prot_M-pyrifera_M_contig124224.4936.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124224.4936.1
Unique Nameprot_M-pyrifera_M_contig124224.4936.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length52
Homology
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: E4URH1_ARTGP (Structural maintenance of chromosomes protein n=12 Tax=Arthrodermataceae TaxID=34384 RepID=E4URH1_ARTGP)

HSP 1 Score: 67.0 bits (162), Expect = 1.170e-11
Identity = 26/52 (50.00%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            MPLNRL+ R+S + R +D +P++E+++ D RY+PA QQVFGRT++C ++ +A
Sbjct:  579 MPLNRLKPRASNIPRASDTIPMIEKLQYDPRYEPAFQQVFGRTIICPNLQIA 630          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: A0A080WKH4_TRIRC (Chromosome segregation protein sudA n=1 Tax=Trichophyton rubrum (strain ATCC MYA-4607 / CBS 118892) TaxID=559305 RepID=A0A080WKH4_TRIRC)

HSP 1 Score: 65.5 bits (158), Expect = 4.090e-11
Identity = 25/52 (48.08%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            MPLNRL+ R+S + R +D +P++E+++ D +Y+PA QQVFGRT++C ++ +A
Sbjct:   80 MPLNRLKPRASNIPRASDTIPMIEKLQYDPQYEPAFQQVFGRTIICPNLQIA 131          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: A0A022XMD7_TRISD (Chromosome segregation protein sudA n=1 Tax=Trichophyton soudanense CBS 452.61 TaxID=1215331 RepID=A0A022XMD7_TRISD)

HSP 1 Score: 65.5 bits (158), Expect = 4.090e-11
Identity = 25/52 (48.08%), Postives = 42/52 (80.77%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            MPLNRL+ R+S + R +D +P++E+++ D +Y+PA QQVFGRT++C ++ +A
Sbjct:   80 MPLNRLKPRASNIPRASDTIPMIEKLQYDPQYEPAFQQVFGRTIICPNLQIA 131          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: UPI00077B0A3B (structural maintenance of chromosomes protein 3-like n=1 Tax=Acropora digitifera TaxID=70779 RepID=UPI00077B0A3B)

HSP 1 Score: 59.3 bits (142), Expect = 6.100e-9
Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            MPLNRLQS+  E   + D LP++ ++R D  ++PA+  VFG+TL+C +M+VA
Sbjct:  530 MPLNRLQSKEHEYPSSPDALPMINKLRFDEAFRPAMNLVFGKTLICRNMEVA 581          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: A0A6A6GFA2_9PEZI (Structural maintenance of chromosomes protein n=2 Tax=Elsinoe TaxID=40996 RepID=A0A6A6GFA2_9PEZI)

HSP 1 Score: 59.3 bits (142), Expect = 6.100e-9
Identity = 24/52 (46.15%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            +PLNR+++R++ L +  D +PL+ +++ DA Y+PA QQVFG+T++C S+ VA
Sbjct:  579 IPLNRIRARATNLPKANDAVPLLSKMKYDAVYEPAFQQVFGKTIVCPSLQVA 630          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: UPI001CF51BD7 (structural maintenance of chromosomes protein 3-like isoform X1 n=3 Tax=Acropora millepora TaxID=45264 RepID=UPI001CF51BD7)

HSP 1 Score: 59.3 bits (142), Expect = 6.100e-9
Identity = 25/52 (48.08%), Postives = 38/52 (73.08%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            MPLNRLQS+  E   + D LP++ ++R D  ++PA+  VFG+TL+C +M+VA
Sbjct:  581 MPLNRLQSKEHEYPSSPDALPMINKLRFDEAFRPAMNLVFGKTLICRNMEVA 632          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: A0A4V1J5Q4_9FUNG (Structural maintenance of chromosomes protein n=1 Tax=Dimargaris cristalligena TaxID=215637 RepID=A0A4V1J5Q4_9FUNG)

HSP 1 Score: 58.9 bits (141), Expect = 8.340e-9
Identity = 23/52 (44.23%), Postives = 40/52 (76.92%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            MPLNRL+ R S+    +D +P+V +++  +R++PA+QQVFG+ L+C +++VA
Sbjct:  579 MPLNRLRPRPSDFPSASDAIPMVSKLQYASRFEPAIQQVFGKALICPTLEVA 630          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: UPI001EB0A468 (structural maintenance of chromosomes protein 3-like n=2 Tax=Haliotis TaxID=6452 RepID=UPI001EB0A468)

HSP 1 Score: 58.9 bits (141), Expect = 8.350e-9
Identity = 24/52 (46.15%), Postives = 39/52 (75.00%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            MPLNRL SR +    T D +P++++I+ + ++ PA++ VFG+TL+C SM+VA
Sbjct:  588 MPLNRLDSRDTIYPDTQDAIPMIQKIKYEMKFDPAIKHVFGKTLVCRSMEVA 639          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: A0A2G5BE40_COERN (Structural maintenance of chromosomes protein n=1 Tax=Coemansia reversa (strain ATCC 12441 / NRRL 1564) TaxID=763665 RepID=A0A2G5BE40_COERN)

HSP 1 Score: 58.2 bits (139), Expect = 1.560e-8
Identity = 23/51 (45.10%), Postives = 39/51 (76.47%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDV 51
            +PLNR+++ S+     +D +P++E++R D R+Q A QQVFG+T++C S+DV
Sbjct:  579 IPLNRVRASSTTYPEASDAIPMIERLRFDQRFQRAFQQVFGKTIICPSLDV 629          
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Match: A0A2K1R3H2_9PEZI (Structural maintenance of chromosomes protein n=1 Tax=Sphaceloma murrayae TaxID=2082308 RepID=A0A2K1R3H2_9PEZI)

HSP 1 Score: 58.2 bits (139), Expect = 1.560e-8
Identity = 22/52 (42.31%), Postives = 41/52 (78.85%), Query Frame = 0
Query:    1 MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMDVA 52
            +PLNR+++R++ L R AD +P++ +++ D R++PA QQVFG+T++C  + +A
Sbjct:  579 IPLNRVRARATNLPRAADAVPILLKMKYDERFEPAFQQVFGKTIVCPELQIA 630          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124224.4936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
E4URH1_ARTGP1.170e-1150.00Structural maintenance of chromosomes protein n=12... [more]
A0A080WKH4_TRIRC4.090e-1148.08Chromosome segregation protein sudA n=1 Tax=Tricho... [more]
A0A022XMD7_TRISD4.090e-1148.08Chromosome segregation protein sudA n=1 Tax=Tricho... [more]
UPI00077B0A3B6.100e-948.08structural maintenance of chromosomes protein 3-li... [more]
A0A6A6GFA2_9PEZI6.100e-946.15Structural maintenance of chromosomes protein n=2 ... [more]
UPI001CF51BD76.100e-948.08structural maintenance of chromosomes protein 3-li... [more]
A0A4V1J5Q4_9FUNG8.340e-944.23Structural maintenance of chromosomes protein n=1 ... [more]
UPI001EB0A4688.350e-946.15structural maintenance of chromosomes protein 3-li... [more]
A0A2G5BE40_COERN1.560e-845.10Structural maintenance of chromosomes protein n=1 ... [more]
A0A2K1R3H2_9PEZI1.560e-842.31Structural maintenance of chromosomes protein n=1 ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010935SMCs flexible hingePFAMPF06470SMC_hingecoord: 1..52
e-value: 8.8E-7
score: 29.2
NoneNo IPR availablePANTHERPTHR43977FAMILY NOT NAMEDcoord: 1..52
IPR036277SMCs flexible hinge superfamilySUPERFAMILY75553Smc hinge domaincoord: 1..52

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124224contigM-pyrifera_M_contig124224:364..519 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124224.4936.1mRNA_M-pyrifera_M_contig124224.4936.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124224 355..519 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124224.4936.1 ID=prot_M-pyrifera_M_contig124224.4936.1|Name=mRNA_M-pyrifera_M_contig124224.4936.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=52bp
MPLNRLQSRSSELVRTADVLPLVEQIRTDARYQPAVQQVFGRTLLCSSMD
VA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010935SMC_hinge
IPR036277SMC_hinge_sf