prot_M-pyrifera_M_contig121852.4498.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121852.4498.1
Unique Nameprot_M-pyrifera_M_contig121852.4498.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length176
Homology
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A3D5DFI4_9GAMM (Metalloprotease PmbA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D5DFI4_9GAMM)

HSP 1 Score: 261 bits (668), Expect = 2.360e-83
Identity = 129/176 (73.30%), Postives = 148/176 (84.09%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            V VRNGELESIEHH+DK L+L+ Y GK KGTATTTDFS +SIE+TV AAD+IAR AE DPYAGLI+P +LA EIPDLDLDHPW++ P++A+ELA RCD AAR+F P V Q+DDVSV QH GLRGYA++DGFA AY ++RH LSCVVVGK  G MQRGYWYT ARDA ELEAPE VG
Sbjct:   42 VTVRNGELESIEHHEDKALSLSTYRGKSKGTATTTDFSTQSIEDTVVAADRIARLAEPDPYAGLINPKYLAQEIPDLDLDHPWNLGPESAVELAKRCDTAAREFDPGVKQIDDVSVAQHHGLRGYASSDGFAHAYLSSRHSLSCVVVGKSEGVMQRGYWYTVARDANELEAPEFVG 217          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A831RIE9_9GAMM (Metalloprotease PmbA n=1 Tax=Methylothermaceae bacterium TaxID=2268196 RepID=A0A831RIE9_9GAMM)

HSP 1 Score: 196 bits (499), Expect = 4.930e-58
Identity = 97/176 (55.11%), Postives = 118/176 (67.05%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            V  R GE+E++EHH+D+ L +T Y G RKG+A+TTD S  S+ ETV AA  IAR+A EDPYAGL DP  LA EIPDLDL HPW +  + AIE+AI C+  A   HP +   +  S+N H GLR    T GF   YPA+RH +SC VVG+  G MQR YWYT ARD  +LE PE VG
Sbjct:   41 VNARMGEVETVEHHRDQSLAVTVYFGHRKGSASTTDLSDASLRETVEAACLIARHANEDPYAGLPDPERLAREIPDLDLHHPWSLSAEQAIEIAIACERVALKHHPEIVNSEGASINTHQGLRVLGNTLGFLHGYPASRHSISCAVVGQCGGQMQRDYWYTVARDPKDLEHPETVG 216          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: UPI00041B6537 (metalloprotease PmbA n=1 Tax=Methylohalobius crimeensis TaxID=244365 RepID=UPI00041B6537)

HSP 1 Score: 195 bits (496), Expect = 1.380e-57
Identity = 95/176 (53.98%), Postives = 121/176 (68.75%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            VG R GE E++EHH+D+ L +T Y G+RKG+A+TT+ S  S++ET+ AA  IARYA EDPYAGL DP  LA +IPDLDLDHPW+I  D AIE  I C+ AAR+FHP +   +   +N H G++    T GF  AYPA++H LSC VVGK    MQR +WYT AR   +L +P  VG
Sbjct:   41 VGARLGEPETLEHHRDQSLAVTVYFGQRKGSASTTNLSEASLKETLEAACAIARYASEDPYAGLPDPDKLARDIPDLDLDHPWEITADQAIERVIECETAAREFHPEIVNSEGADLNSHHGIQVLGNTSGFLHAYPASQHSLSCAVVGKRGEQMQRDHWYTLARHPEDLNSPASVG 216          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A0S2TIC0_9GAMM (Peptidase PmbA n=1 Tax=Candidatus Tenderia electrophaga TaxID=1748243 RepID=A0A0S2TIC0_9GAMM)

HSP 1 Score: 192 bits (489), Expect = 1.230e-56
Identity = 93/176 (52.84%), Postives = 121/176 (68.75%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            V VR GE+E++EH+ DK L +T Y  +RKG+A+TTDF   +I +TVAAA +IARY  EDPYAGL D A +A E+ DLDL+HPWDI P+ AIELA+  +  ARD+   +   +  SV+ H   R Y  + GF   Y  TRHG+SC V+G+   +MQR YWY+SARDA  LEAP+ VG
Sbjct:   32 VNVRLGEVETVEHNHDKGLGVTVYFDRRKGSASTTDFGQEAIRDTVAAACRIARYTAEDPYAGLADAALMAGEVIDLDLNHPWDIAPERAIELALESEAVARDYDARITNSEGASVSSHQAFRVYGNSHGFVGGYGGTRHGVSCCVIGQQGDNMQRDYWYSSARDACSLEAPDIVG 207          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A558DFX8_9GAMM (Metalloprotease PmbA n=2 Tax=Sedimenticola TaxID=349742 RepID=A0A558DFX8_9GAMM)

HSP 1 Score: 191 bits (484), Expect = 9.200e-56
Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            + VR G++E+IEH +D+ L +T Y G+RKG+A+T+DF   +I++TV AA  IARY  EDPY+GL D   +AT++PDLDL HPWDI P+AAIEL I C+ AA DF   +   +  S+N HSGL  Y  + GF   YP++RH LSC V+G+  G MQR YWYT  R + +LE    VG
Sbjct:   45 ISVRKGDVETIEHIRDQGLGITVYFGQRKGSASTSDFKPGAIKDTVRAACNIARYTNEDPYSGLADAELMATDLPDLDLYHPWDITPEAAIELGITCEKAALDFDRRISNTEGASINSHSGLHVYGNSHGFIGGYPSSRHSLSCSVIGEQDGAMQRDYWYTVGRKSTDLETASAVG 220          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A2T9ZQV4_9GAMM (Metalloprotease PmbA n=2 Tax=gamma proteobacterium symbiont of Ctena orbiculata TaxID=1968598 RepID=A0A2T9ZQV4_9GAMM)

HSP 1 Score: 190 bits (482), Expect = 1.590e-55
Identity = 95/174 (54.60%), Postives = 117/174 (67.24%), Query Frame = 0
Query:    3 VRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            VR GE E+IEH +D  L +T Y G RKG+A+T+D S ++I+ETV AA   ARY  EDP +GL +   +ATE PDLDL HPW    D AIELAIRC++AARDF P +   +  S+N H GL  Y  T GF   YP++RH LSC VVGK  G MQR YWYT +R +  LE+PE VG
Sbjct:   41 VRLGETETIEHTRDNGLGVTVYFGHRKGSASTSDLSPQAIKETVEAACNFARYTSEDPCSGLAEAELMATETPDLDLYHPWHQSVDEAIELAIRCEDAARDFDPRIFNSEGASLNSHDGLHVYGNTHGFVGGYPSSRHSLSCAVVGKQDGSMQRDYWYTLSRQSERLESPEEVG 214          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A3M0YDT0_9GAMM (Metalloprotease PmbA n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3M0YDT0_9GAMM)

HSP 1 Score: 190 bits (482), Expect = 1.740e-55
Identity = 97/176 (55.11%), Postives = 121/176 (68.75%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            V VR GE+E+IE+H+DK L +T Y GKRKG+A+TTDFS  +I ETV AA  IAR+AEEDP AGL DP  LA E PDLDL HPWDI+ + AI LA  C+ AA      +   +  S++ H G+R Y  + GF  AYP+TRHGLSC V+ ++   MQR YWYT+ R   +LEAPE VG
Sbjct:   43 VTVRLGEVETIEYHRDKGLGVTVYMGKRKGSASTTDFSPAAIRETVKAACAIARHAEEDPCAGLPDPDLLAWEYPDLDLYHPWDIDAEGAIALARDCEKAALALDKRIQNSEGASLSSHQGMRVYGNSHGFVGAYPSTRHGLSCSVIAREGEEMQREYWYTAGRAKEDLEAPEGVG 218          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A3N9UU90_9GAMM (Metalloprotease PmbA (Fragment) n=1 Tax=Methylococcus sp. TaxID=39769 RepID=A0A3N9UU90_9GAMM)

HSP 1 Score: 185 bits (470), Expect = 2.820e-55
Identity = 95/176 (53.98%), Postives = 121/176 (68.75%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            V  R GE+E++EHH+ + L LT Y G+RKG+A+T+D S  ++ ETVAAA +IAR+A EDP AGL D AWLATE P+LDL HPW IEP+AAIELA+ C+NAAR  HP +   +  S+N   GLR    + GF   Y +TRH LS  V+G+    MQR  W+T ARD  +L APE VG
Sbjct:   32 VTARLGEVETVEHHRSRGLGLTVYIGQRKGSASTSDLSPTAMRETVAAAVRIARHAAEDPCAGLPDAAWLATEFPELDLFHPWRIEPEAAIELAVACENAARQHHPDITNSEGASLNTFQGLRVMGNSLGFLHGYASTRHSLSVSVIGERDDQMQRDDWWTVARDPRDLHAPEDVG 207          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A257SZ75_9GAMM (Metalloprotease PmbA n=1 Tax=Chromatiales bacterium 21-64-14 TaxID=1970504 RepID=A0A257SZ75_9GAMM)

HSP 1 Score: 188 bits (477), Expect = 1.100e-54
Identity = 92/176 (52.27%), Postives = 116/176 (65.91%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            V VR GE+E++E+H+D+ L +T Y G RKG+A+T D    ++ +TV AA  IARY  EDPYAGL D A +A  IP LDLDHPW +  DAAIEL + C+NAAR+  P +   +   VN H G+R YA T GF   Y +TRH LSC V+ +    MQR YWYT ARD  ELE+ E VG
Sbjct:   49 VNVRLGEVETVEYHRDRGLGVTVYFGARKGSASTADLRTDTVRDTVRAACDIARYTAEDPYAGLADAARMARVIPQLDLDHPWMLNADAAIELTLACENAARELDPRITNSEGAGVNSHRGIRVYANTHGFMGGYASTRHSLSCAVIAQSEQGMQRDYWYTVARDRTELESAEAVG 224          
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Match: A0A2N6CY06_9GAMM (Metalloprotease PmbA n=2 Tax=Sedimenticola selenatireducens TaxID=191960 RepID=A0A2N6CY06_9GAMM)

HSP 1 Score: 187 bits (475), Expect = 2.000e-54
Identity = 90/176 (51.14%), Postives = 120/176 (68.18%), Query Frame = 0
Query:    1 VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAADQIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNAARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKDAGHMQRGYWYTSARDAAELEAPEPVG 176
            + VR GE+E+IEH +D+ L +T Y G+RKGTA+T+DF   +I +TV AA  IAR+  +DP +GL D   +AT+IPDLDL HPWDI P+ AIEL  RC++AA +  P +   +  SVN HSGL  Y  + GF   YP++RH LSC V+G+  G MQ  YWYT +RDA +LE+   VG
Sbjct:   45 INVRKGEVETIEHTRDQGLGITVYFGQRKGTASTSDFKPEAIRDTVRAACNIARFTNDDPCSGLADADRMATDIPDLDLYHPWDITPETAIELGKRCESAALELDPRISNTEGASVNSHSGLHVYGNSHGFIGGYPSSRHSLSCSVIGQQNGSMQLDYWYTVSRDAKDLESEFDVG 220          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121852.4498.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A3D5DFI4_9GAMM2.360e-8373.30Metalloprotease PmbA n=1 Tax=Gammaproteobacteria b... [more]
A0A831RIE9_9GAMM4.930e-5855.11Metalloprotease PmbA n=1 Tax=Methylothermaceae bac... [more]
UPI00041B65371.380e-5753.98metalloprotease PmbA n=1 Tax=Methylohalobius crime... [more]
A0A0S2TIC0_9GAMM1.230e-5652.84Peptidase PmbA n=1 Tax=Candidatus Tenderia electro... [more]
A0A558DFX8_9GAMM9.200e-5651.14Metalloprotease PmbA n=2 Tax=Sedimenticola TaxID=3... [more]
A0A2T9ZQV4_9GAMM1.590e-5554.60Metalloprotease PmbA n=2 Tax=gamma proteobacterium... [more]
A0A3M0YDT0_9GAMM1.740e-5555.11Metalloprotease PmbA n=1 Tax=Gammaproteobacteria b... [more]
A0A3N9UU90_9GAMM2.820e-5553.98Metalloprotease PmbA (Fragment) n=1 Tax=Methylococ... [more]
A0A257SZ75_9GAMM1.100e-5452.27Metalloprotease PmbA n=1 Tax=Chromatiales bacteriu... [more]
A0A2N6CY06_9GAMM2.000e-5451.14Metalloprotease PmbA n=2 Tax=Sedimenticola selenat... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002510Metalloprotease TldD/PmbAPFAMPF01523PmbA_TldDcoord: 1..165
e-value: 9.5E-23
score: 81.4
IPR035068Metalloprotease TldD/PmbA, N-terminalGENE3D3.30.2290.10coord: 1..176
e-value: 2.0E-65
score: 222.3
NoneNo IPR availablePANTHERPTHR43421FAMILY NOT NAMEDcoord: 2..175
IPR036059Metalloprotease TldD/PmbA superfamilySUPERFAMILY111283Putative modulator of DNA gyrase, PmbA/TldDcoord: 2..172

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121852contigM-pyrifera_M_contig121852:3..530 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121852.4498.1mRNA_M-pyrifera_M_contig121852.4498.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121852 3..530 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121852.4498.1 ID=prot_M-pyrifera_M_contig121852.4498.1|Name=mRNA_M-pyrifera_M_contig121852.4498.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=176bp
VGVRNGELESIEHHQDKVLTLTAYHGKRKGTATTTDFSHRSIEETVAAAD
QIARYAEEDPYAGLIDPAWLATEIPDLDLDHPWDIEPDAAIELAIRCDNA
ARDFHPAVDQVDDVSVNQHSGLRGYATTDGFAAAYPATRHGLSCVVVGKD
AGHMQRGYWYTSARDAAELEAPEPVG
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR002510TldD/PmbA
IPR035068TldD/PmbA_N
IPR036059TldD/PmbA_sf