prot_M-pyrifera_M_contig124210.4931.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig124210.4931.1
Unique Name	prot_M-pyrifera_M_contig124210.4931.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	171

Homology

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A352IP13_9GAMM (Isoleucine--tRNA ligase (Fragment) n=1 Tax=Marinobacter adhaerens TaxID=1033846 RepID=A0A352IP13_9GAMM)

HSP 1 Score: 340 bits (871), Expect = 6.140e-112
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEEL EDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct:  294 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELDEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 464

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: E4PNF8_MARAH (Isoleucine--tRNA ligase n=44 Tax=Marinobacter TaxID=2742 RepID=E4PNF8_MARAH)

HSP 1 Score: 340 bits (871), Expect = 1.170e-108
Identity = 170/171 (99.42%), Postives = 170/171 (99.42%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEEL EDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELDEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A139D253_9GAMM (Isoleucyl-tRNA synthetase (Fragment) n=2 Tax=Marinobacter sp. T13-3 TaxID=1794906 RepID=A0A139D253_9GAMM)

HSP 1 Score: 320 bits (820), Expect = 1.520e-107
Identity = 158/171 (92.40%), Postives = 166/171 (97.08%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKS GNVIAPQEVMNELGADILRLWVAATDYSGEMTVSK IL+QTADGYRRIRNTSRFLLSNLTGFDP +HMVAPEDMIALDRWMVD+ALQLQ+E+HED+GNYAFLRIY KVYNFCE+TLGGFYLDIIKDRQYTTQADSLARRS QTAL+HVAEALVRWIAPILSFTADE
Sbjct:   96 MSKSRGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKGILKQTADGYRRIRNTSRFLLSNLTGFDPAKHMVAPEDMIALDRWMVDKALQLQKEIHEDFGNYAFLRIYHKVYNFCESTLGGFYLDIIKDRQYTTQADSLARRSAQTALFHVAEALVRWIAPILSFTADE 266

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: SYI_MARN8 (Isoleucine--tRNA ligase n=50 Tax=Marinobacter TaxID=2742 RepID=SYI_MARN8)

HSP 1 Score: 336 bits (862), Expect = 2.480e-107
Identity = 166/171 (97.08%), Postives = 170/171 (99.42%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWV+ATDYSGEM+VSKDILRQTADGYRRIRNT+RFLLSNLTGFDP+QHMVAPEDMIALDRWMVDRALQLQ ELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVSATDYSGEMSVSKDILRQTADGYRRIRNTARFLLSNLTGFDPDQHMVAPEDMIALDRWMVDRALQLQNELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A1I0GRC5_9GAMM (Isoleucine--tRNA ligase n=3 Tax=Marinobacter TaxID=2742 RepID=A0A1I0GRC5_9GAMM)

HSP 1 Score: 327 bits (839), Expect = 5.930e-104
Identity = 162/171 (94.74%), Postives = 167/171 (97.66%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWV+ATDYSGEMTVSKDIL+QTADGYRRIRNT+RFLLSNLTGFDP +HMV PEDMIALDRWMVDRALQLQ EL+EDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTT ADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVSATDYSGEMTVSKDILKQTADGYRRIRNTARFLLSNLTGFDPAEHMVMPEDMIALDRWMVDRALQLQNELNEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTPADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: UPI001107D2DD (isoleucine--tRNA ligase n=1 Tax=Marinobacter alexandrii TaxID=2570351 RepID=UPI001107D2DD)

HSP 1 Score: 327 bits (837), Expect = 1.170e-103
Identity = 163/171 (95.32%), Postives = 166/171 (97.08%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNL+GFDPEQH VAPEDMIALDRWMVDRALQLQ EL +DY NYAFLRIYQKVYNFCE+TLGGFYLDIIKDRQYTT ADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLSGFDPEQHTVAPEDMIALDRWMVDRALQLQNELQDDYQNYAFLRIYQKVYNFCESTLGGFYLDIIKDRQYTTPADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: UPI0019D425C0 (isoleucine--tRNA ligase n=1 Tax=Marinobacter sp. LPB0319 TaxID=2769486 RepID=UPI0019D425C0)

HSP 1 Score: 326 bits (836), Expect = 1.640e-103
Identity = 162/171 (94.74%), Postives = 166/171 (97.08%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNT+RFLLSNLTGFDPEQHMVAP++MIALDRWMVDR LQLQ EL EDY NYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTT ADSLARRSCQTALYHVAEA+VRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTARFLLSNLTGFDPEQHMVAPKEMIALDRWMVDRTLQLQNELQEDYENYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTPADSLARRSCQTALYHVAEAMVRWIAPILSFTADE 776

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: M7CPE7_9GAMM (Isoleucine--tRNA ligase n=5 Tax=Marinobacter TaxID=2742 RepID=M7CPE7_9GAMM)

HSP 1 Score: 326 bits (835), Expect = 2.290e-103
Identity = 163/171 (95.32%), Postives = 165/171 (96.49%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNT+RFLLSNL GFDP QHMV P DMIALDRWMVDRALQLQ EL+EDY NYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTARFLLSNLNGFDPAQHMVEPADMIALDRWMVDRALQLQNELNEDYQNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A1M6VVA4_9GAMM (Isoleucine--tRNA ligase n=17 Tax=root TaxID=1 RepID=A0A1M6VVA4_9GAMM)

HSP 1 Score: 325 bits (834), Expect = 3.210e-103
Identity = 161/171 (94.15%), Postives = 167/171 (97.66%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWV+ATDYSGEMTVSKDILRQTADGYRRIRNTSRFL+SNLTGFDP+QHMVAP++MIALDRWMVDRA QLQ ELHEDY NY FLRIYQKVY+FCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVSATDYSGEMTVSKDILRQTADGYRRIRNTSRFLMSNLTGFDPKQHMVAPDEMIALDRWMVDRAQQLQNELHEDYQNYDFLRIYQKVYSFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 776

[Close]

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Match: A0A1V2DVH6_9GAMM (Isoleucine--tRNA ligase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=A0A1V2DVH6_9GAMM)

HSP 1 Score: 325 bits (834), Expect = 3.210e-103
Identity = 161/171 (94.15%), Postives = 166/171 (97.08%), Query Frame = 0

Query:    1 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHEDYGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTALYHVAEALVRWIAPILSFTADE 171
            MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNT+RFLLSNL GFDPEQHMVAPE MIALDRW+VDR LQLQEEL EDYGNYAFLRIYQK+YNFCEATLGGFYLDIIKDRQYTT+ADSLARRSCQTA+YHV EALVRWIAPILSFTADE
Sbjct:  606 MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGYRRIRNTARFLLSNLNGFDPEQHMVAPEAMIALDRWIVDRTLQLQEELTEDYGNYAFLRIYQKIYNFCEATLGGFYLDIIKDRQYTTRADSLARRSCQTAMYHVIEALVRWIAPILSFTADE 776

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig124210.4931.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A352IP13_9GAMM	6.140e-112	99.42	Isoleucine--tRNA ligase (Fragment) n=1 Tax=Marinob...	[more]
E4PNF8_MARAH	1.170e-108	99.42	Isoleucine--tRNA ligase n=44 Tax=Marinobacter TaxI...	[more]
A0A139D253_9GAMM	1.520e-107	92.40	Isoleucyl-tRNA synthetase (Fragment) n=2 Tax=Marin...	[more]
SYI_MARN8	2.480e-107	97.08	Isoleucine--tRNA ligase n=50 Tax=Marinobacter TaxI...	[more]
A0A1I0GRC5_9GAMM	5.930e-104	94.74	Isoleucine--tRNA ligase n=3 Tax=Marinobacter TaxID...	[more]
UPI001107D2DD	1.170e-103	95.32	isoleucine--tRNA ligase n=1 Tax=Marinobacter alexa...	[more]
UPI0019D425C0	1.640e-103	94.74	isoleucine--tRNA ligase n=1 Tax=Marinobacter sp. L...	[more]
M7CPE7_9GAMM	2.290e-103	95.32	Isoleucine--tRNA ligase n=5 Tax=Marinobacter TaxID...	[more]
A0A1M6VVA4_9GAMM	3.210e-103	94.15	Isoleucine--tRNA ligase n=17 Tax=root TaxID=1 RepI...	[more]
A0A1V2DVH6_9GAMM	3.210e-103	94.15	Isoleucine--tRNA ligase n=3 Tax=Gammaproteobacteri...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	1.10.730.20		coord: 39..171 e-value: 5.6E-50 score: 172.3
None	No IPR available	PANTHER	PTHR42765:SF1	ISOLEUCINE--TRNA LIGASE, MITOCHONDRIAL	coord: 1..171
None	No IPR available	PANTHER	PTHR42765	FAMILY NOT NAMED	coord: 1..171
None	No IPR available	SUPERFAMILY	52374	Nucleotidylyl transferase	coord: 1..63
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..38 e-value: 5.8E-10 score: 40.6
IPR013155	Methionyl/Valyl/Leucyl/Isoleucyl-tRNA synthetase, anticodon-binding	PFAM	PF08264	Anticodon_1	coord: 83..171 e-value: 4.7E-19 score: 68.8
IPR002300	Aminoacyl-tRNA synthetase, class Ia	PFAM	PF00133	tRNA-synt_1	coord: 1..38 e-value: 1.1E-9 score: 37.2
IPR009080	Aminoacyl-tRNA synthetase, class Ia, anticodon-binding	SUPERFAMILY	47323	Anticodon-binding domain of a subclass of class I aminoacyl-tRNA synthetases	coord: 50..171

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig124210	contig	M-pyrifera_M_contig124210:8..520 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig124210.4931.1	mRNA_M-pyrifera_M_contig124210.4931.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig124210 2..520 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig124210.4931.1 ID=prot_M-pyrifera_M_contig124210.4931.1|Name=mRNA_M-pyrifera_M_contig124210.4931.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=171bp
MSKSLGNVIAPQEVMNELGADILRLWVAATDYSGEMTVSKDILRQTADGY
RRIRNTSRFLLSNLTGFDPEQHMVAPEDMIALDRWMVDRALQLQEELHED
YGNYAFLRIYQKVYNFCEATLGGFYLDIIKDRQYTTQADSLARRSCQTAL
YHVAEALVRWIAPILSFTADE

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR013155	M/V/L/I-tRNA-synth_anticd-bd
IPR002300	aa-tRNA-synth_Ia
IPR009080	tRNAsynth_Ia_anticodon-bd