prot_M-pyrifera_M_contig122244.4589.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig122244.4589.1
Unique Nameprot_M-pyrifera_M_contig122244.4589.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length152
Homology
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BLAST of mRNA_M-pyrifera_M_contig122244.4589.1 vs. uniprot
Match: A0A8G2BGP3_9PROT (Uncharacterized protein n=2 Tax=Thalassobaculaceae TaxID=2844864 RepID=A0A8G2BGP3_9PROT)

HSP 1 Score: 187 bits (474), Expect = 8.630e-58
Identity = 91/150 (60.67%), Postives = 119/150 (79.33%), Query Frame = 0 
Query:    1 SRLSITGGFLLGFGVIATATNRPSLNVNAVLANGGAWDIPWRTFLVQVGDPGHYAYAPLWRHLTVGDLDLPWLIYGVMTTFTLLAAALATLVMLRGEEFIIGIVAMAYQILVIQALTIYVILLLAYTLCTFNFWTALLALGVLQYYRHMK 150
            S+L++T G LLG GVIA +  RPS ++NA++A+GGAWD+ WR FL  + +PG Y Y  LW  L+  DL   W+IYGV  +  LLA+A+ATLVMLRGEEF+IG+ AM Y+IL++QAL +YVI+LLAYTLCTFNFWTALLAL +LQYYR+++
Sbjct:   30 SKLAMTTGLLLGIGVIAASPERPSFDINAIVADGGAWDVTWRRFLTDIANPGLYRYDALWSMLSSQDLSGSWMIYGVAVSAALLASAIATLVMLRGEEFLIGVFAMMYEILLMQALAMYVIMLLAYTLCTFNFWTALLALMILQYYRYVQ 179
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BLAST of mRNA_M-pyrifera_M_contig122244.4589.1 vs. uniprot
Match: UPI0019C3F96E (Uncharacterized protein n=2 Tax=Thalassobaculum fulvum TaxID=1633335 RepID=UPI0019C3F96E)

HSP 1 Score: 102 bits (255), Expect = 2.070e-24
Identity = 62/147 (42.18%), Postives = 84/147 (57.14%), Query Frame = 0 
Query:    4 SITGGFLLGFGVIATATNRPSLNVNAVLANGGAWDIPWRTFLVQVGDPGHYAYAPLWRHLTVGDLDLPWLIYGVMTTFTLLA-AALATLVMLRGEEFIIGIVAMAYQILVIQALTIYVILLLAYTLCTFNFWTALLALGVLQYYRHM 149
            +++ G  L + ++      PS  ++AV   GG WDIPW TFL    DP  Y Y  L   L   D+D P L   +++   LL  A +A LV LR  +   G++ + + +L  QA+TIYV  L AYTL T NFW AL+AL VLQYYRH+
Sbjct:   58 AMSAGVALAWCILYADPFGPSFRISAVFEVGGPWDIPWTTFLTNRADPALYGYEKLLPVLRTPDID-PSLALALLSIGVLLVIAVVAALVYLRDMDLAAGLLGIPFLVLFSQAVTIYVTALFAYTLNTLNFWAALVALAVLQYYRHL 203
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig122244.4589.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 2
Match NameE-valueIdentityDescription
A0A8G2BGP3_9PROT8.630e-5860.67Uncharacterized protein n=2 Tax=Thalassobaculaceae... [more]
UPI0019C3F96E2.070e-2442.18Uncharacterized protein n=2 Tax=Thalassobaculum fu... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 99..119
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 125..146
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 93..98
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 72..92
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_H_REGIONSignal peptide H-regioncoord: 3..13
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_C_REGIONSignal peptide C-regioncoord: 14..17
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 147..151
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 18..71
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 120..124
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDE_N_REGIONSignal peptide N-regioncoord: 1..2
NoneNo IPR availablePHOBIUSSIGNAL_PEPTIDESignal Peptidecoord: 1..17
NoneNo IPR availableSIGNALP_EUKSignalP-noTMSignalP-noTMcoord: 1..19
score: 0.496
NoneNo IPR availableTMHMMTMhelixcoord: 70..92
NoneNo IPR availableTMHMMTMhelixcoord: 99..116
NoneNo IPR availableTMHMMTMhelixcoord: 121..143

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig122244contigM-pyrifera_M_contig122244:2..457 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig122244.4589.1mRNA_M-pyrifera_M_contig122244.4589.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig122244 2..457 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig122244.4589.1 ID=prot_M-pyrifera_M_contig122244.4589.1|Name=mRNA_M-pyrifera_M_contig122244.4589.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=152bp
SRLSITGGFLLGFGVIATATNRPSLNVNAVLANGGAWDIPWRTFLVQVGD
PGHYAYAPLWRHLTVGDLDLPWLIYGVMTTFTLLAAALATLVMLRGEEFI
IGIVAMAYQILVIQALTIYVILLLAYTLCTFNFWTALLALGVLQYYRHMK
H*
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