prot_M-pyrifera_M_contig124850.5050.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124850.5050.1
Unique Nameprot_M-pyrifera_M_contig124850.5050.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length162
Homology
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A6A3L579_9STRA (Eukaryotic translation initiation factor 3 subunit C n=22 Tax=Peronosporaceae TaxID=4777 RepID=A0A6A3L579_9STRA)

HSP 1 Score: 182 bits (463), Expect = 1.870e-50
Identity = 90/164 (54.88%), Postives = 121/164 (73.78%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +Q+    ADIPTQIL NR M +LG+CAF  GL +EAH CLS++C+GSR KELL QG  + RYG+R  E E+L +R  VPYHMHINLD+LET HL++AML+EVPN+    L  R+R +S+A RK +++ +R  +  P EN R+ VVAA+KLL QG W+K+
Sbjct:  598 LLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLVWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNSRLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWRKS 761          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A0N7L6P5_PLAHL (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0N7L6P5_PLAHL)

HSP 1 Score: 182 bits (462), Expect = 2.700e-50
Identity = 90/164 (54.88%), Postives = 121/164 (73.78%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +Q+    ADIPTQIL NR M +LG+CAF  GL +EAH CLS++C+GSR KELL QG  + RYG+R  E E+L +R  VPYHMHINLD+LET HL++AML+EVPN+    L  R+R +S+A RK +++ +R  +  P EN R+ VVAA+KLL QG W+K+
Sbjct:  620 LLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNARLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWRKS 783          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A662Y4U0_9STRA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y4U0_9STRA)

HSP 1 Score: 182 bits (462), Expect = 2.750e-50
Identity = 90/164 (54.88%), Postives = 121/164 (73.78%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +Q+    ADIPTQIL NR M +LG+CAF  GL +EAH CLS++C+GSR KELL QG  + RYG+R  E E+L +R  VPYHMHINLD+LET HL++AML+EVPN+    L  R+R +S+A RK +++ +R  +  P EN R+ VVAA+KLL QG W+K+
Sbjct:  629 LLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNSRLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWRKS 792          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A421GR70_9STRA (Eukaryotic translation initiation factor 3 subunit C n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GR70_9STRA)

HSP 1 Score: 181 bits (459), Expect = 8.370e-50
Identity = 89/164 (54.27%), Postives = 121/164 (73.78%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +Q+    ADIPTQIL NR M +LG+CAF  GL +EAH CLS++C+GSR KELL QG  + RYG+R  E E+L +R  VPYHMHINLD+LET HL++AML+EVPN+    L  R+R +S+A RK +++ +R  +  P EN R+ VV+A+KLL QG W+K+
Sbjct: 1147 LLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNSRLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVSAAKLLAQGSWRKS 1310          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: H3GBM0_PHYRM (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GBM0_PHYRM)

HSP 1 Score: 176 bits (447), Expect = 1.160e-48
Identity = 86/152 (56.58%), Postives = 114/152 (75.00%), Query Frame = 0
Query:   13 ADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            ADIPTQIL NR M +LG+CAF  GL +EAH CLS++C+GSR KELL QG  + RYG+R  E E+L +R  VPYHMHINLD++ET HL++AML+EVPN+    L  R+R +S+A RK +++ +R  +  P EN R+ VVAA+KLL QG W+K+
Sbjct:  410 ADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLMETCHLVSAMLLEVPNMVNSRLSDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWRKS 561          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: UPI001CB8B885 (eukaryotic translation initiation factor 3 subunit C n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8B885)

HSP 1 Score: 176 bits (446), Expect = 3.700e-48
Identity = 86/164 (52.44%), Postives = 124/164 (75.61%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTT-NRYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +Q++ Q  DI TQIL NR+M +LG+CAF  GL  E H CLS+L SG R+KELL QG + NRY ++  E E+L +R  +PYHMHINL++LE VHLI AML+EVPN+AA + ++RR+ IS+ LR+++D +DRQ +  P EN R+ V+AA++ L +GD++K+
Sbjct:  532 LLMSHLQDSVQQMDISTQILFNRSMAQLGLCAFRAGLVVEGHGCLSELYSGGRVKELLAQGVSQNRYHEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMAANSHDARRKVISKTLRRHLDSIDRQTFTGPPENVRDHVMAATRALSKGDFQKS 695          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A484DRR6_BRELC (Eukaryotic translation initiation factor 3 subunit C n=1 Tax=Bremia lactucae TaxID=4779 RepID=A0A484DRR6_BRELC)

HSP 1 Score: 174 bits (441), Expect = 1.940e-47
Identity = 87/164 (53.05%), Postives = 119/164 (72.56%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDR-YETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +Q+    ADIPTQIL NR M +LG+CAF  GL +EAH CLS++C+GSR KELL QG  + RYG+R  E E+L +R  VPYHMHINLD+LET HL++AML+EVPN+    +  R+R +S+A RK +++ +R  +  P EN R+ VVAA K L QG W+++
Sbjct:  620 LLMSHIQDNITDADIPTQILFNRMMAQLGLCAFRCGLIWEAHACLSEICTGSRTKELLAQGLQSFRYGERDLEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNPNVTDRKRIVSKAFRKLLEFHERLVFEGPPENPRDHVVAAVKHLAQGSWRQS 783          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A3N6SMF8_BRACR (PCI domain-containing protein (Fragment) n=1 Tax=Brassica cretica TaxID=69181 RepID=A0A3N6SMF8_BRACR)

HSP 1 Score: 169 bits (428), Expect = 3.310e-47
Identity = 82/163 (50.31%), Postives = 121/163 (74.23%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTNRYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +Q+  Q  DI TQIL NR+M +LG+CAF  G+  EAH+CLS+LCSG R +ELL QG +    ++  E E+L +R  +PYHMHINL++LE VHLI AML+EVPN++A + ++RR+ IS+ +R+ ++  DRQ + AP EN R+ V+AA++ L +GD++KA
Sbjct:  193 LLMSHLQDNVQHMDISTQILFNRSMAQLGLCAFRVGMFTEAHSCLSELCSGQRARELLAQGVSQSRKEKTPEQERLERRRQMPYHMHINLELLEAVHLICAMLLEVPNMSANSHDARRKVISKNIRRLLEISDRQAFTAPPENVRDHVMAATRALTKGDFEKA 355          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A2K1KPT1_PHYPA (Eukaryotic translation initiation factor 3 subunit C n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KPT1_PHYPA)

HSP 1 Score: 173 bits (439), Expect = 3.550e-47
Identity = 85/164 (51.83%), Postives = 122/164 (74.39%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTT-NRYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKKA 162
            +LM+ +QE+  + DI TQIL NRAM +LG+CAF + L  EAHNCLS+L +G R+KELL QG + +RY ++  E EKL +R  +P+HMHINL++LE VHLITAML+EVPN+A+   + +R+ IS+  R+ +D  ++Q +  P EN R+ V+AA++ L +GDWKKA
Sbjct:  540 LLMSHLQESVMNMDISTQILFNRAMAQLGLCAFRESLVTEAHNCLSELYAGGRVKELLAQGVSQSRYHEKNPEQEKLERRRQMPFHMHINLELLEAVHLITAMLLEVPNMASSVHDMKRKMISKPFRRLLDINEKQMFTGPPENVRDHVMAATRALSKGDWKKA 703          
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Match: A0A8K1C5H8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1C5H8_PYTOL)

HSP 1 Score: 173 bits (439), Expect = 3.640e-47
Identity = 88/163 (53.99%), Postives = 117/163 (71.78%), Query Frame = 0
Query:    1 MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCSGSRMKELLGQGTTN-RYGDRY-ETEKLSKRMHVPYHMHINLDVLETVHLITAMLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAASKLLLQGDWKK 161
            +LM+ +Q+    ADIPTQIL NR M +LG+ AF  GL +EAH CLS++C+GSR KELL QG  + RY +R  E E+L +R  VPYHMHINLD+LET HL++AML+EVPN+       R+R +S+A RK +++ +R  +  P EN R+ VVAA+KLL QG WKK
Sbjct:  616 LLMSHIQDNITDADIPTQILFNRMMAQLGLSAFRAGLIWEAHACLSEICTGSRTKELLAQGMQSFRYQERDPEQERLERRRQVPYHMHINLDLLETCHLVSAMLLEVPNMVNTRASDRKRMVSKAFRKLLEFHERLVFEGPPENPRDHVVAAAKLLAQGSWKK 778          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124850.5050.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A3L579_9STRA1.870e-5054.88Eukaryotic translation initiation factor 3 subunit... [more]
A0A0N7L6P5_PLAHL2.700e-5054.88Eukaryotic translation initiation factor 3 subunit... [more]
A0A662Y4U0_9STRA2.750e-5054.88Eukaryotic translation initiation factor 3 subunit... [more]
A0A421GR70_9STRA8.370e-5054.27Eukaryotic translation initiation factor 3 subunit... [more]
H3GBM0_PHYRM1.160e-4856.58Eukaryotic translation initiation factor 3 subunit... [more]
UPI001CB8B8853.700e-4852.44eukaryotic translation initiation factor 3 subunit... [more]
A0A484DRR6_BRELC1.940e-4753.05Eukaryotic translation initiation factor 3 subunit... [more]
A0A3N6SMF8_BRACR3.310e-4750.31PCI domain-containing protein (Fragment) n=1 Tax=B... [more]
A0A2K1KPT1_PHYPA3.550e-4751.83Eukaryotic translation initiation factor 3 subunit... [more]
A0A8K1C5H8_PYTOL3.640e-4753.99Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR008905Eukaryotic translation initiation factor 3 subunit C, N-terminal domainPFAMPF05470eIF-3c_Ncoord: 1..111
e-value: 2.1E-45
score: 155.1
IPR027516Eukaryotic translation initiation factor 3 subunit CPANTHERPTHR13937EUKARYOTIC TRANSLATION INITATION FACTOR 3, SUBUNIT 8 EIF3S8 -RELATEDcoord: 1..162
NoneNo IPR availablePANTHERPTHR13937:SF0EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT C-RELATEDcoord: 1..162

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124850contigM-pyrifera_M_contig124850:1..486 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124850.5050.1mRNA_M-pyrifera_M_contig124850.5050.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124850 1..516 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124850.5050.1 ID=prot_M-pyrifera_M_contig124850.5050.1|Name=mRNA_M-pyrifera_M_contig124850.5050.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=162bp
MLMTRMQEAAQSADIPTQILHNRAMGRLGICAFDKGLTYEAHNCLSDLCS
GSRMKELLGQGTTNRYGDRYETEKLSKRMHVPYHMHINLDVLETVHLITA
MLIEVPNIAAGALESRRRTISRALRKYIDYVDRQFYAAPAENTREMVVAA
SKLLLQGDWKKA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR008905EIF3C_N_dom
IPR027516EIF3C