prot_M-pyrifera_M_contig12499.5070.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12499.5070.1
Unique Nameprot_M-pyrifera_M_contig12499.5070.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length57
Homology
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BLAST of mRNA_M-pyrifera_M_contig12499.5070.1 vs. uniprot
Match: D7FUH1_ECTSI (Putative methyltransferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FUH1_ECTSI)

HSP 1 Score: 70.5 bits (171), Expect = 8.820e-13
Identity = 34/57 (59.65%), Postives = 41/57 (71.93%), Query Frame = 0 
Query:    1 PDSAALLNNLGSALLTLGDVEEGLPLLQKAFELDPTRHDPLVNVGAHLQEEGDLDGA 57
            P +   LNNLG ALL LG  +EGL +L+K+FELDP   D LVN+G H QE+GDLD A
Sbjct:  400 PKNCVALNNLGVALLALGQQDEGLSMLEKSFELDPFEPDVLVNLGIHWQEDGDLDRA 456
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12499.5070.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FUH1_ECTSI8.820e-1359.65Putative methyltransferase n=1 Tax=Ectocarpus sili... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013105Tetratricopeptide repeat 2PFAMPF07719TPR_2coord: 4..36
e-value: 1.2E-5
score: 25.0
IPR011990Tetratricopeptide-like helical domain superfamilyGENE3D1.25.40.10coord: 1..57
e-value: 7.1E-11
score: 43.9
IPR011990Tetratricopeptide-like helical domain superfamilySUPERFAMILY48452TPR-likecoord: 1..57
IPR013026Tetratricopeptide repeat-containing domainPROSITEPS50293TPR_REGIONcoord: 1..57
score: 16.166
IPR019734Tetratricopeptide repeatPROSITEPS50005TPRcoord: 4..37
score: 10.679

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12499contigM-pyrifera_M_contig12499:1009..1179 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12499.5070.1mRNA_M-pyrifera_M_contig12499.5070.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12499 1009..1179 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12499.5070.1 ID=prot_M-pyrifera_M_contig12499.5070.1|Name=mRNA_M-pyrifera_M_contig12499.5070.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=57bp
PDSAALLNNLGSALLTLGDVEEGLPLLQKAFELDPTRHDPLVNVGAHLQE
EGDLDGA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013105TPR_2
IPR011990TPR-like_helical_dom_sf
IPR013026TPR-contain_dom
IPR019734TPR_repeat