prot_M-pyrifera_M_contig123394.4787.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig123394.4787.1
Unique Nameprot_M-pyrifera_M_contig123394.4787.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length174
Homology
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A2E7KKI1_9PLAN (ABC transporter permease n=6 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KKI1_9PLAN)

HSP 1 Score: 338 bits (868), Expect = 3.310e-116
Identity = 173/174 (99.43%), Postives = 174/174 (100.00%), Query Frame = 0
Query:    1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
            LEDV+DVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ
Sbjct:    9 LEDVVDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 182          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A6I6AGH7_9PLAN (ABC transporter permease n=1 Tax=Gimesia benthica TaxID=2608982 RepID=A0A6I6AGH7_9PLAN)

HSP 1 Score: 305 bits (780), Expect = 8.210e-103
Identity = 153/174 (87.93%), Postives = 165/174 (94.83%), Query Frame = 0
Query:    1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
            LED++D+IKSS+LCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFN+ P+EYLPNLAAGYLFWTLIA  +SE+PTIFI+NAAYLKDMKINLL+FVFR+LARNTIIFLHNALFIMFV FYF IWP  QTLLV+PGL LVLLNLFWITLF GIVGARYRDLAPIIQ
Sbjct:    9 LEDMVDMIKSSQLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNVPPEEYLPNLAAGYLFWTLIAVVLSESPTIFIENAAYLKDMKINLLIFVFRSLARNTIIFLHNALFIMFVTFYFGIWPTWQTLLVLPGLILVLLNLFWITLFLGIVGARYRDLAPIIQ 182          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A518ABG4_9PLAN (ABC-2 type transporter n=2 Tax=Gimesia panareensis TaxID=2527978 RepID=A0A518ABG4_9PLAN)

HSP 1 Score: 293 bits (749), Expect = 4.270e-98
Identity = 144/174 (82.76%), Postives = 162/174 (93.10%), Query Frame = 0
Query:    1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
            LED+ID+IKSS+LC+FLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLF M P EYLPNLAAGYLFWT+I+  +SE+PT+FI+NAAYLKDMKINLLVF+FR+LARNTIIFLHNA+FI FV  YF+IWPQ   +LV+PG+ LVLLNLFWITLFFGI+GARYRDLAPIIQ
Sbjct:    9 LEDMIDMIKSSQLCLFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFKMPPGEYLPNLAAGYLFWTMISTMLSESPTVFIENAAYLKDMKINLLVFIFRSLARNTIIFLHNAIFIAFVSLYFQIWPQWPMILVVPGIALVLLNLFWITLFFGIIGARYRDLAPIIQ 182          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A517W3V7_9PLAN (ABC-2 type transporter n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517W3V7_9PLAN)

HSP 1 Score: 276 bits (705), Expect = 2.100e-91
Identity = 138/174 (79.31%), Postives = 151/174 (86.78%), Query Frame = 0
Query:    1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
            L D +DV KS RLC FLAWFDIRIRYRRSKIGPFWITISMAIFI+ALG VYSKLFNM  +EY+PNLAAGYLFWTL+A  +SE+PTIFI+N +YLKDMKINLLV V RAL RN IIFLHNA+FI  VC YF IWPQ Q L VIPG+FLVL+NLFWITL FGI+GARYRDLAPIIQ
Sbjct:    9 LNDFVDVFKSFRLCFFLAWFDIRIRYRRSKIGPFWITISMAIFIVALGAVYSKLFNMKAEEYMPNLAAGYLFWTLMATALSESPTIFIENGSYLKDMKINLLVLVVRALTRNFIIFLHNAVFIAGVCLYFGIWPQWQMLFVIPGVFLVLINLFWITLVFGILGARYRDLAPIIQ 182          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A517VJ44_9PLAN (ABC-2 type transporter n=1 Tax=Gimesia algae TaxID=2527971 RepID=A0A517VJ44_9PLAN)

HSP 1 Score: 256 bits (654), Expect = 1.180e-83
Identity = 126/174 (72.41%), Postives = 146/174 (83.91%), Query Frame = 0
Query:    1 LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
            L D++DV KSS+LC+FLAWFDIRIRYRRSK+GPFWITISMAIFIIALGVVYSKLF +   EYLPNLA GYLFWT+IA T+ E+PTIFI N +Y+KDMK+NLLV V RAL RN II LHNA+FI+ VC Y+ IWP  Q L +IPGL +VL+NLFWI L  GI+GAR+RDL PIIQ
Sbjct:    9 LNDIVDVFKSSQLCLFLAWFDIRIRYRRSKLGPFWITISMAIFIIALGVVYSKLFKVPAGEYLPNLAIGYLFWTMIATTLGESPTIFITNNSYIKDMKVNLLVLVVRALTRNFIILLHNAVFIVGVCLYYHIWPHWQMLALIPGLIIVLMNLFWIMLLLGILGARFRDLEPIIQ 182          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A1I7I769_9PROT (ABC-2 type transport system permease protein/lipopolysaccharide transport system permease protein n=1 Tax=Nitrosospira multiformis TaxID=1231 RepID=A0A1I7I769_9PROT)

HSP 1 Score: 177 bits (448), Expect = 2.140e-52
Identity = 90/173 (52.02%), Postives = 119/173 (68.79%), Query Frame = 0
Query:    2 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
             D+   +K+  + +FLAW DI++RYRRSKIGP WIT+SMAIF + LGVVYSKL      EYLP L+  ++ W LI++ + E P +++DNAAY+KD+ IN    +FR +ARN ++F HNAL I+ +  YF +WP    LL IPGL LVLLNL  I +   I GARYRD+A I Q
Sbjct:   14 SDLFAALKAYDIWLFLAWLDIKLRYRRSKIGPLWITLSMAIFCLTLGVVYSKLLKTDISEYLPFLSVSFVIWGLISSLLIEFPNLYVDNAAYIKDIHINFYTVLFRVVARNAVVFGHNALIILGIYIYFDLWPGFTFLLAIPGLGLVLLNLVSIGVILSIFGARYRDVAQINQ 186          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A4R6UV67_9GAMM (ABC-2 type transport system permease protein/lipopolysaccharide transport system permease protein n=1 Tax=Permianibacter aggregans TaxID=1510150 RepID=A0A4R6UV67_9GAMM)

HSP 1 Score: 175 bits (444), Expect = 6.820e-52
Identity = 88/173 (50.87%), Postives = 124/173 (71.68%), Query Frame = 0
Query:    2 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
            +D+   I+S  L  +L+W DIR+RYRRSKIGP WIT+SMA+F +ALG VYSKLFN    EYLP L+ GY+ W+ ++   +E P IF+D++AY KD+++N LV + RA +R TIIF HN + ++ + FYF ++P    L + P L LV+ NLF+I +   IVGAR+RD+API+Q
Sbjct:    6 KDISLAIRSYHLWGYLSWQDIRLRYRRSKIGPLWITLSMALFCLALGFVYSKLFNADLKEYLPFLSFGYIAWSFVSGLTTEMPNIFVDSSAYFKDIRLNPLVVIARAFSRATIIFAHNLIIVVGIWFYFDMFPGWNLLQIFPSLALVVCNLFFIGVCLAIVGARFRDIAPIVQ 178          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A7Z7HPN7_9PROT (Transport permease protein n=1 Tax=Sterolibacterium denitrificans TaxID=157592 RepID=A0A7Z7HPN7_9PROT)

HSP 1 Score: 174 bits (442), Expect = 2.040e-51
Identity = 89/173 (51.45%), Postives = 116/173 (67.05%), Query Frame = 0
Query:    2 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
             D++    +  L  FLAW DIRIRYRRS+IGPFWIT+S AIF +ALG+VY +LF     E LP L+ G + W+ ++  I E P +F++NA Y+KDM+IN L  + RA+ARN IIF HN L +  +  YF IWP    LL +PG+ LV+LNL  I +   IVGAR+RDLA I Q
Sbjct:   20 HDLLAAFMAYELWSFLAWQDIRIRYRRSRIGPFWITLSTAIFCVALGIVYGRLFKTEISELLPFLSIGMVVWSFVSTCIGEMPNLFVENAPYIKDMRINPLTILLRAIARNAIIFAHNLLIVAGIYLYFGIWPGWTGLLALPGMLLVMLNLLAIGVILSIVGARFRDLAQITQ 192          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: A0A257DA69_9BURK (ABC transporter permease n=1 Tax=Burkholderiales bacterium PBB1 TaxID=2015563 RepID=A0A257DA69_9BURK)

HSP 1 Score: 171 bits (434), Expect = 2.840e-50
Identity = 90/173 (52.02%), Postives = 117/173 (67.63%), Query Frame = 0
Query:    2 EDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
             D+ + I S  L  FLAW DIRI+YRRSKIGP W+T+SMAIF IALG+VYS+LF    +E LP LA G + W  ++  + E P +F+DNA Y++DM+IN L  + R+LARN IIF HN L ++ +  +F IWP    LL +PG  LV LNL  I +   IVGAR+RDL+ I Q
Sbjct:   15 NDLTEAISSYELWSFLAWQDIRIKYRRSKIGPMWLTLSMAIFCIALGMVYSQLFKTKIEELLPFLAIGLVVWGFLSNCLGEMPNLFVDNAPYIRDMRINPLSIILRSLARNIIIFGHNLLIVIGIYIFFGIWPGWGVLLALPGFLLVALNLLAIAIPLSIVGARFRDLSQITQ 187          
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Match: UPI000D272A79 (ABC transporter permease n=1 Tax=Methylomonas sp. TaxID=418 RepID=UPI000D272A79)

HSP 1 Score: 171 bits (432), Expect = 5.370e-50
Identity = 86/171 (50.29%), Postives = 118/171 (69.01%), Query Frame = 0
Query:    4 VIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVVYSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKINLLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLLNLFWITLFFGIVGARYRDLAPIIQ 174
            +ID +KS  + ++LAW DIR+RYRRS+IGPFWIT+SMAIF  +LGVVYS+LF     +YLP L+ G++ W  I+  ++E P +++DNAAY+KD+KIN    +FRA+ R  I  LHN L I+ +  YF I P    LL +PG  LV LNL  + +   + GAR+RD+API Q
Sbjct:   15 LIDALKSREIWLYLAWQDIRLRYRRSRIGPFWITLSMAIFCFSLGVVYSQLFKADITDYLPFLSVGFVIWGFISGMLTEFPNLYVDNAAYIKDIKINPFNIIFRAVTRQVITLLHNCLIIVGIYIYFGINPGFTALLALPGFILVALNLVALGVSLSLFGARFRDVAPITQ 185          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig123394.4787.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A2E7KKI1_9PLAN3.310e-11699.43ABC transporter permease n=6 Tax=Gimesia TaxID=164... [more]
A0A6I6AGH7_9PLAN8.210e-10387.93ABC transporter permease n=1 Tax=Gimesia benthica ... [more]
A0A518ABG4_9PLAN4.270e-9882.76ABC-2 type transporter n=2 Tax=Gimesia panareensis... [more]
A0A517W3V7_9PLAN2.100e-9179.31ABC-2 type transporter n=1 Tax=Gimesia aquarii Tax... [more]
A0A517VJ44_9PLAN1.180e-8372.41ABC-2 type transporter n=1 Tax=Gimesia algae TaxID... [more]
A0A1I7I769_9PROT2.140e-5252.02ABC-2 type transport system permease protein/lipop... [more]
A0A4R6UV67_9GAMM6.820e-5250.87ABC-2 type transport system permease protein/lipop... [more]
A0A7Z7HPN7_9PROT2.040e-5151.45Transport permease protein n=1 Tax=Sterolibacteriu... [more]
A0A257DA69_9BURK2.840e-5052.02ABC transporter permease n=1 Tax=Burkholderiales b... [more]
UPI000D272A795.370e-5050.29ABC transporter permease n=1 Tax=Methylomonas sp. ... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013525ABC-2 type transporterPFAMPF01061ABC2_membranecoord: 14..172
e-value: 1.0E-9
score: 38.1
NoneNo IPR availablePANTHERPTHR30413:SF10coord: 3..174
NoneNo IPR availablePANTHERPTHR30413INNER MEMBRANE TRANSPORT PERMEASEcoord: 3..174
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 165..174
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 32..51
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 134..138
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 139..164
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 114..133
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 71..93
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 52..70
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..31
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 94..113
NoneNo IPR availableTMHMMTMhelixcoord: 66..88
NoneNo IPR availableTMHMMTMhelixcoord: 108..130
NoneNo IPR availableTMHMMTMhelixcoord: 140..162
NoneNo IPR availableTMHMMTMhelixcoord: 32..51

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig123394contigM-pyrifera_M_contig123394:1..522 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig123394.4787.1mRNA_M-pyrifera_M_contig123394.4787.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig123394 1..522 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig123394.4787.1 ID=prot_M-pyrifera_M_contig123394.4787.1|Name=mRNA_M-pyrifera_M_contig123394.4787.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=174bp
LEDVIDVIKSSRLCMFLAWFDIRIRYRRSKIGPFWITISMAIFIIALGVV
YSKLFNMAPDEYLPNLAAGYLFWTLIAATISEAPTIFIDNAAYLKDMKIN
LLVFVFRALARNTIIFLHNALFIMFVCFYFKIWPQLQTLLVIPGLFLVLL
NLFWITLFFGIVGARYRDLAPIIQ
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013525ABC_2_trans