prot_M-pyrifera_M_contig122828.4690.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122828.4690.1
Unique Nameprot_M-pyrifera_M_contig122828.4690.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length146
Homology
BLAST of mRNA_M-pyrifera_M_contig122828.4690.1 vs. uniprot
Match: A0A5A8E8U3_CAFRO (Protein HGH1 homolog n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8E8U3_CAFRO)

HSP 1 Score: 125 bits (315), Expect = 4.600e-31
Identity = 72/142 (50.70%), Postives = 96/142 (67.61%), Query Frame = 0
Query:    6 STVKDLVGFLLDSRKEVRGLAARNVAALTGNAGDRALLQRAEAAGPLVRLIGDSEPVVGSYAVRALVNLSAEPGFQGQILALRVVNRVMEAIQRDACPFRGLAVMFLSNLCATPAGCMQLLQKDEHG-GRLVGLHLRQLLRL 146
            +T+ +LVGF+  +R +VR +A  +V  +     +   L+ A+AA  L RL+GD  P V S AV+ L+NLSA+  FQ Q+L LR+VN VMEA++ DAC FR   VM LSNLC T AGC+QL+QKDE   G  VG+HLR+LL L
Sbjct:    7 ATMSELVGFMTHARVDVRMVAVTHVLQVAAEPANWPGLKEAKAAPALARLVGD-HPKVASVAVQCLINLSADSEFQAQMLKLRLVNSVMEALKDDACSFRRHGVMLLSNLCQTQAGCLQLMQKDERSDGSTVGVHLRRLLAL 147          
BLAST of mRNA_M-pyrifera_M_contig122828.4690.1 vs. uniprot
Match: A0A812QMA0_9DINO (Protein HGH1 homolog n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812QMA0_9DINO)

HSP 1 Score: 106 bits (264), Expect = 5.900e-24
Identity = 64/142 (45.07%), Postives = 91/142 (64.08%), Query Frame = 0
Query:    6 STVKDLVGFLLDSRKEVRGLAARNVAALTGNAGDRALLQRAEAAGPLVRLIGDSEPVVGSYAVRALVNLSAEPGFQGQILALRVVNRVMEAIQRDACPFRGLAVMFLSNLCATPAGCMQLLQKDEHGGR--LVGLHLRQLLR 145
            S V++LV FL D+R EVRGL A+N+   TG+   +  L+ A+A   L RLIGD  P+    A++AL+N   +     Q+LA+R+++ +ME+++    PF+ LAVM LSNLC T  GC+QLLQ+D  G    L GLH R LL+
Sbjct:    3 SQVEELVAFLGDTRPEVRGLVAKNILQYTGDETMKTQLRAAKAPRKLCRLIGDLAPIA-EPALKALINFCDDSAALQQMLAVRLIDSLMESLRGKDFPFKRLAVMLLSNLCQTMEGCIQLLQQDVTGAAAGLRGLHFRLLLQ 143          
BLAST of mRNA_M-pyrifera_M_contig122828.4690.1 vs. uniprot
Match: A0A8J4EU88_9CHLO (DUF383 domain-containing protein n=2 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4EU88_9CHLO)

HSP 1 Score: 65.9 bits (159), Expect = 7.530e-10
Identity = 53/144 (36.81%), Postives = 77/144 (53.47%), Query Frame = 0
Query:    6 STVKDLVGFLLDSRKEVRGLAARNVAALTGNAGDRALLQRAEAAGPLVRLIGDSEPVVGSYAVR----ALVNLSAEPGFQGQILALRVVNRVMEAIQRDACPFRGLAVMFLSNLCATPAGCMQLLQKDEHGGRLVGLHLRQLLR 145
            S + +L+GFL DSR E+R ++A  VA LT NA     L+  +   PL+  +     V+G  AVR    ALVNLS EP     +L   V+N+VME+I+    P   L    L+N+  +  G  +LLQ  +  G + G H+  LL+
Sbjct:    4 SDLGELIGFLEDSRDEIRAMSAEIVAGLTANAEGMEKLKCVQR--PLIIKLLQCV-VLGGDAVRKALVALVNLSHEPAVVEILLDSNVINQVMESIRDRTTPHVDLLTSLLANITISERGSKELLQLGK--GSMEGHHMAVLLK 142          
BLAST of mRNA_M-pyrifera_M_contig122828.4690.1 vs. uniprot
Match: A0A8J4BXY2_9CHLO (DUF383 domain-containing protein n=1 Tax=Volvox reticuliferus TaxID=1737510 RepID=A0A8J4BXY2_9CHLO)

HSP 1 Score: 65.1 bits (157), Expect = 1.410e-9
Identity = 53/146 (36.30%), Postives = 76/146 (52.05%), Query Frame = 0
Query:    6 STVKDLVGFLLDSRKEVRGLAARNVAALTGNAGDRALLQRAEA--AGPLVRLIGDSEPVVGSYAVR----ALVNLSAEPGFQGQILALRVVNRVMEAIQRDACPFRGLAVMFLSNLCATPAGCMQLLQKDEHGGRLVGLHLRQLLR 145
            S + +L+GFL DSR E+R ++A  VA LT NA     L+  +   A  L + +G     +G  AVR    ALVNLS +P     +L L  +NRVM+ I+    P   L    L+N+  +  G   LLQ  +  G + GLH+  LL+
Sbjct:    4 SDLGELIGFLDDSRNEIRAMSAEIVAGLTANAEGMEKLKCVQRPLAIKLFQCVG-----MGGDAVRKALVALVNLSHDPAVVEMLLDLNAINRVMDFIRDRIVPHVDLLTGLLANMTISERGSKDLLQIGK--GSMEGLHMAVLLK 142          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122828.4690.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 4
Match NameE-valueIdentityDescription
A0A5A8E8U3_CAFRO4.600e-3150.70Protein HGH1 homolog n=4 Tax=Cafeteria roenbergens... [more]
A0A812QMA0_9DINO5.900e-2445.07Protein HGH1 homolog n=1 Tax=Symbiodinium sp. KB8 ... [more]
A0A8J4EU88_9CHLO7.530e-1036.81DUF383 domain-containing protein n=2 Tax=Volvox af... [more]
A0A8J4BXY2_9CHLO1.410e-936.30DUF383 domain-containing protein n=1 Tax=Volvox re... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR011989Armadillo-like helicalGENE3D1.25.10.10coord: 2..143
e-value: 1.6E-11
score: 46.0
IPR039717Protein Hgh1PANTHERPTHR13387FAMILY NOT NAMEDcoord: 9..133
IPR016024Armadillo-type foldSUPERFAMILY48371ARM repeatcoord: 8..127

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122828contigM-pyrifera_M_contig122828:1..438 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122828.4690.1mRNA_M-pyrifera_M_contig122828.4690.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122828 1..438 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122828.4690.1 ID=prot_M-pyrifera_M_contig122828.4690.1|Name=mRNA_M-pyrifera_M_contig122828.4690.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=146bp
ATQEYSTVKDLVGFLLDSRKEVRGLAARNVAALTGNAGDRALLQRAEAAG
PLVRLIGDSEPVVGSYAVRALVNLSAEPGFQGQILALRVVNRVMEAIQRD
ACPFRGLAVMFLSNLCATPAGCMQLLQKDEHGGRLVGLHLRQLLRL
back to top
Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR011989ARM-like
IPR039717Hgh1
IPR016024ARM-type_fold