prot_M-pyrifera_M_contig122382.4613.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig122382.4613.1
Unique Name	prot_M-pyrifera_M_contig122382.4613.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	55

Homology

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BLAST of mRNA_M-pyrifera_M_contig122382.4613.1 vs. uniprot
Match: UPI00194FCEEF (universal stress protein n=1 Tax=Spirulina major TaxID=270636 RepID=UPI00194FCEEF)

HSP 1 Score: 47.8 bits (112), Expect = 3.890e-5
Identity = 23/54 (42.59%), Postives = 30/54 (55.56%), Query Frame = 0

Query:    1 PGEHFLTYLEEYNPDLVVVGRRKNGGLARLLGGSFSEYIAKHWKGSVIVVPGSE 54
            PG       +++ PDL+VVGRR    +  L+ GS S YI      SV+VV GSE
Sbjct:  104 PGRRIQQIAKQWQPDLIVVGRRDRNNIQELMMGSVSNYIVHRASCSVLVVQGSE 157

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BLAST of mRNA_M-pyrifera_M_contig122382.4613.1 vs. uniprot
Match: A0A1H3YF47_9BACT (Nucleotide-binding universal stress protein, UspA family n=1 Tax=Arachidicoccus rhizosphaerae TaxID=551991 RepID=A0A1H3YF47_9BACT)

HSP 1 Score: 47.0 bits (110), Expect = 6.980e-5
Identity = 23/51 (45.10%), Postives = 33/51 (64.71%), Query Frame = 0

Query:    1 PGEHFLTYLEEYNPDLVVVGRRKNGGLARLLGGSFSEYIAKHWKGSVIVVP 51
            P E  L  L+E++ +++VVG     GLA LL GS +EY+ +H K  V+VVP
Sbjct:   97 PREEILLKLKEWDAEVLVVGTHGRKGLAHLLLGSTAEYLVRHAKVPVLVVP 147

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BLAST of mRNA_M-pyrifera_M_contig122382.4613.1 vs. uniprot
Match: U7QJK7_9CYAN (Universal stress protein n=4 Tax=Lyngbya TaxID=28073 RepID=U7QJK7_9CYAN)

HSP 1 Score: 47.0 bits (110), Expect = 7.900e-5
Identity = 21/50 (42.00%), Postives = 31/50 (62.00%), Query Frame = 0

Query:    1 PGEHFLTYLEEYNPDLVVVGRRKNGGLARLLGGSFSEYIAKHWKGSVIVV 50
            PG       +E+N DL+V+GRR   GL++L+ GS S Y+  H   SV++V
Sbjct:  107 PGRQICQVAQEWNADLIVMGRRGYSGLSQLILGSVSNYVLHHAHCSVLIV 156

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig122382.4613.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig122382.4613.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3


Match Name	E-value	Identity	Description
UPI00194FCEEF	3.890e-5	42.59	universal stress protein n=1 Tax=Spirulina major T...	[more]
A0A1H3YF47_9BACT	6.980e-5	45.10	Nucleotide-binding universal stress protein, UspA ...	[more]
U7QJK7_9CYAN	7.900e-5	42.00	Universal stress protein n=4 Tax=Lyngbya TaxID=280...	[more]

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR014729	Rossmann-like alpha/beta/alpha sandwich fold	GENE3D	3.40.50.620		coord: 1..54 e-value: 2.5E-12 score: 49.3
IPR006016	UspA	PFAM	PF00582	Usp	coord: 1..51 e-value: 3.8E-12 score: 46.9
None	No IPR available	SUPERFAMILY	52402	Adenine nucleotide alpha hydrolases-like	coord: 1..52

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig122382	contig	M-pyrifera_M_contig122382:176..391 +

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig122382.4613.1	mRNA_M-pyrifera_M_contig122382.4613.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig122382 176..391 +

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig122382.4613.1 ID=prot_M-pyrifera_M_contig122382.4613.1|Name=mRNA_M-pyrifera_M_contig122382.4613.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=55bp
PGEHFLTYLEEYNPDLVVVGRRKNGGLARLLGGSFSEYIAKHWKGSVIVV
PGSE*

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR014729	Rossmann-like_a/b/a_fold
IPR006016	UspA