prot_M-pyrifera_M_contig122417.4622.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122417.4622.1
Unique Nameprot_M-pyrifera_M_contig122417.4622.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length155
Homology
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A5A8CPU7_CAFRO (Protein YIPF n=2 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CPU7_CAFRO)

HSP 1 Score: 145 bits (365), Expect = 5.330e-40
Identity = 81/154 (52.60%), Postives = 106/154 (68.83%), Query Frame = 0
Query:    1 MLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            ++A+++P S    E +++ D+ G IL+CL LG  LLL G+V FG IYGFGLVGC+ +  + NL+S  T  GI   +V SVFGY LLPIT LAAL ++  L   LG V+A   VAW+ + AT F++AAL    +R L+AYPT LLYAVFALLAVF
Sbjct:  135 LVAIVDPRSRVNMEAVQDGDLFGPILICLALGTTLLLRGQVHFGSIYGFGLVGCLGMYLVLNLMS--TGRGIDAASVFSVFGYGLLPITVLAALSVVLPLSGALGVVVAPVCVAWSAWCATRFYEAALAMPEQRALIAYPTVLLYAVFALLAVF 286          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: B7QHK6_IXOSC (Golgi membrane protein sb140, putative n=4 Tax=Ixodes TaxID=6944 RepID=B7QHK6_IXOSC)

HSP 1 Score: 137 bits (345), Expect = 2.900e-37
Identity = 77/153 (50.33%), Postives = 99/153 (64.71%), Query Frame = 0
Query:    2 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            +AV+NP+      +L+ESDMAG ++ CL  G  LLLTGKV FGYIYG GL+GC+A+ ++ NL+S   + GIS    VSV GYCLLP+  L+ L ILF L   LG  LALA V W   +A+  F  AL    ++ LL YP  L+Y VFALL +F
Sbjct:  113 VAVLNPIKDPDAAILKESDMAGPLVFCLAFGGFLLLTGKVHFGYIYGIGLLGCLAMYSLLNLMS---ANGISAGCTVSVLGYCLLPMVLLSGLSILFSLKGSLGTALALAVVLWCALSASKLFVTALSMDHQQPLLLYPCSLVYGVFALLTIF 262          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A7S0DM30_9EUKA (Protein YIPF n=1 Tax=Amorphochlora amoebiformis TaxID=1561963 RepID=A0A7S0DM30_9EUKA)

HSP 1 Score: 134 bits (338), Expect = 3.450e-37
Identity = 74/153 (48.37%), Postives = 97/153 (63.40%), Query Frame = 0
Query:    2 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            LAV+ P+   K+E++ ++DMAG +  CL LGF LLLTGKV FGYIYGFGL+GC+ +  I NL+S      I I    S+ GYCLLPI +LAA  I+F L   +G       + W T  AT F +A L  + +R L+AYP  LLY+ FAL+ VF
Sbjct:   30 LAVLVPVKELKQEIMVDADMAGPLFFCLLLGFCLLLTGKVHFGYIYGFGLIGCLGMYIILNLMS---DRSIDIYRTASILGYCLLPIVSLAAASIVFNLKGYIGFSTTTVTILWCTVAATRFVEATLDMRPQRYLVAYPLMLLYSCFALITVF 179          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A0C9S173_AMBAM (Putative golgi membrane protein (Fragment) n=1 Tax=Amblyomma americanum TaxID=6943 RepID=A0A0C9S173_AMBAM)

HSP 1 Score: 134 bits (337), Expect = 4.100e-37
Identity = 73/153 (47.71%), Postives = 100/153 (65.36%), Query Frame = 0
Query:    2 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            LAV+NP+      +L+E+D+AG ++ CL  G  LLLTGKV FGYIYG G++GC+A+ ++ NL+S   + GIS+   VSV GYCLLP+  L+ L ILF L   LG  +ALA V W   +A+  F  AL    ++ L+ YP  L+Y VFALL +F
Sbjct:   24 LAVLNPMKDPDAAILQETDLAGPLVFCLAFGGFLLLTGKVHFGYIYGIGVLGCLAMYSLLNLMS---ASGISVGCTVSVLGYCLLPMVLLSGLSILFSLKGSLGTAVALAVVVWCALSASKLFVTALSMVHQQPLVLYPCALVYGVFALLTIF 173          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A812NM95_9DINO (Protein YIPF n=1 Tax=Symbiodinium sp. KB8 TaxID=230985 RepID=A0A812NM95_9DINO)

HSP 1 Score: 136 bits (343), Expect = 6.230e-37
Identity = 79/168 (47.02%), Postives = 103/168 (61.31%), Query Frame = 0
Query:    2 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLL-----------TGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPG----ISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            L V+NP+    E  +++SD+AG ++ CL LGF LL            TGKV FGYIY FGL+GC AL T+ NL+S          I    V+SVFGYCLLPI  +A L +   +   LG++L L AV W+TY+A  FF+A  H +  R LLAYP+FLL+A FAL+ VF
Sbjct:   98 LEVLNPMRPINESFMQDSDLAGPLVFCLVLGFCLLFVRAAAAQRARPTGKVHFGYIYSFGLLGCGALWTVLNLMSSTAHDSDHIPIGFTRVLSVFGYCLLPIILIAVLTVFVTMTGILGSILTLGAVGWSTYSAVRFFEATTHMREHRWLLAYPSFLLFACFALITVF 265          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A226EG30_FOLCA (Protein YIPF5 n=1 Tax=Folsomia candida TaxID=158441 RepID=A0A226EG30_FOLCA)

HSP 1 Score: 135 bits (340), Expect = 2.350e-36
Identity = 69/152 (45.39%), Postives = 106/152 (69.74%), Query Frame = 0
Query:    3 AVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            +V+NPL      +L+++D+AG ++ C+  GF+LLL+GKVQFGYIYG G++GC+++  + N++S   + G+S+  VVSV GYCLLP+  LA + +LF L   +G+VL   A+ W + +A+  F  AL+   ++ L+AYP  L+Y VFALLAVF
Sbjct:  129 SVLNPLRKTDATILQDTDLAGPVVFCVLFGFILLLSGKVQFGYIYGIGVIGCLSMYFLLNMMS---TAGVSLGIVVSVLGYCLLPMVGLAGVNLLFSLQGIVGSVLTFCAILWCSMSASKLFVTALNMNQQQPLVAYPCALVYGVFALLAVF 277          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A7R9A4E5_9CRUS (Hypothetical protein n=1 Tax=Darwinula stevensoni TaxID=69355 RepID=A0A7R9A4E5_9CRUS)

HSP 1 Score: 133 bits (334), Expect = 3.310e-36
Identity = 71/153 (46.41%), Postives = 101/153 (66.01%), Query Frame = 0
Query:    2 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            LAV+NP+   K E+L+++D+AG +  CL LG  LLL GKV FGYIYG G+VGC+ +  + N++S     G+SI   VSV GYCLLP+  ++ L ++F L   +G V  L +V W +++A+  F  AL    ++ L+AYP  LLY VFALL+VF
Sbjct:   61 LAVLNPMKQTKPEILQDTDLAGPLAFCLALGAFLLLNGKVHFGYIYGIGVVGCLGMYFLLNMMS---MDGVSIGVTVSVLGYCLLPMVGVSGLAVIFTLKGGIGLVATLLSVFWCSWSASKLFVTALAMDHQQPLVAYPCALLYGVFALLSVF 210          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A1D2NC38_ORCCI (Protein YIPF5 n=1 Tax=Orchesella cincta TaxID=48709 RepID=A0A1D2NC38_ORCCI)

HSP 1 Score: 134 bits (338), Expect = 3.760e-36
Identity = 71/152 (46.71%), Postives = 103/152 (67.76%), Query Frame = 0
Query:    3 AVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            +V+NPL      +L+++D+AG I+ C+  GF+LLL+GKVQFGYIYG GL+GC+ +  + N++S     G+S+  +VSV GYCLLP+  LA + +L  L   +G VL   AV W + +A+  F  AL  + ++TL+AYP  L+Y VFALLAVF
Sbjct:  120 SVLNPLRTTDAAILQDTDLAGPIVFCVMFGFILLLSGKVQFGYIYGIGLIGCVGMYFLLNMMSVS---GVSLGVIVSVLGYCLLPMVGLAGVNLLLSLQGIIGTVLTALAVLWCSLSASKLFVTALAMQHQQTLVAYPCALVYGVFALLAVF 268          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: UPI000BA80CDC (protein YIPF5-like n=1 Tax=Limulus polyphemus TaxID=6850 RepID=UPI000BA80CDC)

HSP 1 Score: 134 bits (337), Expect = 7.100e-36
Identity = 71/153 (46.41%), Postives = 100/153 (65.36%), Query Frame = 0
Query:    2 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            LAV+NP+   +  +L+E+D+AG ++ C+  G  LLLTGKV FGYIYG G++GC+A+  + N++S     GIS+   VSV GYCLLP+  L+ + I+F L   LG V+A+  V W   +A+  F  AL    ++ L+AYP  LLY VFALL VF
Sbjct:  131 LAVLNPIKEPEASILQETDLAGPLVFCMAFGVFLLLTGKVHFGYIYGIGVLGCLAMYALLNMMS---MSGISVGCTVSVLGYCLLPMVMLSGVSIIFSLKGTLGTVIAILVVLWCALSASKLFATALVMDHQQPLVAYPCALLYGVFALLTVF 280          
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Match: A0A023FUW6_AMBPA (Putative rab gtpase n=11 Tax=Ixodidae TaxID=6939 RepID=A0A023FUW6_AMBPA)

HSP 1 Score: 133 bits (334), Expect = 1.260e-35
Identity = 72/153 (47.06%), Postives = 100/153 (65.36%), Query Frame = 0
Query:    2 LAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFGLVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFELHSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFALLAVF 154
            +AV+NP+      +L+E+D+AG ++ CL  G  LLLTGKV FGYIYG G++GC+A+ ++ NL+S   + GIS+   VSV GYCLLP+  L+ L ILF L   LG  +ALA V W   +A+  F  AL    ++ L+ YP  L+Y VFALL +F
Sbjct:  112 VAVLNPMKDPDAAILQETDLAGPLVFCLAFGGFLLLTGKVHFGYIYGIGVLGCLAMYSLLNLMS---ASGISVGCTVSVLGYCLLPMVLLSGLSILFSLKGSLGTAVALAVVVWCALSASKLFVTALSMVHQQPLVLYPCALVYGVFALLTIF 261          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122417.4622.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A5A8CPU7_CAFRO5.330e-4052.60Protein YIPF n=2 Tax=Cafeteria roenbergensis TaxID... [more]
B7QHK6_IXOSC2.900e-3750.33Golgi membrane protein sb140, putative n=4 Tax=Ixo... [more]
A0A7S0DM30_9EUKA3.450e-3748.37Protein YIPF n=1 Tax=Amorphochlora amoebiformis Ta... [more]
A0A0C9S173_AMBAM4.100e-3747.71Putative golgi membrane protein (Fragment) n=1 Tax... [more]
A0A812NM95_9DINO6.230e-3747.02Protein YIPF n=1 Tax=Symbiodinium sp. KB8 TaxID=23... [more]
A0A226EG30_FOLCA2.350e-3645.39Protein YIPF5 n=1 Tax=Folsomia candida TaxID=15844... [more]
A0A7R9A4E5_9CRUS3.310e-3646.41Hypothetical protein n=1 Tax=Darwinula stevensoni ... [more]
A0A1D2NC38_ORCCI3.760e-3646.71Protein YIPF5 n=1 Tax=Orchesella cincta TaxID=4870... [more]
UPI000BA80CDC7.100e-3646.41protein YIPF5-like n=1 Tax=Limulus polyphemus TaxI... [more]
A0A023FUW6_AMBPA1.260e-3547.06Putative rab gtpase n=11 Tax=Ixodidae TaxID=6939 R... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR006977Yip1 domainPFAMPF04893Yip1coord: 13..144
e-value: 9.2E-9
score: 35.2
NoneNo IPR availablePANTHERPTHR21236GOLGI MEMBRANE PROTEIN YIP1coord: 1..154
NoneNo IPR availablePANTHERPTHR21236:SF2PROTEIN YIPFcoord: 1..154
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..20
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 154..154
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 104..124
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 125..135
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 65..75
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 21..39
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 76..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 136..153
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 40..44
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 45..64
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 99..103
NoneNo IPR availableTMHMMTMhelixcoord: 42..64
NoneNo IPR availableTMHMMTMhelixcoord: 102..124
NoneNo IPR availableTMHMMTMhelixcoord: 76..98
NoneNo IPR availableTMHMMTMhelixcoord: 136..153
NoneNo IPR availableTMHMMTMhelixcoord: 21..38

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122417contigM-pyrifera_M_contig122417:24..488 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122417.4622.1mRNA_M-pyrifera_M_contig122417.4622.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122417 12..488 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122417.4622.1 ID=prot_M-pyrifera_M_contig122417.4622.1|Name=mRNA_M-pyrifera_M_contig122417.4622.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=155bp
MLAVMNPLSHEKEEVLRESDMAGAILVCLGLGFVLLLTGKVQFGYIYGFG
LVGCIALTTIFNLLSPPTSPGISIETVVSVFGYCLLPITALAALGILFEL
HSPLGAVLALAAVAWATYTATHFFDAALHAKGKRTLLAYPTFLLYAVFAL
LAVF*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR006977Yip1