prot_M-pyrifera_M_contig12477.5032.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12477.5032.1
Unique Nameprot_M-pyrifera_M_contig12477.5032.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length127
Homology
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: D7G7B6_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G7B6_ECTSI)

HSP 1 Score: 102 bits (255), Expect = 6.280e-26
Identity = 97/111 (87.39%), Postives = 102/111 (91.89%), Query Frame = 0
Query:   20 MLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMF-----GGGD 125
            MLLVLGGNA+P+KEDVTTALAAVG++ DEARLDQLIADMAGKDI ALIEAGKGKLASFG  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX+DMGGGMDMF     GGGD
Sbjct:    1 MLLVLGGNASPTKEDVTTALAAVGIECDEARLDQLIADMAGKDIAALIEAGKGKLASFG--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIDMGGGMDMFXXXXEGGGD 109          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A835ZFT3_9STRA (60s acidic ribosomal protein-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZFT3_9STRA)

HSP 1 Score: 102 bits (254), Expect = 1.060e-25
Identity = 93/115 (80.87%), Postives = 105/115 (91.30%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGDDG 127
            MRH+A YM+LVLGGNA+PS EDVT AL++VG++ADEARL QLIA+M GKD+N ++EAGK KLAS G XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGG+ G
Sbjct:    1 MRHLAVYMMLVLGGNASPSAEDVTKALSSVGIEADEARLSQLIAEMEGKDLNEVMEAGKKKLASLG-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGEGG 114          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A4D9D2N6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9D2N6_9STRA)

HSP 1 Score: 86.7 bits (213), Expect = 1.730e-19
Identity = 85/115 (73.91%), Postives = 95/115 (82.61%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--VDMGGGMDMFGGGD 125
            MRH+ATY+LL LGGN  PS  DVTTAL++VGV+ADE RL  L+ D+ GKD+  LIE G   LA+FGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX   D+GG MDMFGGGD
Sbjct:    1 MRHLATYLLLKLGGNENPSASDVTTALSSVGVEADEGRLSTLLKDLEGKDVETLIEEGSKLLATFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADLGGAMDMFGGGD 115          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A7S1BJ38_9STRA (Hypothetical protein n=1 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BJ38_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.080e-19
Identity = 81/111 (72.97%), Postives = 92/111 (82.88%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGG 123
            M+H+A Y+L VLGGN +PS  DVTTAL+AVGV+AD  RL  L+ D+ GKD+N L+ +GKG LA FG   XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMFGG
Sbjct:    1 MKHLAAYLLCVLGGNESPSVSDVTTALSAVGVEADSERLATLVKDLEGKDLNELLTSGKGLLAKFG---XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMGGGMDMFGG 108          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A7S2RFX2_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2RFX2_9STRA)

HSP 1 Score: 84.7 bits (208), Expect = 9.580e-19
Identity = 78/111 (70.27%), Postives = 95/111 (85.59%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGG 123
            M+H+A Y+LLVLGGNA+PS +DVT +LA+VGV+ D+  LD+LI+++ GKD+N ++E+GK  LA FG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX DMGGGMDMFGG
Sbjct:    1 MKHVAAYLLLVLGGNASPSADDVTKSLASVGVEVDKESLDKLISELDGKDVNEIMESGKDMLAKFG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXADMGGGMDMFGG 107          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A448ZRL0_9STRA (Uncharacterized protein n=1 Tax=Pseudo-nitzschia multistriata TaxID=183589 RepID=A0A448ZRL0_9STRA)

HSP 1 Score: 84.0 bits (206), Expect = 1.770e-18
Identity = 43/66 (65.15%), Postives = 55/66 (83.33%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFG 78
            M+ +ATY++L +GGNA+PSKEDVT AL+AVGV+AD A LD+L AD+ GK+I  LIEAGK +LA FG
Sbjct:    1 MKELATYLMLQIGGNASPSKEDVTGALSAVGVEADSASLDKLFADIEGKEIAELIEAGKDQLAKFG 66          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A7S0C3X8_9STRA (Hypothetical protein n=1 Tax=Proboscia inermis TaxID=420281 RepID=A0A7S0C3X8_9STRA)

HSP 1 Score: 82.0 bits (201), Expect = 1.090e-17
Identity = 79/111 (71.17%), Postives = 93/111 (83.78%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGG 123
            M+HMA Y+LLVLGGNA+PS +DV  AL  VGV+ ++ RL+ LI+++ GKD++ LI  G GKLA  GGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX  +DMGGGMDMFGG
Sbjct:    1 MKHMAAYLLLVLGGNASPSADDVKKALGVVGVEVEDERLNALISELEGKDLSELIATGTGKLAQLGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--MDMGGGMDMFGG 109          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: B7GA61_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GA61_PHATC)

HSP 1 Score: 81.6 bits (200), Expect = 1.500e-17
Identity = 75/110 (68.18%), Postives = 95/110 (86.36%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFG 122
            M+H+A Y+LL LGGNA+P+K+D+T AL+AVGV+ D A LD+++AD+ G+D+ AL+E+G   LA+FG    XXXXXXXXXXXXXXXXXXXXXXXXXXXXX+D+GGGMDMFG
Sbjct:    1 MKHLAAYLLLQLGGNASPTKDDITQALSAVGVEVDGADLDRMLADLEGQDLEALLESGNALLATFG----XXXXXXXXXXXXXXXXXXXXXXXXXXXXXMDLGGGMDMFG 106          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A7S3Q302_9STRA (Hypothetical protein n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3Q302_9STRA)

HSP 1 Score: 81.3 bits (199), Expect = 2.020e-17
Identity = 42/66 (63.64%), Postives = 52/66 (78.79%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFG 78
            M+H+A Y+LLVLGGN +PS  DVTTALAAVGV+AD A LD+ +A+M GKDI+  + AGK  LA FG
Sbjct:    1 MKHVAAYLLLVLGGNESPSAADVTTALAAVGVEADSASLDKFLAEMEGKDIDETLAAGKELLAKFG 66          
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Match: A0A2D4BM79_PYTIN (Ribosomal protein putative n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BM79_PYTIN)

HSP 1 Score: 80.5 bits (197), Expect = 2.070e-17
Identity = 48/114 (42.11%), Postives = 63/114 (55.26%), Query Frame = 0
Query:   13 MRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEARLDQLIADMAGKDINALIEAGKGKLASFGGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVDMGGGMDMFGGGDD 126
            MR++A Y+L +LGGNA PS  DVT  L++VGV+ D  RL+Q+I+++ GKD+N +I AG  KLA FG                                  D+GGGMDMFGGG D
Sbjct:    3 MRYIAAYLLAILGGNAAPSAADVTAILSSVGVEVDAERLNQVISELEGKDVNEIIAAGSKKLAKFG-----------------------------EEEEADLGGGMDMFGGGSD 87          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12477.5032.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G7B6_ECTSI6.280e-2687.39Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835ZFT3_9STRA1.060e-2580.8760s acidic ribosomal protein-domain-containing pro... [more]
A0A4D9D2N6_9STRA1.730e-1973.91Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A7S1BJ38_9STRA9.080e-1972.97Hypothetical protein n=1 Tax=Corethron hystrix Tax... [more]
A0A7S2RFX2_9STRA9.580e-1970.27Hypothetical protein n=1 Tax=Eucampia antarctica T... [more]
A0A448ZRL0_9STRA1.770e-1865.15Uncharacterized protein n=1 Tax=Pseudo-nitzschia m... [more]
A0A7S0C3X8_9STRA1.090e-1771.17Hypothetical protein n=1 Tax=Proboscia inermis Tax... [more]
B7GA61_PHATC1.500e-1768.18Predicted protein n=2 Tax=Phaeodactylum tricornutu... [more]
A0A7S3Q302_9STRA2.020e-1763.64Hypothetical protein n=1 Tax=Chaetoceros debilis T... [more]
A0A2D4BM79_PYTIN2.070e-1742.11Ribosomal protein putative n=1 Tax=Pythium insidio... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR038716Ribosomal protein P1/P2, N-terminal domainGENE3D1.10.10.1410coord: 12..72
e-value: 5.8E-20
score: 73.2
NoneNo IPR availablePFAMPF00428Ribosomal_60scoord: 30..118
e-value: 8.4E-17
score: 61.6
NoneNo IPR availablePANTHERPTHR21141:SF560S ACIDIC RIBOSOMAL PROTEIN P2coord: 13..121
NoneNo IPR availablePANTHERPTHR2114160S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBERcoord: 13..121
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..16
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 29..127
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 17..24
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 25..28
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..28
IPR027534Ribosomal protein L12 familyHAMAPMF_01478Ribosomal_L12_archcoord: 14..122
score: 12.983

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12477contigM-pyrifera_M_contig12477:702..4219 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12477.5032.1mRNA_M-pyrifera_M_contig12477.5032.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12477 702..4219 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12477.5032.1 ID=prot_M-pyrifera_M_contig12477.5032.1|Name=mRNA_M-pyrifera_M_contig12477.5032.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=127bp
SSCFRPSLNRFKMRHMATYMLLVLGGNATPSKEDVTTALAAVGVDADEAR
LDQLIADMAGKDINALIEAGKGKLASFGGGGGGGGGGGGGGDGGGDAPKA
EEKVEEEEEEEVDMGGGMDMFGGGDDG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR038716P1/P2_N_sf
IPR027534Ribosomal_L12