prot_M-pyrifera_M_contig121839.4493.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview


Name	mRNA_M-pyrifera_M_contig121839.4493.1
Unique Name	prot_M-pyrifera_M_contig121839.4493.1
Type	polypeptide
Organism	Macrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length	177

Homology

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: UPI001593FAE2 (ABC transporter permease n=2 Tax=Parasphingorhabdus flavimaris TaxID=266812 RepID=UPI001593FAE2)

HSP 1 Score: 349 bits (896), Expect = 4.370e-120
Identity = 176/177 (99.44%), Postives = 176/177 (99.44%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPP SVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPLSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: A0A2M7LD94_9SPHN (Transport permease protein n=1 Tax=Sphingomonadales bacterium CG_4_10_14_3_um_filter_58_15 TaxID=1974093 RepID=A0A2M7LD94_9SPHN)

HSP 1 Score: 333 bits (855), Expect = 7.590e-114
Identity = 164/177 (92.66%), Postives = 172/177 (97.18%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTL+FL+IFTVA+GRGDR++LG PFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTI+DYLTPP SVGELLAALV +SMTRA LVGFAVWLAMFIWPGV VGVTHWWAVLWFGIMG+AMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLLFLVIFTVAMGRGDRSVLGVPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIIDYLTPPLSVGELLAALVASSMTRAFLVGFAVWLAMFIWPGVHVGVTHWWAVLWFGIMGSAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: A0A2G2D809_9SPHN (Transport permease protein n=1 Tax=Sphingopyxis sp. TaxID=1908224 RepID=A0A2G2D809_9SPHN)

HSP 1 Score: 333 bits (854), Expect = 1.080e-113
Identity = 162/177 (91.53%), Postives = 172/177 (97.18%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTL+FL+IFTVA+GRGDR+++G PFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTI+DYLTPP SVGELLAALV ASMTRAALVGFAVWLAMF+WPGVDV + HWWAVLWFG+MGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLLFLVIFTVAMGRGDRSVMGVPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIIDYLTPPLSVGELLAALVAASMTRAALVGFAVWLAMFLWPGVDVSLVHWWAVLWFGLMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: A0A1B6Z835_9SPHN (Transport permease protein n=1 Tax=Sphingomonadales bacterium EhC05 TaxID=1849171 RepID=A0A1B6Z835_9SPHN)

HSP 1 Score: 333 bits (854), Expect = 1.080e-113
Identity = 164/177 (92.66%), Postives = 172/177 (97.18%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTL+FLIIFTVALGRGDRT+LG PFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPP SVGELLAALVGASMTRAALVGFAVWLAM +WPGV VGVTHWWAV+WFG+MG+AMLS LGV+TSIWAEKFDHAAAVTNFVVAPL+LLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLLFLIIFTVALGRGDRTVLGVPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPLSVGELLAALVGASMTRAALVGFAVWLAMALWPGVSVGVTHWWAVIWFGLMGSAMLSLLGVMTSIWAEKFDHAAAVTNFVVAPLSLLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: A0A220W542_9SPHN (Transport permease protein n=5 Tax=unclassified Sphingorhabdus TaxID=2614947 RepID=A0A220W542_9SPHN)

HSP 1 Score: 333 bits (853), Expect = 1.530e-113
Identity = 165/177 (93.22%), Postives = 171/177 (96.61%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTL+FLIIFTVA+GR DRT+LG PFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPP SVGELLAALV ASMTRAALVGFAVWLAMF+WPGV+VGV+HWWAVLWFG MGAAMLS LGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLLFLIIFTVAMGRADRTVLGVPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPLSVGELLAALVAASMTRAALVGFAVWLAMFVWPGVNVGVSHWWAVLWFGTMGAAMLSLLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: UPI001AA03027 (ABC transporter permease n=3 Tax=Sphingomonadaceae TaxID=41297 RepID=UPI001AA03027)

HSP 1 Score: 316 bits (810), Expect = 5.330e-107
Identity = 154/177 (87.01%), Postives = 166/177 (93.79%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTL+FL+IFTVALGRGDRT+LG PFADFIAPGLICMGM+QNAFANSSF++LVGKIQGTIVDYL PP SVGELLA LV AS+TRAALVGFAVWLAM +WPGV+V V HWWAV+WFG MG+AML+ LGVLTSIWAEKFDHAAAVTNFVVAP ALLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLLFLVIFTVALGRGDRTVLGVPFADFIAPGLICMGMIQNAFANSSFALLVGKIQGTIVDYLMPPLSVGELLAGLVAASITRAALVGFAVWLAMALWPGVNVSVNHWWAVIWFGFMGSAMLALLGVLTSIWAEKFDHAAAVTNFVVAPAALLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: A0A1N6G5B4_9SPHN (Transport permease protein n=1 Tax=Parasphingorhabdus marina DSM 22363 TaxID=1123272 RepID=A0A1N6G5B4_9SPHN)

HSP 1 Score: 315 bits (806), Expect = 2.160e-106
Identity = 152/177 (85.88%), Postives = 165/177 (93.22%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTL+FL+IFTVALGRGDR +LG PFADFIAPGLICMGM+QNAFANSSFS+LVGKIQGTIVDYL PP S+GELL  LV A++TRAALVGFAVWLAM +WPGV V VTHWWAV+WFG+MG+ ML+ LGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLLFLVIFTVALGRGDRMVLGVPFADFIAPGLICMGMIQNAFANSSFSLLVGKIQGTIVDYLMPPLSIGELLGGLVAAAVTRAALVGFAVWLAMALWPGVQVSVTHWWAVIWFGLMGSVMLALLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: A0A6H2DH42_9SPHN (Transport permease protein n=1 Tax=Parasphingorhabdus halotolerans TaxID=2725558 RepID=A0A6H2DH42_9SPHN)

HSP 1 Score: 307 bits (787), Expect = 1.680e-103
Identity = 152/177 (85.88%), Postives = 164/177 (92.66%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQTVWAPSITTL+FL+IFTVALGRG RT+LG PFADFIAPGLICMGM+QNAFANSSFS+LVGKIQGTIVDYL PP SVGELLA LV AS+TRA LVGFAVWLAM +WPGV V + H WAV+WFG+MG+AML+ LGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID
Sbjct:   45 RRFFKVQLQTVWAPSITTLLFLVIFTVALGRGGRTVLGVPFADFIAPGLICMGMIQNAFANSSFSLLVGKIQGTIVDYLMPPLSVGELLAGLVCASITRAVLVGFAVWLAMALWPGVSVWIVHPWAVIWFGLMGSAMLALLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 221

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: A0A7T2GLG6_9SPHN (Transport permease protein n=1 Tax=Sphingosinicella flava TaxID=2771430 RepID=A0A7T2GLG6_9SPHN)

HSP 1 Score: 288 bits (738), Expect = 3.390e-96
Identity = 143/177 (80.79%), Postives = 158/177 (89.27%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQT+WAPSITTL+FLIIFTVALG   RT+LG PFADFIAPGLI MGM+QNAFANSSFS+LVGKIQGTIVDYL PP SVGEL+AALVGAS+TRA LVG  VWLAM +WPGV V   H  A++WFG+MG+ ML+F GVLTSIWAEKFDHAAAVTNFVVAPL+LLSGTFYSI+
Sbjct:   35 RRFFKVQLQTIWAPSITTLLFLIIFTVALGGAGRTVLGVPFADFIAPGLIIMGMIQNAFANSSFSLLVGKIQGTIVDYLMPPLSVGELIAALVGASVTRAILVGITVWLAMLLWPGVHVAPVHPLAIIWFGLMGSMMLAFFGVLTSIWAEKFDHAAAVTNFVVAPLSLLSGTFYSIE 211

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BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Match: UPI00101C3178 (ABC transporter permease n=1 Tax=Sphingosinicella sp. CPCC 101087 TaxID=2497754 RepID=UPI00101C3178)

HSP 1 Score: 288 bits (737), Expect = 4.810e-96
Identity = 140/177 (79.10%), Postives = 160/177 (90.40%), Query Frame = 0

Query:    1 RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLICMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRAALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAEKFDHAAAVTNFVVAPLALLSGTFYSID 177
            RRFFKVQLQT+WAP++TT++FL+IFTVALGR  RT++GAPFADF+APGLI MGMLQNAFANSSFS+LVGKIQGTIVDYL PP SVGEL+  LVGA++TRA LVGFAVWLAM +WPGV V   H  AVLWFG+MG+AML FLG++TS+WAEKFDHAAAVTNFVVAPL+LLSGTFYSI 
Sbjct:   35 RRFFKVQLQTIWAPAVTTMLFLVIFTVALGREGRTVMGAPFADFVAPGLIVMGMLQNAFANSSFSLLVGKIQGTIVDYLMPPLSVGELITGLVGAAVTRAVLVGFAVWLAMLLWPGVHVIPQHPLAVLWFGLMGSAMLGFLGLITSVWAEKFDHAAAVTNFVVAPLSLLSGTFYSIQ 211

The following BLAST results are available for this feature:

BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot

BLAST of mRNA_M-pyrifera_M_contig121839.4493.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
UPI001593FAE2	4.370e-120	99.44	ABC transporter permease n=2 Tax=Parasphingorhabdu...	[more]
A0A2M7LD94_9SPHN	7.590e-114	92.66	Transport permease protein n=1 Tax=Sphingomonadale...	[more]
A0A2G2D809_9SPHN	1.080e-113	91.53	Transport permease protein n=1 Tax=Sphingopyxis sp...	[more]
A0A1B6Z835_9SPHN	1.080e-113	92.66	Transport permease protein n=1 Tax=Sphingomonadale...	[more]
A0A220W542_9SPHN	1.530e-113	93.22	Transport permease protein n=5 Tax=unclassified Sp...	[more]
UPI001AA03027	5.330e-107	87.01	ABC transporter permease n=3 Tax=Sphingomonadaceae...	[more]
A0A1N6G5B4_9SPHN	2.160e-106	85.88	Transport permease protein n=1 Tax=Parasphingorhab...	[more]
A0A6H2DH42_9SPHN	1.680e-103	85.88	Transport permease protein n=1 Tax=Parasphingorhab...	[more]
A0A7T2GLG6_9SPHN	3.390e-96	80.79	Transport permease protein n=1 Tax=Sphingosinicell...	[more]
UPI00101C3178	4.810e-96	79.10	ABC transporter permease n=1 Tax=Sphingosinicella ...	[more]

Pages

InterPro

Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013525	ABC-2 type transporter	PFAM	PF01061	ABC2_membrane	coord: 2..177 e-value: 1.6E-16 score: 60.4
None	No IPR available	PANTHER	PTHR43332	FAMILY NOT NAMED	coord: 2..177
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 30..40
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 88..114
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 150..154
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 12..29
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 41..59
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 60..87
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 126..149
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 177..177
None	No IPR available	PHOBIUS	CYTOPLASMIC_DOMAIN	Cytoplasmic domain	coord: 115..125
None	No IPR available	PHOBIUS	NON_CYTOPLASMIC_DOMAIN	Non cytoplasmic domain	coord: 1..11
None	No IPR available	PHOBIUS	TRANSMEMBRANE	Transmembrane region	coord: 155..176
None	No IPR available	TMHMM	TMhelix		coord: 12..30
None	No IPR available	TMHMM	TMhelix		coord: 154..176
None	No IPR available	TMHMM	TMhelix		coord: 125..147
None	No IPR available	TMHMM	TMhelix		coord: 88..110
None	No IPR available	TMHMM	TMhelix		coord: 45..67

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
M-pyrifera_M_contig121839	contig	M-pyrifera_M_contig121839:1..531 -

Analyses

This polypeptide is derived from or has results from the following analyses


Analysis Name	Date Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male	2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90	2022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male	2021-02-24

Relationships

This polypeptide derives from the following mRNA feature(s):


Feature Name	Unique Name	Species	Type	Position
mRNA_M-pyrifera_M_contig121839.4493.1	mRNA_M-pyrifera_M_contig121839.4493.1	Macrocystis pyrifera P11B4 male	mRNA	M-pyrifera_M_contig121839 1..531 -

Sequences

The following sequences are available for this feature:

polypeptide sequence

polypeptide sequence

>prot_M-pyrifera_M_contig121839.4493.1 ID=prot_M-pyrifera_M_contig121839.4493.1|Name=mRNA_M-pyrifera_M_contig121839.4493.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=177bp
RRFFKVQLQTVWAPSITTLMFLIIFTVALGRGDRTILGAPFADFIAPGLI
CMGMLQNAFANSSFSMLVGKIQGTIVDYLTPPSSVGELLAALVGASMTRA
ALVGFAVWLAMFIWPGVDVGVTHWWAVLWFGIMGAAMLSFLGVLTSIWAE
KFDHAAAVTNFVVAPLALLSGTFYSID

Annotated Terms

The following terms have been associated with this polypeptide:

Vocabulary: **INTERPRO**
Term	Definition
IPR013525	ABC_2_trans