prot_M-pyrifera_M_contig124599.4999.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124599.4999.1
Unique Nameprot_M-pyrifera_M_contig124599.4999.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length109
Homology
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A6L7S1L3_9RHOB (Amino acid-binding protein n=4 Tax=unclassified Boseongicola TaxID=2634418 RepID=A0A6L7S1L3_9RHOB)

HSP 1 Score: 137 bits (346), Expect = 1.300e-37
Identity = 60/108 (55.56%), Postives = 79/108 (73.15%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F+  D+V+LEEP HD  KW +IQPTDDPDW AKS A V W  A  H+H+AK +E  +P+ AS+LAN+  TA+EV+AM+ A+  DGK P  YA+EW+A N D+V GWL
Sbjct:  207 VFALHDVVVLEEPPHDASKWMVIQPTDDPDWFAKSDAAVAWDSAYLHLHYAKELETSHPEVASMLANMALTADEVSAMTFALVIDGKEPLAYAEEWVAANEDKVLGWL 314          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A849F789_9RHOB (Amino acid-binding protein n=2 Tax=Rhodobacteraceae TaxID=31989 RepID=A0A849F789_9RHOB)

HSP 1 Score: 128 bits (321), Expect = 4.540e-34
Identity = 53/108 (49.07%), Postives = 75/108 (69.44%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F   DL +LEEPAHDP  W I+QPTDDPDWLAKS A   W+ A  H+H+AKS+E+++P+ A++ AN     + ++AM  A+  DG+   D+A EW+A N D++ GWL
Sbjct:  188 IFVTQDLHVLEEPAHDPATWTIVQPTDDPDWLAKSEASTAWNGATLHLHYAKSLEEDFPEVAALFANFQMDGDALSAMGKALAVDGQEAADFAAEWVAANEDKIIGWL 295          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A0B3RY87_9RHOB (Glycine betaine/proline ABC transporter, periplasmic substrate-binding protein n=2 Tax=Mameliella alba TaxID=561184 RepID=A0A0B3RY87_9RHOB)

HSP 1 Score: 127 bits (318), Expect = 1.680e-33
Identity = 55/108 (50.93%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F+  DL+MLEEPA+D   W ++QPTDDPDWLAKSS    W  A+ H+ F K++E E P+ A++L NI FTA+EV+AM+ AV  D + P+ YAK+W+A + D + GW 
Sbjct:  201 IFAVHDLIMLEEPAYDAANWTVVQPTDDPDWLAKSSVSSAWPTAQVHVGFRKALETENPEVAAMLRNITFTADEVSAMTQAVVIDKQDPETYAKDWVAAHQDAIVGWF 308          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A839U668_9HYPH (Glycine betaine/proline transport system substrate-binding protein n=3 Tax=Phyllobacterium TaxID=28100 RepID=A0A839U668_9HYPH)

HSP 1 Score: 126 bits (316), Expect = 4.350e-33
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F   D+V L+EPAHD  KW +I P DDPDWLAKS+APV W  A+FHI ++K++  + P+    L NI FT +E+  MS AVE D + P DYAK W+ ++ DRV  WL
Sbjct:  211 VFKLHDIVKLDEPAHDASKWHVILPADDPDWLAKSNAPVAWDAARFHIAYSKALATKSPEVTKFLENIDFTPDEITEMSYAVEVDRQPPADYAKAWVGKHADRVQKWL 318          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A2E8YGC0_9GAMM (Amino acid-binding protein n=1 Tax=Thiotrichales bacterium TaxID=2026796 RepID=A0A2E8YGC0_9GAMM)

HSP 1 Score: 125 bits (315), Expect = 5.090e-33
Identity = 57/108 (52.78%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            MF   DLV+LEEPAHDP KW +IQPTDDPDWLAKSSAPV WS    HIH+AK++ D+ PQAA IL N+  + ++V+ M   +  +  + +D A+++I +N D V+ WL
Sbjct:  207 MFGLHDLVVLEEPAHDPAKWNVIQPTDDPDWLAKSSAPVAWSDTYLHIHYAKALADKQPQAAQILENLKVSTDQVSDMVFEMTVNKVSGEDVARKFIEENGDLVDSWL 314          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A1H0PJG2_9HYPH (Glycine betaine/proline transport system substrate-binding protein n=5 Tax=Phyllobacterium TaxID=28100 RepID=A0A1H0PJG2_9HYPH)

HSP 1 Score: 125 bits (315), Expect = 6.120e-33
Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F   D+V L+EPA DP KW ++ P DDPDWLAKS+APV W KA FHI +AK++    P+    L +I FT  E+  MS AVE D +TP+DYA+ W+ +N DR+  W+
Sbjct:  211 VFKLHDIVKLDEPAFDPAKWHVVLPADDPDWLAKSNAPVAWDKAHFHIAYAKALATRKPEVTKFLESIDFTPEEITDMSYAVEVDRQTPEDYAEAWVEKNPDRIAKWV 318          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A0P1F4W0_9RHOB (Glycine betaine-binding periplasmic protein n=15 Tax=Ruegeria TaxID=97050 RepID=A0A0P1F4W0_9RHOB)

HSP 1 Score: 125 bits (314), Expect = 7.470e-33
Identity = 53/108 (49.07%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F+  D+ +LEEPA+D  KW ++QPTDDPDWL KS A V W  A  H+HFAKS+E+EYP+ A++L+N+    + V+AM+ A+  +G+ P  YA+EW+  N D V GW+
Sbjct:  207 VFALHDMQILEEPAYDAAKWNVLQPTDDPDWLEKSEAGVAWDLAYLHLHFAKSLEEEYPEVATMLSNMKLDTDTVSAMTFALVIEGQEPLAYAEEWVGANEDAVLGWM 314          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A521DR81_9RHOB (Glycine betaine/proline transport system substrate-binding protein n=4 Tax=Roseobacteraceae TaxID=2854170 RepID=A0A521DR81_9RHOB)

HSP 1 Score: 125 bits (314), Expect = 7.470e-33
Identity = 55/108 (50.93%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F   DL +LEEPA+D  KW ++QPTDDPDWL KS A V W  A  H+H+AKS+EDEYP+ A +L+N+      V+AM+ A+  DGK P  YA+EW+  N D V  W+
Sbjct:  207 VFELHDLQILEEPAYDAAKWNVLQPTDDPDWLEKSEAGVAWDLAYLHLHYAKSLEDEYPEVARLLSNMKLDTAAVSAMTYALVIDGKEPLAYAEEWVGANEDAVLNWM 314          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: A0A1M4YM64_9RHOB (Glycine betaine/proline transport system substrate-binding protein n=1 Tax=Ruegeria intermedia TaxID=996115 RepID=A0A1M4YM64_9RHOB)

HSP 1 Score: 124 bits (310), Expect = 2.930e-32
Identity = 52/108 (48.15%), Postives = 77/108 (71.30%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F   DL +L+EP +D  KWK++QPTDDP+WL KS A V W KA  H+H+AKS+E+++P+ A +LAN+    ++V+ M+ A+  D K PQ YA+EW+A + D V GW+
Sbjct:  207 VFQLHDLQVLDEPPYDAAKWKVLQPTDDPEWLEKSEAGVAWDKAYLHLHYAKSLENDFPEVARLLANMKLDTDQVSEMTYALVIDEKDPQAYAEEWVAAHEDAVLGWM 314          
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Match: UPI000CE1ACD8 (amino acid-binding protein n=1 Tax=Roseovarius nitratireducens TaxID=2044597 RepID=UPI000CE1ACD8)

HSP 1 Score: 123 bits (309), Expect = 4.120e-32
Identity = 50/108 (46.30%), Postives = 73/108 (67.59%), Query Frame = 0
Query:    1 MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHFAKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQNNDRVNGWL 108
            +F+  D+ +L+EP HDP KW ++QPTDDPDWLAKS     W KA  H+++A+++E  +P  A++L+N+ F    V  M+ A+  DGK P  YA+EW+A N D V GW+
Sbjct:  207 VFALHDMQVLQEPPHDPDKWNVLQPTDDPDWLAKSDVTTAWDKAYLHVYYARALESSHPNVAALLSNVKFDTQTVTDMTYALVIDGKEPLAYAEEWVAANEDAVLGWM 314          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124599.4999.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6L7S1L3_9RHOB1.300e-3755.56Amino acid-binding protein n=4 Tax=unclassified Bo... [more]
A0A849F789_9RHOB4.540e-3449.07Amino acid-binding protein n=2 Tax=Rhodobacteracea... [more]
A0A0B3RY87_9RHOB1.680e-3350.93Glycine betaine/proline ABC transporter, periplasm... [more]
A0A839U668_9HYPH4.350e-3350.93Glycine betaine/proline transport system substrate... [more]
A0A2E8YGC0_9GAMM5.090e-3352.78Amino acid-binding protein n=1 Tax=Thiotrichales b... [more]
A0A1H0PJG2_9HYPH6.120e-3350.00Glycine betaine/proline transport system substrate... [more]
A0A0P1F4W0_9RHOB7.470e-3349.07Glycine betaine-binding periplasmic protein n=15 T... [more]
A0A521DR81_9RHOB7.470e-3350.93Glycine betaine/proline transport system substrate... [more]
A0A1M4YM64_9RHOB2.930e-3248.15Glycine betaine/proline transport system substrate... [more]
UPI000CE1ACD84.120e-3246.30amino acid-binding protein n=1 Tax=Roseovarius nit... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR007210ABC-type glycine betaine transport system, substrate-binding domainPFAMPF04069OpuACcoord: 1..99
e-value: 1.0E-11
score: 45.0
NoneNo IPR availableGENE3D3.40.190.10coord: 3..108
e-value: 2.7E-15
score: 58.8
NoneNo IPR availableSUPERFAMILY53850Periplasmic binding protein-like IIcoord: 3..108

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124599contigM-pyrifera_M_contig124599:6..332 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124599.4999.1mRNA_M-pyrifera_M_contig124599.4999.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124599 6..332 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124599.4999.1 ID=prot_M-pyrifera_M_contig124599.4999.1|Name=mRNA_M-pyrifera_M_contig124599.4999.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=109bp
MFSQDDLVMLEEPAHDPGKWKIIQPTDDPDWLAKSSAPVGWSKAKFHIHF
AKSIEDEYPQAASILANIGFTANEVAAMSAAVENDGKTPQDYAKEWIAQN
NDRVNGWL*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR007210ABC_Gly_betaine_transp_sub-bd