prot_M-pyrifera_M_contig124188.4922.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig124188.4922.1
Unique Nameprot_M-pyrifera_M_contig124188.4922.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length95
Homology
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BLAST of mRNA_M-pyrifera_M_contig124188.4922.1 vs. uniprot
Match: A0A7S1G944_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G944_9STRA)

HSP 1 Score: 73.9 bits (180), Expect = 2.560e-13
Identity = 38/96 (39.58%), Postives = 55/96 (57.29%), Query Frame = 0 
Query:    1 LCTDCPGGSYCTGGSSEPLAEAGFWRVNRTAFVECVPSSACLRD--NQCEEGYRGETCALCLVGSHYRNVWTRECTVCPAAASW--YLAGFVIGLL 92
            LC+ CP G  C GGS++P  + G+WR  R  F+ C P++AC     + C +GY G+ C LC    +YR    +EC  CP  A W  +LA F++ +L
Sbjct: 1282 LCSPCPVGGVCEGGSADPYPQPGYWRAKRDLFLSCTPTAACPGGVASPCADGYDGDACTLCA-DKYYRL--RQECLPCPDTA-WLMFLAFFLVLVL 1373
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig124188.4922.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A7S1G944_9STRA2.560e-1339.58Hypothetical protein (Fragment) n=1 Tax=Bicosoecid... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig124188contigM-pyrifera_M_contig124188:68..352 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig124188.4922.1mRNA_M-pyrifera_M_contig124188.4922.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig124188 68..352 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig124188.4922.1 ID=prot_M-pyrifera_M_contig124188.4922.1|Name=mRNA_M-pyrifera_M_contig124188.4922.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=95bp
LCTDCPGGSYCTGGSSEPLAEAGFWRVNRTAFVECVPSSACLRDNQCEEG
YRGETCALCLVGSHYRNVWTRECTVCPAAASWYLAGFVIGLLGVM
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