prot_M-pyrifera_M_contig121853.4499.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121853.4499.1
Unique Nameprot_M-pyrifera_M_contig121853.4499.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length61
Homology
[Close]
BLAST of mRNA_M-pyrifera_M_contig121853.4499.1 vs. uniprot
Match: A0A2E7KBM7_9PLAN (Uncharacterized protein n=2 Tax=Gimesia TaxID=1649453 RepID=A0A2E7KBM7_9PLAN)

HSP 1 Score: 114 bits (286), Expect = 2.190e-32
Identity = 58/60 (96.67%), Postives = 60/60 (100.00%), Query Frame = 0 
Query:    1 MTYNSKDKLNAFHLTGSVGVSTLLGLLTGSWMVFLVMSILLVGSSLLTGEIRLPDHRTKR 60
            MTYNSKDKLNAFHLTGSVGVSTLLGLLTGSW+VFLVMSILLVGSSLLTGEIR+PDHRTKR
Sbjct:    1 MTYNSKDKLNAFHLTGSVGVSTLLGLLTGSWVVFLVMSILLVGSSLLTGEIRIPDHRTKR 60
[Close]
BLAST of mRNA_M-pyrifera_M_contig121853.4499.1 vs. uniprot
Match: A0A517WWH7_9PLAN (Uncharacterized protein n=1 Tax=Gimesia aquarii TaxID=2527964 RepID=A0A517WWH7_9PLAN)

HSP 1 Score: 103 bits (257), Expect = 5.860e-28
Identity = 52/60 (86.67%), Postives = 55/60 (91.67%), Query Frame = 0 
Query:    1 MTYNSKDKLNAFHLTGSVGVSTLLGLLTGSWMVFLVMSILLVGSSLLTGEIRLPDHRTKR 60
            MTYNSKDKLN FHLTGS+GVS LL LLTGSW+VFLVMS LLVGSSLLTGEIR+PDHR KR
Sbjct:    1 MTYNSKDKLNTFHLTGSLGVSVLLALLTGSWVVFLVMSFLLVGSSLLTGEIRIPDHRYKR 60
[Close]
BLAST of mRNA_M-pyrifera_M_contig121853.4499.1 vs. uniprot
Match: A0A518AXW3_9BACT (Uncharacterized protein n=1 Tax=Planctomycetes bacterium Pan216 TaxID=2527975 RepID=A0A518AXW3_9BACT)

HSP 1 Score: 49.3 bits (116), Expect = 1.750e-6
Identity = 24/54 (44.44%), Postives = 40/54 (74.07%), Query Frame = 0 
Query:    4 NSKDKLNAFHLTGSVGVSTLLGLLTGSWMVFLVMSILLVGSSLLTGEIRLPDHR 57
            N+++KLNA  + G V ++ +  LLT SW+VFL+++I+L G+S L+G+IR+   R
Sbjct:    3 NARNKLNAATIQGIVLIAGVFALLTRSWIVFLLLAIVLAGTSFLSGDIRIRSRR 56
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121853.4499.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 3
Match NameE-valueIdentityDescription
A0A2E7KBM7_9PLAN2.190e-3296.67Uncharacterized protein n=2 Tax=Gimesia TaxID=1649... [more]
A0A517WWH7_9PLAN5.860e-2886.67Uncharacterized protein n=1 Tax=Gimesia aquarii Ta... [more]
A0A518AXW3_9BACT1.750e-644.44Uncharacterized protein n=1 Tax=Planctomycetes bac... [more]
back to top
InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..19
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 48..60
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 20..47
NoneNo IPR availableTMHMMTMhelixcoord: 20..42

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121853contigM-pyrifera_M_contig121853:154..336 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121853.4499.1mRNA_M-pyrifera_M_contig121853.4499.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121853 154..336 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121853.4499.1 ID=prot_M-pyrifera_M_contig121853.4499.1|Name=mRNA_M-pyrifera_M_contig121853.4499.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=61bp
MTYNSKDKLNAFHLTGSVGVSTLLGLLTGSWMVFLVMSILLVGSSLLTGE
IRLPDHRTKR*
back to top