prot_M-pyrifera_M_contig12442.4960.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12442.4960.1
Unique Nameprot_M-pyrifera_M_contig12442.4960.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length102
Homology
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BLAST of mRNA_M-pyrifera_M_contig12442.4960.1 vs. uniprot
Match: D7G739_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G739_ECTSI)

HSP 1 Score: 92.8 bits (229), Expect = 7.990e-21
Identity = 50/81 (61.73%), Postives = 62/81 (76.54%), Query Frame = 0 
Query:   15 SSTQHKLEFLEDRVLLVISSLGLLCVTAAIFWVVRQSPDWARGGAGHPGGDEDAAGDGVVLGTRTRVVPGGREATKASRKE 95
            S  + +L FL+D ++LVISS+GLLCVTAA+ WVVRQSPDW +     P G++D  GD  +LG RTRVVPGGREA KA+RKE
Sbjct:    3 SDQEDQLTFLDDTLILVISSVGLLCVTAAVLWVVRQSPDWQKADR-QPAGEQD--GDAGLLGGRTRVVPGGREAAKAARKE 80
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12442.4960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7G739_ECTSI7.990e-2161.73Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 28..48
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 49..102
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..27
NoneNo IPR availableTMHMMTMhelixcoord: 29..48

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12442contigM-pyrifera_M_contig12442:7877..8182 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12442.4960.1mRNA_M-pyrifera_M_contig12442.4960.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12442 7877..8183 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12442.4960.1 ID=prot_M-pyrifera_M_contig12442.4960.1|Name=mRNA_M-pyrifera_M_contig12442.4960.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=102bp
AVLGAGAHSIIRVMSSTQHKLEFLEDRVLLVISSLGLLCVTAAIFWVVRQ
SPDWARGGAGHPGGDEDAAGDGVVLGTRTRVVPGGREATKASRKEAKKRA
KA
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