prot_M-pyrifera_M_contig124269.4944.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124269.4944.1
Unique Nameprot_M-pyrifera_M_contig124269.4944.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length173
Homology
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A4P5YL91_9BACT (Sugar ABC transporter permease n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5YL91_9BACT)

HSP 1 Score: 204 bits (520), Expect = 1.710e-62
Identity = 97/173 (56.07%), Postives = 134/173 (77.46%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 173
            + LGI GLL+ +CL+TA     F S  N++NT+RW++LFGI+SIGV++VII+GGIDLSIGS +GL+GC+LAW LT     V A++  +   S+ IGL HGLLITK+ LQPFVVTLCGLL+YRG AR++T+D SVGFG+ F GL  +A+GKI +PF ++F +P PF+ ++ +A+
Sbjct:    3 RILGITGLLVFVCLFTALKKPEFLSAYNLQNTIRWSSLFGIVSIGVAFVIITGGIDLSIGSTIGLTGCLLAWALTQKHWGVGASLALVLGCSVLIGLTHGLLITKMKLQPFVVTLCGLLIYRGTARFITNDQSVGFGSDFKGLSKLADGKIPLPFTDAFTLPAPFVTMLIVAI 175          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A6I1JWV1_9BACT (Ribose transport system permease protein n=1 Tax=Verrucomicrobia subdivision 3 bacterium TaxID=2052186 RepID=A0A6I1JWV1_9BACT)

HSP 1 Score: 202 bits (513), Expect = 1.990e-61
Identity = 101/172 (58.72%), Postives = 135/172 (78.49%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLA 172
            K LGI GLL+ +CL+ A+ S +F SG N+EN +R TALFG+I IGV++VI++GGIDLSIGSV+ L GC L WLLT  + S+PAA+LA+  +S+ IGL HGLLITK+ LQPF+VTLCGL+LYRG+ R  T D +VGFG G+  L+ +A GKI+IPFV+ F IP P+++L+ +A
Sbjct:    3 KLLGIFGLLLAVCLFAAWASESFRSGYNVENLIRRTALFGVIGIGVTFVIVTGGIDLSIGSVICLVGCGLPWLLTVQKWSLPAALLAVAVVSMGIGLMHGLLITKLRLQPFIVTLCGLMLYRGITRGFTKDQTVGFGDGYKDLRVLATGKISIPFVQGFEIPAPWVVLVIVA 174          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A7Z9HTZ4_9BACT (ABC transporter permease n=1 Tax=Candidatus Hydrogenedentes bacterium TaxID=2030809 RepID=A0A7Z9HTZ4_9BACT)

HSP 1 Score: 198 bits (504), Expect = 3.620e-60
Identity = 105/172 (61.05%), Postives = 134/172 (77.91%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLA 172
            K LGI+ LLI IC +TA  + NF +  N++NTLRWTAL+G+ISIGV++VIISGGIDLSIGSVVGL+G +L  LLT +++SV  A+LA+  +SLAIGL HGLLITKVGLQPFVVTLCGLL YRG AR+LT+D S+G+   F GL+ +A G I  P  E F IP P ++++ +A
Sbjct:    3 KILGISLLLIAICTFTAIMNPNFLNAYNVQNTLRWTALYGVISIGVAFVIISGGIDLSIGSVVGLTGSLLVLLLTKHDVSVSLALLAVLVLSLAIGLLHGLLITKVGLQPFVVTLCGLLFYRGAARFLTNDQSLGYAQDFDGLRQLAIGSI--PITEEFGIPYPLVVMLTIA 172          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A518A9E0_9PLAN (Ribose transport system permease protein RbsC n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518A9E0_9PLAN)

HSP 1 Score: 198 bits (504), Expect = 4.280e-60
Identity = 99/173 (57.23%), Postives = 139/173 (80.35%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 173
            K LGI  LLIV+CL TA ++ +F S  N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +LL ++   VP A++++  +++ IGLAHGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFG G+TGL+ +A GKI++PF+E F +P PF+++I LA+
Sbjct:    3 KILGILILLIVVCLITAVSNKSFISAYNLQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPYLLVEHGFPVPVALISVMTLAVLIGLAHGLLITKLKLQPFIVTLCGLLIYRGIARGITEDQTQGFGNGYTGLRYLATGKISLPFIEGFKLPVPFLIMIFLAI 175          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A517VUU7_9PLAN (Ribose transport system permease protein RbsC n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517VUU7_9PLAN)

HSP 1 Score: 198 bits (503), Expect = 6.220e-60
Identity = 100/173 (57.80%), Postives = 138/173 (79.77%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 173
            K LGI  LLIV+C+ TA ++ NF+S  N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L ++L +   S+ +A+L ++ +S+AIGL HGLLITK+ LQPFVVTLCGLL+YRG+AR +T D + GFGT + GL+ +A GKI +PF+E F +P PF++++GLAL
Sbjct:    3 KVLGILILLIVVCIITAISNENFFSAYNMQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPFVLVEKGFSITSALLLVSTVSIAIGLFHGLLITKLKLQPFVVTLCGLLIYRGIARGITQDETQGFGTAYAGLRYLAIGKIDLPFIEGFKLPVPFLIMLGLAL 175          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A518IFL3_9PLAN (Ribose transport system permease protein RbsC n=2 Tax=Gimesia TaxID=1649453 RepID=A0A518IFL3_9PLAN)

HSP 1 Score: 196 bits (497), Expect = 4.980e-59
Identity = 98/173 (56.65%), Postives = 137/173 (79.19%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 173
            K LGI  LLIV+C+ TA ++ NF S  N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +++ + + S+ +A+L    +S+AIGL HGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFGTG+T L+ +A GK+ IPF E F +P PF++++GLA+
Sbjct:    3 KILGILILLIVVCVVTAVSNENFVSAYNMQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPYMIVEKQFSIASALLLAGTISIAIGLFHGLLITKLKLQPFIVTLCGLLIYRGIARGITEDQTQGFGTGYTSLRYLATGKVEIPFWEGFKLPVPFLIMLGLAI 175          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A6N6Q4Q6_9BACT (ABC transporter permease n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A6N6Q4Q6_9BACT)

HSP 1 Score: 194 bits (494), Expect = 1.530e-58
Identity = 99/173 (57.23%), Postives = 133/173 (76.88%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 173
            K  GI GL + + ++TA  +  F S  N+EN +RW +LFGIISIGVS+VII+GGIDLSIGS++GL+G ++AWLLT    SVPA ++ +  +SL++GLAHGLLIT++ LQPFVVTLCGLLLYRG+AR++TDD S GFG    GL+++A GKI  P   SF+IP PF +L+ +A+
Sbjct:    3 KIFGILGLFLAVFVFTALRNPQFVSAYNLENLIRWISLFGIISIGVSFVIITGGIDLSIGSLIGLTGSLMAWLLTHRGWSVPATLVTVLLLSLSVGLAHGLLITRLRLQPFVVTLCGLLLYRGIARFITDDQSQGFGNSHEGLRAIAIGKI--PVGSSFSIPVPFFILLLIAI 173          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A4P5QT83_9BACT (Sugar ABC transporter permease n=1 Tax=Verrucomicrobia bacterium TaxID=2026799 RepID=A0A4P5QT83_9BACT)

HSP 1 Score: 194 bits (493), Expect = 2.100e-58
Identity = 102/173 (58.96%), Postives = 130/173 (75.14%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTG-FTGLKSVANGKIAIPFVESFAIPTPFILLIGLA 172
            K LGI GLLIV+C+ TA  S  F +G N+EN  R TALFGIISIGV++VI +GGIDLSIGSVV L GC L WLL  +   +PAA+  + A+S+ IGL HGL+ITK+ + PFVVTLCGL++YRG+AR  T+D  VGFG G F GL+ +A G+IA+PFV  F+IP P+I L+ +A
Sbjct:    3 KILGITGLLIVVCIVTALASDRFLTGYNLENLFRRTALFGIISIGVAFVIATGGIDLSIGSVVCLVGCGLPWLLVTHHWPLPAALAMVAAVSVGIGLFHGLIITKLRIPPFVVTLCGLMMYRGIARGFTNDQQVGFGNGGFPGLRKLATGEIAVPFVHGFSIPAPWITLVAVA 175          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A517VGY9_9PLAN (Ribose transport system permease protein RbsC n=9 Tax=Planctomycetaceae TaxID=126 RepID=A0A517VGY9_9PLAN)

HSP 1 Score: 190 bits (482), Expect = 8.760e-57
Identity = 102/173 (58.96%), Postives = 132/173 (76.30%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 173
            K LGI  LLIV+C  TA ++ NF S  NI+N  R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +LL    + VP A L +  +S+ IGLAHGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFGT   GL+ +A GKI +PF+E F +P PF++++GLAL
Sbjct:    3 KILGILILLIVVCGVTAISNENFVSAYNIQNVTRLTSLFGIISIGVAFVIISGGIDLSIGSVICLIGTMLPYLLAKG-VPVPLAFLLVGVLSICIGLAHGLLITKLKLQPFIVTLCGLLIYRGVARGITEDQTQGFGTAHAGLRYLATGKIDLPFIEGFKLPVPFLIMLGLAL 174          
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Match: A0A517XEP0_9PLAN (Ribose transport system permease protein RbsC n=5 Tax=Planctomycetaceae TaxID=126 RepID=A0A517XEP0_9PLAN)

HSP 1 Score: 186 bits (471), Expect = 3.740e-55
Identity = 95/173 (54.91%), Postives = 133/173 (76.88%), Query Frame = 0
Query:    1 KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVIISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHGLLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGKIAIPFVESFAIPTPFILLIGLAL 173
            K LGI  LLI +C+ TA ++ +F+S  N++N +R T+LFGIISIGV++VIISGGIDLSIGSV+ L G +L +++ +  + VP A+L    +S+ IGL+HGLLITK+ LQPF+VTLCGLL+YRG+AR +T+D + GFG     L+ +A GKI IPF+E F +P PF+++IG+AL
Sbjct:    3 KILGILILLIFVCIVTAASNEHFFSAYNMQNVIRLTSLFGIISIGVAFVIISGGIDLSIGSVICLVGSLLPYMIMEMSVPVPLALLFSAVLSIVIGLSHGLLITKLKLQPFIVTLCGLLIYRGIARGITEDQTQGFGATHDSLRYLATGKINIPFLEGFRLPVPFLIMIGVAL 175          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124269.4944.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4P5YL91_9BACT1.710e-6256.07Sugar ABC transporter permease n=1 Tax=Verrucomicr... [more]
A0A6I1JWV1_9BACT1.990e-6158.72Ribose transport system permease protein n=1 Tax=V... [more]
A0A7Z9HTZ4_9BACT3.620e-6061.05ABC transporter permease n=1 Tax=Candidatus Hydrog... [more]
A0A518A9E0_9PLAN4.280e-6057.23Ribose transport system permease protein RbsC n=2 ... [more]
A0A517VUU7_9PLAN6.220e-6057.80Ribose transport system permease protein RbsC n=1 ... [more]
A0A518IFL3_9PLAN4.980e-5956.65Ribose transport system permease protein RbsC n=2 ... [more]
A0A6N6Q4Q6_9BACT1.530e-5857.23ABC transporter permease n=1 Tax=Verrucomicrobia b... [more]
A0A4P5QT83_9BACT2.100e-5858.96Sugar ABC transporter permease n=1 Tax=Verrucomicr... [more]
A0A517VGY9_9PLAN8.760e-5758.96Ribose transport system permease protein RbsC n=9 ... [more]
A0A517XEP0_9PLAN3.740e-5554.91Ribose transport system permease protein RbsC n=5 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001851ABC transporter, permeasePFAMPF02653BPD_transp_2coord: 28..166
e-value: 8.2E-18
score: 64.5
NoneNo IPR availablePANTHERPTHR32196FAMILY NOT NAMEDcoord: 1..173
NoneNo IPR availablePANTHERPTHR32196:SF15coord: 1..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..14
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 129..150
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 35..51
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 58..75
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 52..57
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 104..109
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 173..173
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 20..34
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 76..80
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 110..128
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 15..19
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 81..103
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 151..172
NoneNo IPR availableTMHMMTMhelixcoord: 110..129
NoneNo IPR availableTMHMMTMhelixcoord: 149..171
NoneNo IPR availableTMHMMTMhelixcoord: 4..26
NoneNo IPR availableTMHMMTMhelixcoord: 33..55
NoneNo IPR availableTMHMMTMhelixcoord: 81..103

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124269contigM-pyrifera_M_contig124269:1..519 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124269.4944.1mRNA_M-pyrifera_M_contig124269.4944.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124269 1..519 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124269.4944.1 ID=prot_M-pyrifera_M_contig124269.4944.1|Name=mRNA_M-pyrifera_M_contig124269.4944.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp
KTLGIAGLLIVICLYTAYNSSNFYSGNNIENTLRWTALFGIISIGVSYVI
ISGGIDLSIGSVVGLSGCVLAWLLTDNEMSVPAAMLAITAMSLAIGLAHG
LLITKVGLQPFVVTLCGLLLYRGLARYLTDDGSVGFGTGFTGLKSVANGK
IAIPFVESFAIPTPFILLIGLAL
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001851ABC_transp_permease