prot_M-pyrifera_M_contig121833.4491.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121833.4491.1
Unique Nameprot_M-pyrifera_M_contig121833.4491.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length78
Homology
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BLAST of mRNA_M-pyrifera_M_contig121833.4491.1 vs. uniprot
Match: A0A327R3R7_9FLAO (Thiol-activated cytolysin n=1 Tax=Arenibacter echinorum TaxID=440515 RepID=A0A327R3R7_9FLAO)

HSP 1 Score: 58.2 bits (139), Expect = 4.540e-8
Identity = 27/63 (42.86%), Postives = 45/63 (71.43%), Query Frame = 0 
Query:   15 GTLAPGLIVEGAGVEPGDLRVIPLDRAPLTLVSSLASENPTVLVEEPDSTTLTQAVAQLKRDA 77
            G + PG I+EG  VEPGD++++  DRAP+T+ S L   N   +V++P+S T+ QA+A+++ +A
Sbjct:  102 GKIWPGAIIEGNSVEPGDIKLVITDRAPITINSDLVINNTFRVVDKPNSVTVQQAIAEMQIEA 164
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121833.4491.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A327R3R7_9FLAO4.540e-842.86Thiol-activated cytolysin n=1 Tax=Arenibacter echi... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121833contigM-pyrifera_M_contig121833:38..271 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121833.4491.1mRNA_M-pyrifera_M_contig121833.4491.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121833 38..271 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121833.4491.1 ID=prot_M-pyrifera_M_contig121833.4491.1|Name=mRNA_M-pyrifera_M_contig121833.4491.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=78bp
LSRSFDQLPAFGFSGTLAPGLIVEGAGVEPGDLRVIPLDRAPLTLVSSLA
SENPTVLVEEPDSTTLTQAVAQLKRDAD
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