prot_M-pyrifera_M_contig122826.4689.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122826.4689.1
Unique Nameprot_M-pyrifera_M_contig122826.4689.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length173
Homology
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: A0A3C0HSZ5_9ACTN (NAD(P)-dependent oxidoreductase n=3 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A3C0HSZ5_9ACTN)

HSP 1 Score: 191 bits (486), Expect = 1.030e-57
Identity = 96/165 (58.18%), Postives = 118/165 (71.52%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALPSVPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAAGHSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPPTLLAVDDEPAPRDDVIRFLAEQL 165
            VVFTTAPP RD + YR AY++GP R+L ALP+ P R VLTSTTGV+G  DG WV  +T P P+R+TAA+V+EGE  L     + VVR AGIYGPGR RLID+V  G   V     ARWTNR+HRDDL  A+ +  +H   PP  +AVDDEPAPRDDV+ ++AEQ+
Sbjct:   91 VVFTTAPPSRDDEGYRTAYLDGPQRLLDALPTEPARAVLTSTTGVYGADDGRWVTATTPPDPSRSTAAIVVEGEAALARRIPTTVVRSAGIYGPGRRRLIDQVLTGVVGVTPGMPARWTNRVHRDDLAAALALCVVHPSPPPVAIAVDDEPAPRDDVLAWIAEQV 255          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: A0A2E8L9K7_9ACTN (NAD(P)-dependent oxidoreductase n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A2E8L9K7_9ACTN)

HSP 1 Score: 185 bits (470), Expect = 1.310e-55
Identity = 92/165 (55.76%), Postives = 115/165 (69.70%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALPSVPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAAGHSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPPTLLAVDDEPAPRDDVIRFLAEQL 165
            VVFTTAPP RD   YR+AY++GP R+L  LP+ P R VLTSTTGV+G  DG WV  +T P PTR+TA +V++GE  L     + VVR AGIYGPGR RLID+V  G   V      RWTNR+HRDDL  A+ + ++H   PP  +AVDDEPAPRD V+ ++AEQ+
Sbjct:   66 VVFTTAPPSRDDQGYRIAYLDGPQRLLDGLPAEPTRAVLTSTTGVYGADDGRWVTATTPPDPTRSTAEIVVDGEVALAHRIPTTVVRSAGIYGPGRRRLIDQVLTGAVGVTPGMPTRWTNRVHRDDLAAALALCAVHPSPPPVAIAVDDEPAPRDGVLTWIAEQV 230          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: A0A358A3W8_9ACTN (NAD(P)-dependent oxidoreductase (Fragment) n=2 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A358A3W8_9ACTN)

HSP 1 Score: 157 bits (396), Expect = 2.640e-45
Identity = 78/142 (54.93%), Postives = 97/142 (68.31%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALPSVPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAAGHSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPP 142
            VVFTTAPP RD   YR+AY++GP R+L ALP+ P R VLTSTTGV+G  DG WV  +T P P R+TA +V+EGE  L     + +VR AGIYGPGR RLID+V  G   V     ARW+NR+HRDDL  A+ + ++H   PP
Sbjct:   66 VVFTTAPPSRDDQGYRIAYLDGPQRLLDALPTEPTRAVLTSTTGVYGADDGRWVTAATPPDPPRSTAEIVVEGESALARRIPTTIVRSAGIYGPGRRRLIDQVLTGVVGVTPGMPARWSNRVHRDDLAAALALCAVHPSPPP 207          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: UPI000479E5B3 (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Arthrobacter sp. H14 TaxID=1312959 RepID=UPI000479E5B3)

HSP 1 Score: 145 bits (367), Expect = 4.530e-40
Identity = 86/175 (49.14%), Postives = 114/175 (65.14%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALP---SVPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAAGHS-VVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAP-PTLLAVDDEPAPRDDVIRFLAEQLGAPTP 170
            VV  T+  GR  DAYR AYV+  + +L AL    + P++++L S+T V+G  DGSWVDESTEP P   TA ++LE E LL A   S VV+R  GIYGPGR+RLID++R G   +    T ++TNRIHRDD   A++  +  ++AP P  L VD+EPA + DV  FLA +LG P P
Sbjct:   61 VVMATSADGRTEDAYRSAYVDSLNNLLDALAQSGAKPYKVLLISSTAVYGVDDGSWVDESTEPEPASGTAEILLEAERLLHARLPSAVVLRLGGIYGPGRARLIDQIRNGTAEIPL--TPQYTNRIHRDDAAAAVVHLTTAVDAPAPVYLGVDNEPAAQGDVFGFLAVELGMPHP 233          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: A0A7Y4MHT8_9MICC (SDR family oxidoreductase n=5 Tax=Arthrobacter TaxID=1663 RepID=A0A7Y4MHT8_9MICC)

HSP 1 Score: 142 bits (358), Expect = 1.380e-38
Identity = 82/175 (46.86%), Postives = 111/175 (63.43%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALP--SVPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAAG-HSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPPTL-LAVDDEPAPRDDVIRFLAEQLGAPTPP 171
            VV  TA  GR  DAYR AY+E    VL AL    +  R++L S+T V+G  DG W+DES   AP  ATA ++   EELLRA    ++++R +GIYGPGR+RLID++ AG   V  +   +WTNRIHRDD   A++  +  +  P T+ + VD+EP  + +V+ FLA QLG PTPP
Sbjct:   69 VVVATAADGRTEDAYRAAYLEATGNVLDALDRDGIDARILLVSSTAVYGGDDGEWIDESHPVAPATATATILASTEELLRARRPDAIILRLSGIYGPGRTRLIDQLTAGTAVVPQE--IQWTNRIHRDDAAAAIVHLTTQVGDPGTVYIGVDNEPVDQGEVVEFLAAQLGLPTPP 241          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: A0A661NQA3_9DELT (SDR family NAD(P)-dependent oxidoreductase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A661NQA3_9DELT)

HSP 1 Score: 141 bits (355), Expect = 4.480e-38
Identity = 88/177 (49.72%), Postives = 112/177 (63.28%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALPS---VPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAAGH--SVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPP-TLLAVDDEPAPRDDVIRFLAEQLGAPTPP 171
            VV TTAP G D + YR AYVEGP  +L+ L        R++LT++TGV+    G WVDE +   PT  +   +LEGE ++ AAG   SV VR AGIYGPGR+RLID+V++G+    T   + WTNRIHRDD    +L A L L+APP  ++ VD EPA  DDV RFLA +L    PP
Sbjct:   67 VVITTAPGGGDDERYRQAYVEGPQNLLSFLRGRGDPVKRVLLTTSTGVYAQTGGDWVDERSPTEPTHFSGKRMLEGEAVI-AAGEFESVAVRLAGIYGPGRTRLIDRVKSGE--ARTPRQSLWTNRIHRDDCA-GLLEALLDLDAPPRVVIGVDQEPAELDDVQRFLAAELSVAVPP 239          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: A0A512IC28_9MICC (Epimerase domain-containing protein n=15 Tax=Kocuria TaxID=57493 RepID=A0A512IC28_9MICC)

HSP 1 Score: 139 bits (351), Expect = 1.180e-37
Identity = 86/179 (48.04%), Postives = 108/179 (60.34%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRV---LAALPSVPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAA-GHSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPPTLL--AVDDEPAPRDDVIRFLAEQLGAPTPPTV 173
            +V  TA  GR  +AYR AY++G   +   L A  ++P R +L S+T V G ADG+ V E   PAP   TA ++LE EEL      H  V+R +GIYGPGR+RLIDKVR+GD A      A WTNRIHRDD   A  +  L +EA P  L    DDEP P  +V+ FLA++LGAP P  V
Sbjct:   64 LVVATAADGRTPEAYRAAYLDGLRHLFDGLRAAGALPRRALLVSSTAVCGDADGAEVTEDDPPAPATPTAQILLEAEELFHEQFPHGTVLRLSGIYGPGRTRLIDKVRSGDTAAG----AAWTNRIHRDDAAAAA-VHLLTMEAQPLTLYLGTDDEPVPEREVLEFLAQELGAPLPEDV 237          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: A0A651G915_9ACTN (NAD-dependent epimerase/dehydratase family protein n=1 Tax=Nitriliruptor sp. TaxID=2448056 RepID=A0A651G915_9ACTN)

HSP 1 Score: 139 bits (350), Expect = 1.580e-37
Identity = 88/176 (50.00%), Postives = 109/176 (61.93%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALPSV---PHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELL-RAAGHSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAML-IASLHLEAPPTLLAVDDEPAPRDDVIRFLAEQLGAPTPP 171
            VVFTTA   RD DAYR AYV    RVL AL +    P R++ TS+T V+G  DGS VDE T   PT AT AV++E E  L +    +V +R AG+YGPGR+RL+D+VR G  A+  +     TNRIHRDD   A+L +A L        L VDDEPAP  +V+ FLA +LG P PP
Sbjct:   61 VVFTTAADRRDVDAYRRAYVTATGRVLDALEAAGAAPRRVLFTSSTAVYGVDDGSEVDEDTPTGPTSATGAVLVEAERALWQRRPDAVSLRLAGVYGPGRTRLVDQVRDG-RALRPEREVH-TNRIHRDDAAAALLHLAGLPSSPATCYLGVDDEPAPLGEVLAFLAAELGLPPPP 234          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: UPI001668497B (SDR family oxidoreductase n=1 Tax=Kocuria dechangensis TaxID=1176249 RepID=UPI001668497B)

HSP 1 Score: 139 bits (350), Expect = 1.580e-37
Identity = 85/177 (48.02%), Postives = 106/177 (59.89%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAAL---PSVPHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAA-GHSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPPTLL--AVDDEPAPRDDVIRFLAEQLGAPTPP 171
            +V  TA  GR  + YR AYV+G   +L  +    S+P R VL S+T V    DG WV E T  AP+  TA V+LE EE+      H  V+R +GIYGPGR+RLIDK R+G    +T G A WTNRIHRDD   A+ +  L +EA P  L    DDEPAP  +V+ FLA +LG P PP
Sbjct:   61 LVVATAADGRSPEDYRAAYVDGLRNLLTGVLEAGSLPRRAVLISSTAVCANPDGEWVTEDTPVAPSTDTARVLLEAEEIFHEHFPHGTVLRLSGIYGPGRTRLIDKARSG----STQGGAAWTNRIHRDDAAAAV-VHLLTMEAQPLTLYLGTDDEPAPEREVLEFLAGELGLPLPP 232          
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Match: UPI000CE513BD (SDR family oxidoreductase n=5 Tax=Arthrobacter TaxID=1663 RepID=UPI000CE513BD)

HSP 1 Score: 139 bits (349), Expect = 2.460e-37
Identity = 87/175 (49.71%), Postives = 107/175 (61.14%), Query Frame = 0
Query:    1 VVFTTAPPGRDADAYRLAYVEGPSRVLAALPSV---PHRLVLTSTTGVFGTADGSWVDESTEPAPTRATAAVVLEGEELLRAAG-HSVVVRPAGIYGPGRSRLIDKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAP-PTLLAVDDEPAPRDDVIRFLAEQLGAPTP 170
            VV   A   R  DAYR AYV+G + VL AL      P R++  S+T V+G A G+WVDE+T  AP  AT AV+LE EELL +    +VV+R +GIYGPGR+RLID V AG  AV      + TNRIHRDD   A++       AP P  + VDDEPA   DV+RFLA +LG   P
Sbjct:   64 VVIAVAAGRRSEDAYRAAYVDGTANVLDALERDGVHPQRILFVSSTAVYGDAGGAWVDENTPAAPPSATGAVILEAEELLHSRRPDAVVLRLSGIYGPGRTRLIDSVTAGTAAVPA--ARQLTNRIHRDDAAAAIVHLMTREPAPEPLYVGVDDEPADLADVLRFLATELGRDLP 236          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122826.4689.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3C0HSZ5_9ACTN1.030e-5758.18NAD(P)-dependent oxidoreductase n=3 Tax=Acidimicro... [more]
A0A2E8L9K7_9ACTN1.310e-5555.76NAD(P)-dependent oxidoreductase n=1 Tax=Acidimicro... [more]
A0A358A3W8_9ACTN2.640e-4554.93NAD(P)-dependent oxidoreductase (Fragment) n=2 Tax... [more]
UPI000479E5B34.530e-4049.14NAD-dependent epimerase/dehydratase family protein... [more]
A0A7Y4MHT8_9MICC1.380e-3846.86SDR family oxidoreductase n=5 Tax=Arthrobacter Tax... [more]
A0A661NQA3_9DELT4.480e-3849.72SDR family NAD(P)-dependent oxidoreductase n=1 Tax... [more]
A0A512IC28_9MICC1.180e-3748.04Epimerase domain-containing protein n=15 Tax=Kocur... [more]
A0A651G915_9ACTN1.580e-3750.00NAD-dependent epimerase/dehydratase family protein... [more]
UPI001668497B1.580e-3748.02SDR family oxidoreductase n=1 Tax=Kocuria dechange... [more]
UPI000CE513BD2.460e-3749.71SDR family oxidoreductase n=5 Tax=Arthrobacter Tax... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR001509NAD-dependent epimerase/dehydratasePFAMPF01370Epimerasecoord: 19..140
e-value: 1.8E-5
score: 24.4
NoneNo IPR availableGENE3D3.40.50.720coord: 1..173
e-value: 1.8E-49
score: 170.8
NoneNo IPR availablePANTHERPTHR43574:SF6coord: 40..166
NoneNo IPR availablePANTHERPTHR43574FAMILY NOT NAMEDcoord: 40..166
IPR036291NAD(P)-binding domain superfamilySUPERFAMILY51735NAD(P)-binding Rossmann-fold domainscoord: 8..171

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122826contigM-pyrifera_M_contig122826:8..526 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122826.4689.1mRNA_M-pyrifera_M_contig122826.4689.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122826 8..526 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122826.4689.1 ID=prot_M-pyrifera_M_contig122826.4689.1|Name=mRNA_M-pyrifera_M_contig122826.4689.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=173bp
VVFTTAPPGRDADAYRLAYVEGPSRVLAALPSVPHRLVLTSTTGVFGTAD
GSWVDESTEPAPTRATAAVVLEGEELLRAAGHSVVVRPAGIYGPGRSRLI
DKVRAGDEAVATDGTARWTNRIHRDDLVEAMLIASLHLEAPPTLLAVDDE
PAPRDDVIRFLAEQLGAPTPPTV
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR001509Epimerase_deHydtase
IPR036291NAD(P)-bd_dom_sf