prot_M-pyrifera_M_contig12505.5080.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12505.5080.1
Unique Nameprot_M-pyrifera_M_contig12505.5080.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length137
Homology
BLAST of mRNA_M-pyrifera_M_contig12505.5080.1 vs. uniprot
Match: D7G735_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G735_ECTSI)

HSP 1 Score: 179 bits (453), Expect = 9.580e-55
Identity = 85/137 (62.04%), Postives = 108/137 (78.83%), Query Frame = 0
Query:    1 PLSSCVRFLLGFQVFTWNVACVGSIVVVTVFWTSLYDGGALTSTDINAHALIAVIMVLDQMLVATKFERKQMRAAFAYGATYITWNILWFLVGTESEKVIYSTMDWGENLEGAILFAVVIIFVLIPVYGLIHYGVYR 137
            PLSS  R LLGFQVF+WNVACVGS+V+VTVFW +L+D   LTSTD+NAH LIA IM +DQ+LVATKFERKQM A+F++   Y+ +NI++FL   E E+VIY  MDWGE++  +  FA V+ FVL+P+ GLIHY V+R
Sbjct:   23 PLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPIMAIDQLLVATKFERKQMLASFSFSIVYVAFNIIFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVAFVLVPLGGLIHYCVFR 159          
BLAST of mRNA_M-pyrifera_M_contig12505.5080.1 vs. uniprot
Match: A0A6H5JMZ5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMZ5_9PHAE)

HSP 1 Score: 177 bits (449), Expect = 5.450e-53
Identity = 84/137 (61.31%), Postives = 107/137 (78.10%), Query Frame = 0
Query:    1 PLSSCVRFLLGFQVFTWNVACVGSIVVVTVFWTSLYDGGALTSTDINAHALIAVIMVLDQMLVATKFERKQMRAAFAYGATYITWNILWFLVGTESEKVIYSTMDWGENLEGAILFAVVIIFVLIPVYGLIHYGVYR 137
            PLSS  R LLGFQVF+WNVACVGS+V+VTVFW +L+D   LTSTD+NAH LIA +M +DQ+LVATKFERKQM A+F +   Y+ +NI++FL   E E+VIY  MDWGE++  +  FA V+ FVL+P+ GLIHY V+R
Sbjct:  112 PLSSNRRALLGFQVFSWNVACVGSLVIVTVFWVALFDNTPLTSTDVNAHILIAPVMAIDQLLVATKFERKQMLASFLFSIVYVAFNIVFFLTAPEDERVIYGQMDWGESVGNSAAFAAVVTFVLVPLGGLIHYCVFR 248          
BLAST of mRNA_M-pyrifera_M_contig12505.5080.1 vs. uniprot
Match: D7G736_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G736_ECTSI)

HSP 1 Score: 122 bits (306), Expect = 2.930e-31
Identity = 60/137 (43.80%), Postives = 88/137 (64.23%), Query Frame = 0
Query:    1 PLSSCVRFLLGFQVFTWNVACVGSIVVVTVFWTSLYDGGALTSTDINAHALIAVIMVLDQMLVATKFERKQMRAAFAYGATYITWNILWFLVGTESEKVIYSTMDWGENLEGAILFAVVIIFVLIPVYGLIHYGVYR 137
            PL   V   L  Q+FTWNVAC+GS+ V  ++W+SLY G  +TS D+NAH LIA +MV DQMLVAT F  + M  A  +  TY+ +++LW+ +    +++IY  +DW  +   A  ++V  IFVLIP   ++HY ++R
Sbjct:  124 PLEQAV---LAIQLFTWNVACLGSLFVAIIYWSSLYTGTPITSVDMNAHTLIAFVMVADQMLVATPFRIRDMWKAEVFAITYLVYSLLWYFL---EQELIYVILDWDRHFWEAFSYSVAGIFVLIPATSVLHYYIFR 254          
BLAST of mRNA_M-pyrifera_M_contig12505.5080.1 vs. uniprot
Match: A0A6H5JSI9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JSI9_9PHAE)

HSP 1 Score: 117 bits (294), Expect = 9.840e-30
Identity = 53/137 (38.69%), Postives = 90/137 (65.69%), Query Frame = 0
Query:    1 PLSSCVRFLLGFQVFTWNVACVGSIVVVTVFWTSLYDGGALTSTDINAHALIAVIMVLDQMLVATKFERKQMRAAFAYGATYITWNILWFLVGTESEKVIYSTMDWGENLEGAILFAVVIIFVLIPVYGLIHYGVYR 137
            P+ + +R L   Q+  W+ AC+ S++VV++FW +LYDG  LT+ D  AH  +A IM+LDQ LVA +F+ + +    A+G  YI +N+ W+ +  + +++IY  +DW +N  GA ++A   I V  P++GL+H+G++R
Sbjct:  118 PVPAALRHL---QLALWSTACIVSLIVVSIFWGALYDGDKLTTVDEQAHVFVACIMLLDQFLVADEFKLRYVLFPQAFGVIYIFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHFGIFR 251          
BLAST of mRNA_M-pyrifera_M_contig12505.5080.1 vs. uniprot
Match: D7G734_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G734_ECTSI)

HSP 1 Score: 84.3 bits (207), Expect = 5.390e-18
Identity = 45/137 (32.85%), Postives = 78/137 (56.93%), Query Frame = 0
Query:    1 PLSSCVRFLLGFQVFTWNVACVGSIVVVTVFWTSLYDGGALTSTDINAHALIAVIMVLDQMLVATKFERKQMRAAFAYGATYITWNILWFLVGTESEKVIYSTMDWGENLEGAILFAVVIIFVLIPVYGLIHYGVYR 137
            P+ + +R L   Q+  W+ AC+GS++VVT+FW      GAL               +LDQ LVA +F+ + +    A+G  Y+ +N+ W+ +  + +++IY  +DW +N  GA ++A   I V  P++GL+H G++R
Sbjct:   14 PVPAVLRHL---QLVLWSTACIGSLIVVTIFW------GAL---------------LLDQFLVADEFKLRYILFPQAFGVIYLFFNVGWYYLAPDDDRLIYIILDWEDNTLGACIYAFGAILVGAPLFGLVHLGLFR 126          
BLAST of mRNA_M-pyrifera_M_contig12505.5080.1 vs. uniprot
Match: D7G733_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G733_ECTSI)

HSP 1 Score: 73.6 bits (179), Expect = 1.110e-12
Identity = 37/137 (27.01%), Postives = 74/137 (54.01%), Query Frame = 0
Query:    1 PLSSCVRFLLGFQVFTWNVACVGSIVVVTVFWTSLYDGGALTSTDINAHALIAVIMVLDQMLVATKFERKQMRAAFAYGATYITWNILWFLVGTESEKVIYSTMDWGENLEGAILFAVVIIFVLIPVYGLIHYGVYR 137
            P+    R+L   Q  +W + C+ S+VV++VFW ++Y+     ++   +  ++A++M+LDQ L+AT+ + K       +   YI +N++++      ++V +   DW E    A L+  +I+   +P +  +H  VYR
Sbjct:  128 PVPCYFRWL---QHISWVLTCISSMVVLSVFWMTIYESDVPVTSVYVSSTILALLMLLDQFLIATEMKFKYAWLGLYFFVVYIFYNVIYYYEHNVEDRVTFEVFDWDERPGRACLWVFLILAFGVPGFTALHVFVYR 261          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12505.5080.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7G735_ECTSI9.580e-5562.04Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5JMZ5_9PHAE5.450e-5361.31Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G736_ECTSI2.930e-3143.80Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A6H5JSI9_9PHAE9.840e-3038.69Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
D7G734_ECTSI5.390e-1832.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
D7G733_ECTSI1.110e-1227.01Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR039860Protein rolling stonePANTHERPTHR12242:SF1LD06593P-RELATEDcoord: 10..137
NoneNo IPR availablePANTHERPTHR12242UNCHARACTERIZEDcoord: 10..137
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..11
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 12..34
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 132..137
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..92
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 35..45
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 64..74
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 93..111
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 112..131
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 46..63
NoneNo IPR availableTMHMMTMhelixcoord: 10..32
NoneNo IPR availableTMHMMTMhelixcoord: 74..93
NoneNo IPR availableTMHMMTMhelixcoord: 113..135

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12505contigM-pyrifera_M_contig12505:206..1614 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12505.5080.1mRNA_M-pyrifera_M_contig12505.5080.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12505 206..1614 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12505.5080.1 ID=prot_M-pyrifera_M_contig12505.5080.1|Name=mRNA_M-pyrifera_M_contig12505.5080.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=137bp
PLSSCVRFLLGFQVFTWNVACVGSIVVVTVFWTSLYDGGALTSTDINAHA
LIAVIMVLDQMLVATKFERKQMRAAFAYGATYITWNILWFLVGTESEKVI
YSTMDWGENLEGAILFAVVIIFVLIPVYGLIHYGVYR
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR039860Rost