prot_M-pyrifera_M_contig122408.4621.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig122408.4621.1
Unique Name	prot_M-pyrifera_M_contig122408.4621.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	132

Homology

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BLAST of mRNA_M-pyrifera_M_contig122408.4621.1 vs. uniprot
Match: A0A520XMU5_9ACTN (Uncharacterized protein n=2 Tax=Acidimicrobiales bacterium TaxID=2201156 RepID=A0A520XMU5_9ACTN)

HSP 1 Score: 151 bits (382), Expect = 7.970e-45
Identity = 76/131 (58.02%), Postives = 98/131 (74.81%), Query Frame = 0

Query:    1 DLTDEQRRLAAAGDLNVLALLMLVGSALFALANWWIGTMNWLAVALSISSTLAWSLGLWRRSPITTSFVKIGFGVSGLVAPVVGLAGVVAGIAGFGWGWALLGAAFVYFAFSVLGLEIIERAHAAGVVDSY 131
            +L+DEQRR AA GDLNVLA+L  V S  FAL + WIG + W+AV  ++SS LA +LGL RR+ +  +FV++GFG+SGL AP+V +AG+V G+ G  WGWA+LG A +YF  SVLGLEIIERA  AGV+  Y
Sbjct:    4 ELSDEQRREAAEGDLNVLAVLTFVSSTAFALVSGWIGLIGWIAVVATVSSALATTLGLLRRNDVIVAFVQVGFGISGLAAPIVAIAGLVLGLVGITWGWAVLGGAVIYFGLSVLGLEIIERAETAGVITKY 134

[Close]

BLAST of mRNA_M-pyrifera_M_contig122408.4621.1 vs. uniprot
Match: A0A351EUF6_9ACTN (Uncharacterized protein n=1 Tax=Acidimicrobiaceae bacterium TaxID=2024894 RepID=A0A351EUF6_9ACTN)

HSP 1 Score: 142 bits (359), Expect = 2.740e-41
Identity = 74/132 (56.06%), Postives = 95/132 (71.97%), Query Frame = 0

Query:    1 DLTDEQRRLAAAGDLNVLALLMLVGSALFALANWWIGTMNWLAVALSISSTLAWSLGLWRRSPITTSFVKIGFGVSGLVAPVVGLAGVVAGIAG-FGWGWALLGAAFVYFAFSVLGLEIIERAHAAGVVDSY 131
            +LT ++ R AA GDL+VLA+LMLVGS  FA  N W+GTM W+A AL++SSTL W+ GL RRS    +FVKIGFG SGL AP V + GV+  + G + WGWA++  A VYF FS+LGLEIIERA   G ++ +
Sbjct:    4 ELTQDELRDAAGGDLSVLAVLMLVGSVSFAALNMWVGTMGWIAAALAVSSTLLWTTGLLRRSATIAAFVKIGFGFSGLAAPAVAIVGVLLALVGDYRWGWAVVAGAVVYFFFSLLGLEIIERAQETGAIERF 135

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig122408.4621.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig122408.4621.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2


Match Name	E-value	Identity	Description
A0A520XMU5_9ACTN	7.970e-45	58.02	Uncharacterized protein n=2 Tax=Acidimicrobiales b...	[more]
A0A351EUF6_9ACTN	2.740e-41	56.06	Uncharacterized protein n=1 Tax=Acidimicrobiaceae ...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 120..131
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 99..119
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 94..98
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 71..93
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 41..59
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 1..14
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 60..70
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 15..35
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 36..40
None	No IPR available	TMHMM	TMhelix		coord: 71..93
None	No IPR available	TMHMM	TMhelix		coord: 36..58
None	No IPR available	TMHMM	TMhelix		coord: 9..31
None	No IPR available	TMHMM	TMhelix		coord: 97..119

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig122408	contig	M-pyrifera_M_contig122408:121..516 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig122408.4621.1	mRNA_M-pyrifera_M_contig122408.4621.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig122408 121..516 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig122408.4621.1 ID=prot_M-pyrifera_M_contig122408.4621.1|Name=mRNA_M-pyrifera_M_contig122408.4621.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=132bp
DLTDEQRRLAAAGDLNVLALLMLVGSALFALANWWIGTMNWLAVALSISS
TLAWSLGLWRRSPITTSFVKIGFGVSGLVAPVVGLAGVVAGIAGFGWGWA
LLGAAFVYFAFSVLGLEIIERAHAAGVVDSY*