prot_M-pyrifera_M_contig124202.4928.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124202.4928.1
Unique Nameprot_M-pyrifera_M_contig124202.4928.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length126
Homology
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: A0A8K1CHX8_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHX8_PYTOL)

HSP 1 Score: 110 bits (275), Expect = 1.230e-25
Identity = 56/120 (46.67%), Postives = 78/120 (65.00%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKEDARQAAARVCTGLARL 124
            ++ F+V  CYFPITFTPPPNDP G+T EDL++ LR  FAA D++A  VLP LLEKL+S   +AK D+ +TL+    AY+      Y   +  AL+H+ V GEK++  +A+ +  T  A L
Sbjct:  221 QQYFDVVSCYFPITFTPPPNDPYGITSEDLITSLRKAFAASDLLARHVLPFLLEKLSSTVTEAKLDSIQTLVFCCEAYSINVTLLYLHTIATALYHEVVKGEKKEVIEASLKAITRFASL 340          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: A0A5D6XS49_9STRA (MMS19 nucleotide excision repair protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XS49_9STRA)

HSP 1 Score: 107 bits (266), Expect = 2.020e-24
Identity = 54/110 (49.09%), Postives = 73/110 (66.36%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKEDARQAA 114
            +  F+V  CYFPITFTPPPNDP G+T E+L+  LR  FAA D++A   +P LLEKLAS   +AK DA +TL+    AY   AL  +   V +AL+H+ V GE+++  +AA
Sbjct:  227 QHYFDVVSCYFPITFTPPPNDPYGITSEELIGSLRRAFAASDLLAKHAVPFLLEKLASTVVEAKLDALQTLVFCCEAYAVNALLLHMVPVANALYHEVVKGERKEVIEAA 336          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: A0A3M6VKJ3_9STRA (MMS19 nucleotide excision repair protein n=1 Tax=Peronospora effusa TaxID=542832 RepID=A0A3M6VKJ3_9STRA)

HSP 1 Score: 105 bits (262), Expect = 7.010e-24
Identity = 59/126 (46.83%), Postives = 80/126 (63.49%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKED----ARQAAARVCTGLARLHA 126
            ++ F++  CYFPI FTPPPNDP G+T E+L+  LR  FAA D++AP VLP LL+KLAS   +AK DA +TL+     Y+  AL     AV  AL+ + + GEK++    ARQA +R    +AR  A
Sbjct:  238 QQYFDIVSCYFPIIFTPPPNDPYGITSEELILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIIEARQAISRFSGVVARAKA 363          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: K3WEQ0_GLOUD (MMS19 nucleotide excision repair protein n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WEQ0_GLOUD)

HSP 1 Score: 105 bits (261), Expect = 9.530e-24
Identity = 52/112 (46.43%), Postives = 76/112 (67.86%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKEDARQAAAR 116
            ++ F+V  CYFPITFTPPPNDP G+T E+L+  LR  FAA D++A  VLP LLEKL+S   +AK D+ +TL+    AY+      +  ++ +AL+H+ V GEK++  +A+ R
Sbjct:  225 QQYFDVVSCYFPITFTPPPNDPYGITSEELILSLRKAFAASDLLAKHVLPFLLEKLSSTVVEAKLDSLQTLVFCCEAYSINVALLHMLSIANALYHEVVKGEKKEVIEASLR 336          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: D0NXI8_PHYIT (MMS19 nucleotide excision repair protein n=10 Tax=Phytophthora TaxID=4783 RepID=D0NXI8_PHYIT)

HSP 1 Score: 104 bits (260), Expect = 1.300e-23
Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKED----ARQAAARVCTGLARLHA 126
            ++ F+V  CYFPI FTPPPNDP G+T E L+  LR  FAA D++AP VLP LL+KLAS   +AK DA +TL+     Y+  AL     AV  AL+ + + GEK++    ARQA +R    +AR  A
Sbjct:  266 QQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDAIQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRFSGVVARAKA 391          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: A0A3R7JFL1_9STRA (MMS19 nucleotide excision repair protein n=1 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7JFL1_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.320e-23
Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKED----ARQAAARVCTGLARLHA 126
            ++ F+V  CYFPI FTPPPNDP G+T E L+  LR  FAA D++AP VLP LL+KLAS   +AK DA +TL+     Y+  AL     AV  AL+ + + GEK++    ARQA +R    +AR  A
Sbjct:  608 QQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVITEARQAISRFSGVVARAKA 733          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: A0A421GLT5_9STRA (MMS19 nucleotide excision repair protein n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A421GLT5_9STRA)

HSP 1 Score: 104 bits (260), Expect = 1.320e-23
Identity = 60/126 (47.62%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKED----ARQAAARVCTGLARLHA 126
            ++ F+V  CYFPI FTPPPNDP G+T E L+  LR  FAA D++AP VLP LL+KLAS   +AK DA +TL+     Y+  AL     AV  AL+ + + GEK++    ARQA +R    +AR  A
Sbjct:  609 QQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVITEARQAISRFSGVVARAKA 734          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: H3GFF5_PHYRM (MMS19 nucleotide excision repair protein n=22 Tax=Phytophthora TaxID=4783 RepID=H3GFF5_PHYRM)

HSP 1 Score: 104 bits (259), Expect = 1.780e-23
Identity = 59/126 (46.83%), Postives = 79/126 (62.70%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKED----ARQAAARVCTGLARLHA 126
            ++ F++  CYFPI FTPPPNDP G+T E L+  LR  FAA D++AP VLP LL+KLAS   +AK DA +TL+     Y+  AL     AV  AL+ + + GEK++    ARQA +R    +AR  A
Sbjct:  238 QQYFDIVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARQAISRFSGVVARAKA 363          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: A0A2P4Y010_9STRA (MMS19 nucleotide excision repair protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y010_9STRA)

HSP 1 Score: 102 bits (253), Expect = 1.120e-22
Identity = 58/126 (46.03%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKED----ARQAAARVCTGLARLHA 126
            ++ F++  CYFPI FTPPPNDP G+T E L+  LR  FAA D++AP VLP LL+KLAS   +AK DA +TL+     Y+  AL     AV  AL+ + + GEK++    AR A +R    +AR  A
Sbjct:  647 QQYFDIVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHAVATALYDEVLDGEKQEVIAEARLAISRFSGVVARARA 772          
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Match: A0A662XHF0_9STRA (MMS19 nucleotide excision repair protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662XHF0_9STRA)

HSP 1 Score: 101 bits (251), Expect = 2.130e-22
Identity = 58/126 (46.03%), Postives = 78/126 (61.90%), Query Frame = 0
Query:    5 EELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAPFVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHHDAVHGEKED----ARQAAARVCTGLARLHA 126
            ++ F+V  CYFPI FTPPPNDP G+T E L+  LR  FAA D++AP VLP LL+KLAS   +AK DA +TL+     Y+  AL     A+  AL+ + + GEK++    AR A +R    +AR  A
Sbjct:  238 QQYFDVVSCYFPIIFTPPPNDPYGITSEGLILSLRHAFAASDLLAPLVLPFLLKKLASTVVEAKLDALQTLVFCGERYSVNALLLQMHALATALYDEVLDGEKQEVITEARLAVSRFAGIVARAKA 363          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124202.4928.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8K1CHX8_PYTOL1.230e-2546.67Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A5D6XS49_9STRA2.020e-2449.09MMS19 nucleotide excision repair protein n=1 Tax=P... [more]
A0A3M6VKJ3_9STRA7.010e-2446.83MMS19 nucleotide excision repair protein n=1 Tax=P... [more]
K3WEQ0_GLOUD9.530e-2446.43MMS19 nucleotide excision repair protein n=1 Tax=G... [more]
D0NXI8_PHYIT1.300e-2347.62MMS19 nucleotide excision repair protein n=10 Tax=... [more]
A0A3R7JFL1_9STRA1.320e-2347.62MMS19 nucleotide excision repair protein n=1 Tax=P... [more]
A0A421GLT5_9STRA1.320e-2347.62MMS19 nucleotide excision repair protein n=3 Tax=P... [more]
H3GFF5_PHYRM1.780e-2346.83MMS19 nucleotide excision repair protein n=22 Tax=... [more]
A0A2P4Y010_9STRA1.120e-2246.03MMS19 nucleotide excision repair protein (Fragment... [more]
A0A662XHF0_9STRA2.130e-2246.03MMS19 nucleotide excision repair protein n=2 Tax=N... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR029240MMS19, N-terminalPFAMPF14500MMS19_Ncoord: 3..102
e-value: 1.4E-33
score: 116.6
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 24..126
e-value: 3.0E-5
score: 25.6
IPR039920DNA repair/transcription protein MET18/MMS19PANTHERPTHR12891DNA REPAIR/TRANSCRIPTION PROTEIN MET18/MMS19coord: 3..123
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 46..123

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124202contigM-pyrifera_M_contig124202:143..520 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124202.4928.1mRNA_M-pyrifera_M_contig124202.4928.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124202 143..520 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124202.4928.1 ID=prot_M-pyrifera_M_contig124202.4928.1|Name=mRNA_M-pyrifera_M_contig124202.4928.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=126bp
MSAAEELFEVTGCYFPITFTPPPNDPNGVTKEDLVSRLRAVFAAGDVMAP
FVLPLLLEKLASARADAKRDAAETLLHVARAYTPAALTKYWPAVVDALHH
DAVHGEKEDARQAAARVCTGLARLHA
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR029240MMS19_N
IPR011989ARM-like
IPR039920MET18/MMS19
IPR016024ARM-type_fold