prot_M-pyrifera_M_contig12439.4953.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig12439.4953.1
Unique Nameprot_M-pyrifera_M_contig12439.4953.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length339
Homology
BLAST of mRNA_M-pyrifera_M_contig12439.4953.1 vs. uniprot
Match: D8LN17_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LN17_ECTSI)

HSP 1 Score: 301 bits (772), Expect = 1.700e-97
Identity = 169/279 (60.57%), Postives = 205/279 (73.48%), Query Frame = 0
Query:   62 ADGVPASHLLLPSLVFHVLVFLCVAVEIPVYAFRFASSVHQFDDGEGFYGEGRPLYALHLSSYLLLFLGSCVIVTLWSDVAVFEPTVWTVLVNRLVIVLGLCYLMVTSLAISVCLGLGGVEYFFTSFAFLLFCAYSIVALLLLGLSFLVLGYLLQRRICRVLVTDSCSVGLTARVVRLNVIVLACFVCFCWRAYMLAALVEVQAEGEVERHFGRGWKRWEWDMRLEWALHVIPCVTMLYLMRRAGQPT-------LTAAPSTVGSGERREFGGGDVEGG 333
            AD V +S +++PSL+FHVLVFLC+AVE+PVYA R+ SS        G     R LYALH++SYLLLF+   V+VTLW+DVAVFEP   T L+NR ++ L +CY++VT +A+SVCLG+G V+YF +SFAFLLFCAYSI  LLLLG SFLVLG LLQ+RICRVLVT SC+  LTAR+VRLNV++LACF CF  RA MLA L++ QAEGE   ++  GWKR E DMRLEWALHVIPCV MLYLMR+AG+P+        T A    G  E   F G DVE G
Sbjct:   61 ADRVASSRVIVPSLLFHVLVFLCLAVEVPVYACRWLSSS---GIAVGLVQGDRSLYALHMTSYLLLFMAFSVVVTLWNDVAVFEPNECTALMNRSMVALCVCYVLVTGIAVSVCLGVGNVKYFLSSFAFLLFCAYSIAVLLLLGASFLVLGCLLQQRICRVLVTGSCTARLTARIVRLNVVMLACFTCFTMRALMLAGLIQAQAEGEESGNYASGWKRREQDMRLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTPAGKEYGGDESTGFSGADVEDG 336          
BLAST of mRNA_M-pyrifera_M_contig12439.4953.1 vs. uniprot
Match: A0A836C8B0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C8B0_9STRA)

HSP 1 Score: 169 bits (428), Expect = 1.860e-45
Identity = 115/283 (40.64%), Postives = 153/283 (54.06%), Query Frame = 0
Query:   65 VPASHLLLPS-LVFHVLVFLCVAVEIPVYAFRFASSVHQFDDGEGFYGEGRPLYALHLSSYLLLFLGSCVIVTLWSDVAVFEPTVWTVLVNRLVIVLGLCYLMVTSLAISVCL-GLGGVEYFFTSFAFLLFCAYSIVALLLLGLSFLVLGYLLQRRICRVL------------------------------------------VTDSCSVGLTARVVRLNVIVLACFVCFCWRAYMLAALVEVQAEGEVERHFGRGWKRWEWDMRLEWALHVIPCVTMLYLMR 303
            +P    LLP   +FHVLVFLC+AVE+PVYA+ + +   Q    E     GR LYALHL+SYLLL    C+IV LWS VA FEP+ W +L NRL++VL + Y +VT++A+  CL      + +FTS  F+ FCA+SI ALLLL   FLVLG L+Q+RIC  L                                                  LT  V+RLN +VL CFVCF  RA +L  L+ ++  G        GW RW+ ++ +EW  +V+PC+ +LYLMR
Sbjct:   69 LPQEESLLPQRAMFHVLVFLCLAVEVPVYAYHYVTLRGQDVSFE----VGRDLYALHLTSYLLLCAAFCIIVMLWSSVASFEPSAWLLLANRLLLVLCVLYFLVTAVAVGRCLCEASSSQSYFTSLPFITFCAFSIGALLLLAACFLVLGCLMQQRICSALGGPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVLTGTVLRLNAVVLTCFVCFSARALLLVRLLRLETAGADALG---GWTRWQQEVYVEWIPNVVPCLALLYLMR 344          
BLAST of mRNA_M-pyrifera_M_contig12439.4953.1 vs. uniprot
Match: A0A7S3XM64_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3XM64_HETAK)

HSP 1 Score: 83.2 bits (204), Expect = 2.620e-14
Identity = 67/246 (27.24%), Postives = 119/246 (48.37%), Query Frame = 0
Query:   75 LVFHVLVFLCVAVEIPVYA-FRFASSVHQFDDGEGFYGEGRPLYALHLSSYLLLFLGSCVIVTLWSDVAVFEP-TVWTVLVNRLVIVLGLCYLMVTSLAISVCLGLGGVEYFFTSFAFLLFCAYSIVALLLLGLSFLVLGYLLQRRICRVLVTDSCS-VGLTARVVRLNVIVLACFVCFCWRAYMLAALVEVQAE-----GEVERHFGRGWKRWEWDMRLEWALHVIPCVTMLYLMRRAGQPTLTA 312
            L+FH L+ L + ++IP+Y  +  A S  + D  E ++     LY +++ SY LLF   C+++ LW+ + +F   + W +++ R ++ + + Y + +  A   C+    +  +  S  ++LF    I  L  L  +FL++G +LQ RICR L           A V RLN ++  C + F  RA +L A +   A                     W +  EW  H+ PC+ ++YL+R A  P +++
Sbjct:   69 LLFHQLILLSLMLQIPLYVCYAIAGSQGEEDSSERYF---EYLYPVNIMSYWLLFCAFCLVINLWASLVIFNTGSRWILVLRRSLVAICILYALASMYACLDCIFSSSLWSWLESGTYVLFDFCCIGVLTFLSGAFLIVGCMLQGRICRALAPQERGRPRFWATVARLNGVIFVCTISFAMRAALLLASLAAGAPYADTVSPAAAAPPAALSVETWLVLAEWVPHLAPCIALMYLLRNASGPEVSS 311          
BLAST of mRNA_M-pyrifera_M_contig12439.4953.1 vs. uniprot
Match: A0A6H5KRT8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRT8_9PHAE)

HSP 1 Score: 59.7 bits (143), Expect = 3.810e-8
Identity = 33/56 (58.93%), Postives = 35/56 (62.50%), Query Frame = 0
Query:  284 MRLEWALHVIPCVTMLYLMRRAGQP------TLTAAPSTVGSGERREFGGGDVEGG 333
            M LEWALHVIPCV MLYLMR+AG+P      T T A    G  ER  F G DVE G
Sbjct:    1 MMLEWALHVIPCVAMLYLMRKAGEPSSSSSSTATTAGKDYGGNERTGFTGADVEDG 56          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig12439.4953.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
D8LN17_ECTSI1.700e-9760.57Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A836C8B0_9STRA1.860e-4540.64Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S3XM64_HETAK2.620e-1427.24Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A6H5KRT8_9PHAE3.810e-858.93Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..5
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 182..186
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 156..181
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 28..74
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 75..97
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 6..27
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 98..116
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 145..155
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 236..255
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 216..235
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 303..339
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 256..285
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 187..215
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 286..302
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 117..144
NoneNo IPR availableTMHMMTMhelixcoord: 151..173
NoneNo IPR availableTMHMMTMhelixcoord: 6..28
NoneNo IPR availableTMHMMTMhelixcoord: 74..96
NoneNo IPR availableTMHMMTMhelixcoord: 193..215
NoneNo IPR availableTMHMMTMhelixcoord: 116..138
NoneNo IPR availableTMHMMTMhelixcoord: 236..258

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig12439contigM-pyrifera_M_contig12439:3376..7139 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig12439.4953.1mRNA_M-pyrifera_M_contig12439.4953.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig12439 3376..7139 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig12439.4953.1 ID=prot_M-pyrifera_M_contig12439.4953.1|Name=mRNA_M-pyrifera_M_contig12439.4953.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=339bp
MREPNLIPVGLLAMCVVSAAALARLIAVVKIFRRQRGYYSAVNNIGTSTN
GSSPSPANTWSADGVPASHLLLPSLVFHVLVFLCVAVEIPVYAFRFASSV
HQFDDGEGFYGEGRPLYALHLSSYLLLFLGSCVIVTLWSDVAVFEPTVWT
VLVNRLVIVLGLCYLMVTSLAISVCLGLGGVEYFFTSFAFLLFCAYSIVA
LLLLGLSFLVLGYLLQRRICRVLVTDSCSVGLTARVVRLNVIVLACFVCF
CWRAYMLAALVEVQAEGEVERHFGRGWKRWEWDMRLEWALHVIPCVTMLY
LMRRAGQPTLTAAPSTVGSGERREFGGGDVEGGGKDAKD
back to top