prot_M-pyrifera_M_contig124468.4977.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124468.4977.1
Unique Nameprot_M-pyrifera_M_contig124468.4977.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length172
Homology
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A2E7KFZ5_9PLAN (PDZ domain-containing protein n=13 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KFZ5_9PLAN)

HSP 1 Score: 340 bits (872), Expect = 5.120e-117
Identity = 169/172 (98.26%), Postives = 171/172 (99.42%), Query Frame = 0
Query:    1 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 172
            TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLN LLAKA+PGQNVTLSV+QVGEKGAVSKVNVTLGWAERIN
Sbjct:   17 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNTLLAKAQPGQNVTLSVVQVGEKGAVSKVNVTLGWAERIN 188          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A355GC51_9PLAN (PDZ domain-containing protein n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A355GC51_9PLAN)

HSP 1 Score: 287 bits (735), Expect = 3.000e-96
Identity = 145/172 (84.30%), Postives = 156/172 (90.70%), Query Frame = 0
Query:    1 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 172
            TLFL+VNYESQAQE     AP +     + RQKYAALMS+AHKARLNQHYSKYYKATLGVV TDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPA+KAGLMKYDIILSFG HRLASVRQLN+LLAKA+PGQ+V LSVIQVGE+GAVS V+VTLGW+ERIN
Sbjct:   17 TLFLVVNYESQAQE-----APAAKQDGSTARQKYAALMSDAHKARLNQHYSKYYKATLGVVCTDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPAEKAGLMKYDIILSFGSHRLASVRQLNSLLAKAQPGQDVKLSVIQVGEQGAVSTVDVTLGWSERIN 183          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A517RD66_9PLAN (PDZ domain-containing protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A517RD66_9PLAN)

HSP 1 Score: 282 bits (722), Expect = 2.850e-94
Identity = 143/172 (83.14%), Postives = 153/172 (88.95%), Query Frame = 0
Query:    1 TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 172
            TLFL+VNYESQAQE + N    S       RQKYAALMSEAHKARLNQHYSKYYKATLG+V TDASGPLAAHLTNGAPDWWTGVGT+++GNPGYGVVIMHVAPGSPAD AGLMKYDIILSFGKHRLASVRQLNALLAKA+PGQ+V LSVIQVGE GAVS V+V LGW+ERIN
Sbjct:   17 TLFLVVNYESQAQEGSVNNKTTSTA-----RQKYAALMSEAHKARLNQHYSKYYKATLGIVGTDASGPLAAHLTNGAPDWWTGVGTDINGNPGYGVVIMHVAPGSPADNAGLMKYDIILSFGKHRLASVRQLNALLAKAQPGQDVKLSVIQVGENGAVSTVDVKLGWSERIN 183          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A517VZV6_9PLAN (PDZ domain (Also known as DHR or GLGF) n=2 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VZV6_9PLAN)

HSP 1 Score: 279 bits (714), Expect = 4.690e-93
Identity = 141/171 (82.46%), Postives = 150/171 (87.72%), Query Frame = 0
Query:    2 LFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHYSKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAERIN 172
            LFL+++YESQAQE AP     S       RQKYAALMSEAHKA LNQHYSKYYKATLG++AT ASGPLAAHLTNGAPDWWTGVGT+LDGNPGYGVVIMHVAPGSPAD+AGLMKYDIILSFGKHRLASVRQLNALL KA+PGQ V L VIQVGE+GAVS V VTLGWAERIN
Sbjct:   18 LFLVLSYESQAQEGAPQKKAASTA-----RQKYAALMSEAHKANLNQHYSKYYKATLGIIATAASGPLAAHLTNGAPDWWTGVGTDLDGNPGYGVVIMHVAPGSPADQAGLMKYDIILSFGKHRLASVRQLNALLEKAQPGQKVALKVIQVGEQGAVSDVEVTLGWAERIN 183          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A3M0YHL9_9GAMM (PDZ domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YHL9_9GAMM)

HSP 1 Score: 71.2 bits (173), Expect = 6.400e-12
Identity = 37/79 (46.84%), Postives = 51/79 (64.56%), Query Frame = 0
Query:   91 NPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAE 169
            +PG GV++  V P SPA KAGL  YDI+LSF   +L S RQL  L+ +++PGQ V L V++ G+   +  + VTLG  E
Sbjct:   42 SPGQGVLVAEVIPDSPAAKAGLKPYDILLSFDDQKLFSPRQLRELVQRSQPGQEVKLKVLRQGQ---IQTITVTLGEQE 117          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A1W9W0C4_9DELT (Uncharacterized protein n=1 Tax=Desulfobacteraceae bacterium 4572_87 TaxID=1972443 RepID=A0A1W9W0C4_9DELT)

HSP 1 Score: 65.5 bits (158), Expect = 2.440e-9
Identity = 31/67 (46.27%), Postives = 47/67 (70.15%), Query Frame = 0
Query:   95 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKV 161
            GV+I HVA GSPA  AGL   D+I  FG  R+  V+Q+ +L+ KA+PGQ VTL++++ G + +++ V
Sbjct:  120 GVIISHVAKGSPALTAGLRSGDVIRRFGATRILDVKQMQSLILKAQPGQKVTLTILRDGRQNSLNVV 186          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A831W430_9GAMM (PDZ domain-containing protein n=1 Tax=Sedimenticola thiotaurini TaxID=1543721 RepID=A0A831W430_9GAMM)

HSP 1 Score: 61.6 bits (148), Expect = 3.160e-8
Identity = 30/72 (41.67%), Postives = 46/72 (63.89%), Query Frame = 0
Query:   95 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLG 166
            GV++  VAPGSPAD+AG+  +DI+L FG  +L +  QL  L+   +PG  V++ +++    G V  V VT+G
Sbjct:   68 GVLVRQVAPGSPADRAGIRPFDILLGFGDQKLFAPEQLVKLVRSGKPGDKVSIELVR---SGRVMPVEVTIG 136          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A3M0YG40_9GAMM (PDZ domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YG40_9GAMM)

HSP 1 Score: 60.8 bits (146), Expect = 4.610e-8
Identity = 31/79 (39.24%), Postives = 48/79 (60.76%), Query Frame = 0
Query:   91 NPGYGVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAE 169
            +PG GV++  V P SPA KAGL  +D++L+F   ++ S RQL  L+    PG+ V L V++ G+   +  ++ TLG  E
Sbjct:   48 SPGQGVLVAEVIPASPAAKAGLKPFDVLLAFDGEKVFSPRQLQELVRGKRPGETVKLEVLRQGQ---IQTLSATLGEQE 123          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A7C1UD24_9GAMM (PDZ domain-containing protein n=1 Tax=Thiothrix sp. TaxID=1032 RepID=A0A7C1UD24_9GAMM)

HSP 1 Score: 60.5 bits (145), Expect = 1.120e-7
Identity = 32/72 (44.44%), Postives = 47/72 (65.28%), Query Frame = 0
Query:   95 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLG 166
            GV++  V  GSPA+K+GL ++DI+LSF   +L S +QL  L++ A+P   VTLS+I+ G K     + V LG
Sbjct:   74 GVMVESVVLGSPAEKSGLTRFDIVLSFNNQKLFSPQQLAQLVSAAKPDDEVTLSIIRAGVK---QDIKVKLG 142          
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Match: A0A2V8NEH0_9BACT (Uncharacterized protein n=1 Tax=Acidobacteria bacterium TaxID=1978231 RepID=A0A2V8NEH0_9BACT)

HSP 1 Score: 60.5 bits (145), Expect = 1.200e-7
Identity = 33/75 (44.00%), Postives = 45/75 (60.00%), Query Frame = 0
Query:   95 GVVIMHVAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVIQVGEKGAVSKVNVTLGWAE 169
            GV +  V+PGSPADKAGL K D+IL F    +   R+L  L+ ++ P Q V L++      G+  +VNVTLG  E
Sbjct:   80 GVGVNRVSPGSPADKAGLKKGDVILQFDNEPVTGTRKLFRLIGESAPEQTVRLTI---SRNGSEQQVNVTLGQRE 151          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124468.4977.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KFZ5_9PLAN5.120e-11798.26PDZ domain-containing protein n=13 Tax=Gimesia Tax... [more]
A0A355GC51_9PLAN3.000e-9684.30PDZ domain-containing protein n=9 Tax=Planctomycet... [more]
A0A517RD66_9PLAN2.850e-9483.14PDZ domain-containing protein n=2 Tax=Gimesia TaxI... [more]
A0A517VZV6_9PLAN4.690e-9382.46PDZ domain (Also known as DHR or GLGF) n=2 Tax=Gim... [more]
A0A3M0YHL9_9GAMM6.400e-1246.84PDZ domain-containing protein n=1 Tax=Gammaproteob... [more]
A0A1W9W0C4_9DELT2.440e-946.27Uncharacterized protein n=1 Tax=Desulfobacteraceae... [more]
A0A831W430_9GAMM3.160e-841.67PDZ domain-containing protein n=1 Tax=Sedimenticol... [more]
A0A3M0YG40_9GAMM4.610e-839.24PDZ domain-containing protein n=1 Tax=Gammaproteob... [more]
A0A7C1UD24_9GAMM1.120e-744.44PDZ domain-containing protein n=1 Tax=Thiothrix sp... [more]
A0A2V8NEH0_9BACT1.200e-744.00Uncharacterized protein n=1 Tax=Acidobacteria bact... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001478PDZ domainSMARTSM00228pdz_newcoord: 82..153
e-value: 4.1E-11
score: 52.9
IPR001478PDZ domainPFAMPF13180PDZ_2coord: 93..164
e-value: 3.0E-15
score: 56.3
IPR001478PDZ domainPROSITEPS50106PDZcoord: 84..153
score: 9.149
NoneNo IPR availableGENE3D2.30.42.10coord: 54..169
e-value: 3.1E-18
score: 67.6
NoneNo IPR availablePANTHERPTHR43019FAMILY NOT NAMEDcoord: 78..166
NoneNo IPR availablePANTHERPTHR43019:SF4SERINE ENDOPROTEASE DEGScoord: 78..166
IPR036034PDZ superfamilySUPERFAMILY50156PDZ domain-likecoord: 94..168

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124468contigM-pyrifera_M_contig124468:3..518 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124468.4977.1mRNA_M-pyrifera_M_contig124468.4977.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124468 3..518 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124468.4977.1 ID=prot_M-pyrifera_M_contig124468.4977.1|Name=mRNA_M-pyrifera_M_contig124468.4977.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=172bp
TLFLIVNYESQAQESAPNAAPQSIDPNLSPRQKYAALMSEAHKARLNQHY
SKYYKATLGVVATDASGPLAAHLTNGAPDWWTGVGTNLDGNPGYGVVIMH
VAPGSPADKAGLMKYDIILSFGKHRLASVRQLNALLAKAEPGQNVTLSVI
QVGEKGAVSKVNVTLGWAERIN
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001478PDZ
IPR036034PDZ_sf