prot_M-pyrifera_M_contig124840.5047.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124840.5047.1
Unique Nameprot_M-pyrifera_M_contig124840.5047.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length102
Homology
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124840.5047.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 0
Match NameE-valueIdentityDescription
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableGENE3D3.30.710.10coord: 1..102
e-value: 2.4E-11
score: 45.9
IPR036296SKP1-like, dimerisation domain superfamilySUPERFAMILY81382Skp1 dimerisation domain-likecoord: 29..102

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124840contigM-pyrifera_M_contig124840:127..432 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124840.5047.1mRNA_M-pyrifera_M_contig124840.5047.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124840 127..432 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124840.5047.1 ID=prot_M-pyrifera_M_contig124840.5047.1|Name=mRNA_M-pyrifera_M_contig124840.5047.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
PALTSEIVAALVRFMEYHAEHDDPALRSSFTEEFLGSITGDDKRLLSLLV
AADIFVVPELVLAVQQHVHQQLKAAASPKEARKKLGINSDFTPAELERIE
KE
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036296SKP1-like_dim_sf