEKDSQGENMFLRCVSELVIESREFDMILGKLENDGSRKPGVIDKFTSDTKP-IINKVAS-VAENKGLFEEAAKLYDLAKNAD---KVLELMNKLLSPVVPQ 652
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig125496.5148.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2U3YPE2_LEPWE1.710e-1338.21Nuclear pore complex protein Nup93 n=1 Tax=Leptony... [more]
A0A4U1EW82_MONMO1.710e-1338.21Nuclear pore complex protein Nup93 (Fragment) n=1 ... [more]
A0A7F8K7M1_DELLE1.710e-1338.21Nuclear pore complex protein Nup93 n=3 Tax=Eutheri... [more]
A0A5N4DU68_CAMDR1.720e-1338.21Nuclear pore complex protein Nup93 n=1 Tax=Camelus... [more]
UPI0009448F1D1.730e-1338.21nuclear pore complex protein Nup93 isoform X6 n=1 ... [more]
UPI00141ACD8B1.740e-1338.21nuclear pore complex protein Nup93 isoform X3 n=1 ... [more]
A0A337SCP4_FELCA1.740e-1338.21Nuclear pore complex protein Nup93 n=22 Tax=Boreoe... [more]
NUP93_HUMAN1.750e-1338.21Nuclear pore complex protein Nup93 n=731 Tax=Tetra... [more]
NUP93_MOUSE1.750e-1338.21Nuclear pore complex protein Nup93 n=138 Tax=Amnio... [more]
F7DKW7_HORSE1.750e-1338.21Nuclear pore complex protein Nup93 n=6 Tax=Boreoeu... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007231Nucleoporin interacting component Nup93/Nic96PFAMPF04097Nic96coord: 1..115
e-value: 1.7E-18
score: 66.5
IPR007231Nucleoporin interacting component Nup93/Nic96PANTHERPTHR11225NUCLEAR PORE COMPLEX PROTEIN NUP93 NUCLEOPORIN NUP93 DEAD EYE PROTEINcoord: 1..117
NoneNo IPR availablePANTHERPTHR11225:SF4NUCLEAR PORE COMPLEX PROTEIN NUP93coord: 1..117

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig125496contigM-pyrifera_M_contig125496:2..358 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig125496.5148.1mRNA_M-pyrifera_M_contig125496.5148.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig125496 2..358 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig125496.5148.1 ID=prot_M-pyrifera_M_contig125496.5148.1|Name=mRNA_M-pyrifera_M_contig125496.5148.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=119bp
YVRVFANSNPAEAVHYLFLLRDERERERSICELVLFTREYDLILGTALED
GSRQNGVVDELMADEAPGIAHQVADRLVHNGGRYADAARLYFLAGTVEAH
AKVLLVLNNQMRLVMTQQS
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007231Nucleoporin_int_Nup93/Nic96