prot_M-pyrifera_M_contig124842.5048.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124842.5048.1
Unique Nameprot_M-pyrifera_M_contig124842.5048.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length72
Homology
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: A0A6A4KLK2_9ERIC (eIF3_N domain-containing protein (Fragment) n=1 Tax=Rhododendron williamsianum TaxID=262921 RepID=A0A6A4KLK2_9ERIC)

HSP 1 Score: 80.9 bits (198), Expect = 1.260e-18
Identity = 35/71 (49.30%), Postives = 54/71 (76.06%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKGM 71
            MA YDLTP +A  LDRHLV P+L+FL    ++  +D+LKA+++LL+ TNMVD+  ++HK L+ ++E P+G+
Sbjct:    1 MANYDLTPRIAPNLDRHLVFPILEFLQERQLYADEDILKAKIELLNNTNMVDYAMDIHKSLYHTEEVPQGV 71          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: UPI00098E2A61 (eukaryotic translation initiation factor 3 subunit E-like n=1 Tax=Asparagus officinalis TaxID=4686 RepID=UPI00098E2A61)

HSP 1 Score: 81.6 bits (200), Expect = 6.520e-18
Identity = 38/71 (53.52%), Postives = 52/71 (73.24%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKGM 71
            MA YDLT  +A  LDRHLV PLL+FL     +N  D+LKA+++LLSKTNMVD+  ++HK L+ ++E P+ M
Sbjct:    1 MANYDLTSRIAPHLDRHLVFPLLEFLQERGFYNDDDILKAKIELLSKTNMVDYAMDIHKNLYHTEEVPQEM 71          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: A0A4W3JD29_CALMI (eIF3_N domain-containing protein n=1 Tax=Callorhinchus milii TaxID=7868 RepID=A0A4W3JD29_CALMI)

HSP 1 Score: 79.0 bits (193), Expect = 9.010e-18
Identity = 39/70 (55.71%), Postives = 51/70 (72.86%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKG 70
            MA YDLT  +A FLDRHLV PLL+FLS   I+N K+LL+ ++ LLS TNMVDF  +++K L+   E P+G
Sbjct:    1 MADYDLTMKIANFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLYSDKEIPQG 70          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: UPI000C1D66B9 (eukaryotic translation initiation factor 3 subunit E-like n=2 Tax=Olea europaea var. sylvestris TaxID=158386 RepID=UPI000C1D66B9)

HSP 1 Score: 79.7 bits (195), Expect = 1.750e-17
Identity = 36/71 (50.70%), Postives = 53/71 (74.65%), Query Frame = 0
Query:    2 AQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKGML 72
            A+YDLTP +A  LDRHLV PLL+FL    ++  +D+LKA+++LL+ TNMVD+  ++HK L+ SD+ P  M+
Sbjct:    3 AKYDLTPRIAPQLDRHLVFPLLEFLQERGLYAEEDILKAKIELLNNTNMVDYAMDIHKSLYHSDDVPNEMV 73          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: A0A218W4P1_PUNGR (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Punica granatum TaxID=22663 RepID=A0A218W4P1_PUNGR)

HSP 1 Score: 84.3 bits (207), Expect = 2.150e-17
Identity = 38/72 (52.78%), Postives = 56/72 (77.78%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKGML 72
            MAQYDLTP +A  LDRHLV PLL+FL    ++  +++LKA+++LLSKTNMVD+  ++HK L+ ++E P+ M+
Sbjct:    1 MAQYDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEEILKAKIELLSKTNMVDYAMDIHKSLYHTEEVPQDMV 72          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: A0A674DC66_SALTR (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Salmo trutta TaxID=8032 RepID=A0A674DC66_SALTR)

HSP 1 Score: 77.4 bits (189), Expect = 3.300e-17
Identity = 39/68 (57.35%), Postives = 49/68 (72.06%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAP 68
            MA+YDLT  +A FLDRHLV PLL+FLS   I+N K+LL  ++ LLS+TNMVDF  ++HK L    E P
Sbjct:    1 MAEYDLTTKIAHFLDRHLVFPLLEFLSVKEIYNEKELLHGKLDLLSETNMVDFAMDVHKNLFPEKEIP 68          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: A0A6A2X8H6_HIBSY (Cyclin family isoform 1 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A2X8H6_HIBSY)

HSP 1 Score: 80.5 bits (197), Expect = 3.990e-17
Identity = 36/72 (50.00%), Postives = 54/72 (75.00%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKGML 72
            MA YDLTP +A  LDRHLV PLL+FL    ++  + +LKA+++LL+KTNMVD+  ++HK L+ +D+ P+ M+
Sbjct:    1 MAAYDLTPRIAPNLDRHLVFPLLEFLQERQLYPDEQILKAKIELLNKTNMVDYAMDIHKNLYHTDDVPQDMI 72          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: A0A199UQA3_ANACO (Eukaryotic translation initiation factor 3 subunit E n=1 Tax=Ananas comosus TaxID=4615 RepID=A0A199UQA3_ANACO)

HSP 1 Score: 79.7 bits (195), Expect = 4.600e-17
Identity = 35/70 (50.00%), Postives = 53/70 (75.71%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKG 70
            MA YDLT  +A  LDRHLV PLL+FL    +++  ++LKA+++LLS+TNMVD+  ++HK L+ +D+ P+G
Sbjct:    1 MANYDLTSRIAPHLDRHLVFPLLEFLQERQLYDDDEILKAKIELLSQTNMVDYAMDIHKSLYHTDDVPQG 70          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: A0A672GV44_SALFA (eIF3_N domain-containing protein n=2 Tax=Euteleostomi TaxID=117571 RepID=A0A672GV44_SALFA)

HSP 1 Score: 77.0 bits (188), Expect = 4.940e-17
Identity = 40/75 (53.33%), Postives = 54/75 (72.00%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAP---KGML 72
            MA+YDLT  +A FLDRHLV PLL+FLS   I+N K+LL+ ++ LLS TNMVDF  +++K L+   E P   +G+L
Sbjct:    1 MAEYDLTTKIAHFLDRHLVFPLLEFLSVKEIYNEKELLQGKLDLLSDTNMVDFAMDVYKNLYSDKEIPHCNRGLL 75          
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Match: B9T350_RICCO (Eukaryotic translation initiation factor 3 subunit, putative n=1 Tax=Ricinus communis TaxID=3988 RepID=B9T350_RICCO)

HSP 1 Score: 77.0 bits (188), Expect = 5.340e-17
Identity = 34/72 (47.22%), Postives = 52/72 (72.22%), Query Frame = 0
Query:    1 MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNMVDFHEELHKLLHESDEAPKGML 72
            MA YDLTP +A  LDRHLV PLL+FL    ++    + K++++LLSKTNMVD+  ++HK L+ +++ P+ M+
Sbjct:    1 MATYDLTPRIAPNLDRHLVFPLLEFLQERQLYPEDQIFKSKIELLSKTNMVDYAMDIHKSLYHTEDVPQDMI 72          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124842.5048.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6A4KLK2_9ERIC1.260e-1849.30eIF3_N domain-containing protein (Fragment) n=1 Ta... [more]
UPI00098E2A616.520e-1853.52eukaryotic translation initiation factor 3 subunit... [more]
A0A4W3JD29_CALMI9.010e-1855.71eIF3_N domain-containing protein n=1 Tax=Callorhin... [more]
UPI000C1D66B91.750e-1750.70eukaryotic translation initiation factor 3 subunit... [more]
A0A218W4P1_PUNGR2.150e-1752.78Eukaryotic translation initiation factor 3 subunit... [more]
A0A674DC66_SALTR3.300e-1757.35Eukaryotic translation initiation factor 3 subunit... [more]
A0A6A2X8H6_HIBSY3.990e-1750.00Cyclin family isoform 1 n=1 Tax=Hibiscus syriacus ... [more]
A0A199UQA3_ANACO4.600e-1750.00Eukaryotic translation initiation factor 3 subunit... [more]
A0A672GV44_SALFA4.940e-1753.33eIF3_N domain-containing protein n=2 Tax=Euteleost... [more]
B9T350_RICCO5.340e-1747.22Eukaryotic translation initiation factor 3 subunit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalSMARTSM01186eIF3_N_2coord: 5..72
e-value: 2.8E-5
score: 23.7
IPR019010Eukaryotic translation initiation factor 3 subunit E, N-terminalPFAMPF09440eIF3_Ncoord: 5..71
e-value: 1.7E-22
score: 80.3
IPR016650Eukaryotic translation initiation factor 3 subunit EPANTHERPTHR10317EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT Ecoord: 1..71

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124842contigM-pyrifera_M_contig124842:51..325 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124842.5048.1mRNA_M-pyrifera_M_contig124842.5048.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124842 51..325 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124842.5048.1 ID=prot_M-pyrifera_M_contig124842.5048.1|Name=mRNA_M-pyrifera_M_contig124842.5048.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=72bp
MAQYDLTPMVAKFLDRHLVLPLLDFLSNAPIFNPKDLLKARVQLLSKTNM
VDFHEELHKLLHESDEAPKGML
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR019010eIF3e_N
IPR016650eIF3e