prot_M-pyrifera_M_contig121780.4478.1 (polypeptide) Macrocystis pyrifera P11B4 male

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_M-pyrifera_M_contig121780.4478.1
Unique Nameprot_M-pyrifera_M_contig121780.4478.1
Typepolypeptide
OrganismMacrocystis pyrifera P11B4 male (Macrocystis pyrifera P11B4 male (Giant kelp))
Sequence length170
Homology
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: G6YSI4_9GAMM (CSD domain-containing protein n=4 Tax=Marinobacter TaxID=2742 RepID=G6YSI4_9GAMM)

HSP 1 Score: 325 bits (834), Expect = 6.720e-112
Identity = 168/169 (99.41%), Postives = 168/169 (99.41%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLIRM 169
            SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEI PVMLIRM
Sbjct:   42 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEIKPVMLIRM 210          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: A0A1E3C8Y5_9GAMM (CSD domain-containing protein n=8 Tax=Marinobacter TaxID=2742 RepID=A0A1E3C8Y5_9GAMM)

HSP 1 Score: 310 bits (793), Expect = 1.230e-105
Identity = 160/167 (95.81%), Postives = 162/167 (97.01%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLI 167
            SASRKVVYSQTKDEKGRLRA+SFQYAGVARHRAAVA GVWVALLIAAAVGG VSTLYL GYVPVLLPVAYGVMSLVTFLMYAIDKGAAESG+RRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFW YVILNLAVLGWLLFWPDAEFARQALEI PVMLI
Sbjct:   42 SASRKVVYSQTKDEKGRLRASSFQYAGVARHRAAVASGVWVALLIAAAVGGTVSTLYLQGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGSRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWFYVILNLAVLGWLLFWPDAEFARQALEIKPVMLI 208          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: A0A0P7WL31_9GAMM (Putative membrane protein n=1 Tax=Marinobacter sp. HL-58 TaxID=1479237 RepID=A0A0P7WL31_9GAMM)

HSP 1 Score: 289 bits (739), Expect = 2.140e-97
Identity = 147/169 (86.98%), Postives = 156/169 (92.31%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLIRM 169
            SASRKVVYSQTKDEKGRLRAASFQYAGVARHRA+ A GVWVALLIAAAV GA+S LYL  YVP+LLPVAYGVMSL+TFLMYA+DKGAAESGNRR+PEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQV FW  VILNLAV+GWLL WP AEFARQ LEI PVML+R+
Sbjct:   42 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRASFATGVWVALLIAAAVIGAISALYLQSYVPLLLPVAYGVMSLITFLMYAVDKGAAESGNRRIPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVAFWFNVILNLAVIGWLLVWPGAEFARQVLEIKPVMLMRI 210          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: A1U4X1_MARN8 (CSD domain-containing protein n=14 Tax=Marinobacter TaxID=2742 RepID=A1U4X1_MARN8)

HSP 1 Score: 277 bits (709), Expect = 8.480e-93
Identity = 142/167 (85.03%), Postives = 150/167 (89.82%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLI 167
            SASRKVVY+QTKDEKGRLRA+SFQYAGVARH AAVA GVW ALLIAAAV GAVS LY+ GYVPVLLP AYGVMS+VTFLMYA+DKGAAESG RRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTS+QV FW  V+LNLAV  WLL WP AEF RQALEI PVML+
Sbjct:   42 SASRKVVYAQTKDEKGRLRASSFQYAGVARHSAAVATGVWFALLIAAAVAGAVSVLYVQGYVPVLLPAAYGVMSVVTFLMYAVDKGAAESGGRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSYQVSFWFNVVLNLAVFCWLLLWPGAEFVRQALEIRPVMLL 208          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: A0A143HMH0_9GAMM (Uncharacterized membrane protein YsdA, DUF1294 family n=1 Tax=Microbulbifer thermotolerans TaxID=252514 RepID=A0A143HMH0_9GAMM)

HSP 1 Score: 248 bits (633), Expect = 2.730e-81
Identity = 125/169 (73.96%), Postives = 142/169 (84.02%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLIRM 169
            SASRKVVY Q+KD +GRL+AA FQY+GV+R  AA+ PGVW+ALLIA AV  ++S L+ LGYVP+ LP  YGVMSL+TFLMYA+DK AAE G+ RVPEGRLH FELLCGWPGALVGQQFFRHKTRK SFQ  FW YV+LNL VLGWLL WPDA+FARQ L IN VMLIR+
Sbjct:   42 SASRKVVYEQSKDAQGRLQAAQFQYSGVSRLGAALVPGVWIALLIATAVLASLSLLFKLGYVPLFLPATYGVMSLITFLMYAVDKRAAERGSWRVPEGRLHFFELLCGWPGALVGQQFFRHKTRKLSFQATFWFYVLLNLTVLGWLLAWPDADFARQQLGINAVMLIRI 210          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: A0A4P6W5I5_9GAMM (CSD domain-containing protein n=4 Tax=Marinobacter TaxID=2742 RepID=A0A4P6W5I5_9GAMM)

HSP 1 Score: 243 bits (620), Expect = 7.670e-79
Identity = 124/169 (73.37%), Postives = 141/169 (83.43%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLIRM 169
            S+ R+V ++ TKD++GRLRA+ FQYAG AR  A+VAPGVW+ LL+AA V GA+  L  L YVP+LLP AYGVMSLVTFLMYA+DKGAAE GN+RVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQ  FW+ V+LNLA LGWLL WP+AE ARQ L I PV LI M
Sbjct:   73 SSGRQVNFALTKDKQGRLRASQFQYAGAARLSASVAPGVWLGLLVAAGVLGALGLLSWLDYVPMLLPAAYGVMSLVTFLMYAVDKGAAERGNQRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQATFWLQVLLNLAALGWLLTWPEAESARQVLGIKPVWLIPM 241          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: UPI00140C3A26 (cold shock and DUF1294 domain-containing protein n=1 Tax=Marinobacter salicampi TaxID=435907 RepID=UPI00140C3A26)

HSP 1 Score: 207 bits (527), Expect = 3.890e-65
Identity = 106/166 (63.86%), Postives = 127/166 (76.51%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVML 166
            SA RKVVY+Q+KD +GRLRAA FQ AG AR RA+VAPGVW+ALL+AA   G +  L+  G VPV LP  Y  +SL+TF++YA+DK AA  G RRVPE RLHLF+LL GWPGAL+ QQ FRHKTRK SFQ ++W+ V LNLAVLGWLLFWP+A F RQ L +  + L
Sbjct:   42 SAHRKVVYNQSKDGQGRLRAAQFQCAGAARIRASVAPGVWLALLVAAGFVGGLGGLFATGVVPVALPATYLALSLLTFVLYAVDKSAAGRGERRVPEKRLHLFDLLGGWPGALIAQQLFRHKTRKGSFQFIYWLCVFLNLAVLGWLLFWPEAYFVRQELGVEQLRL 207          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: UPI001C5E5952 (DUF1294 domain-containing protein n=1 Tax=Marinobacter sp. F4206 TaxID=2861777 RepID=UPI001C5E5952)

HSP 1 Score: 206 bits (524), Expect = 1.180e-64
Identity = 103/167 (61.68%), Postives = 125/167 (74.85%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLI 167
            SA+R+V YS T+D +GR+RA  FQYAG+ R  A+VAPG W+AL++AA V G +S+ Y+ GY+PV +P AY  MSL+  + Y IDK AA  G+RRVPE RLHLFELLCGWPGAL+ QQ FRHKTRK SFQ  FWV VI NL  LGWLLFWP+A FAR+ L I  V  +
Sbjct:   42 SANREVRYSLTEDPQGRIRAGKFQYAGIGRLGASVAPGFWLALIVAAGVIGGLSSAYVFGYLPVAIPAAYAGMSLLALVTYGIDKAAAVKGHRRVPENRLHLFELLCGWPGALIAQQLFRHKTRKGSFQFGFWVCVIFNLGALGWLLFWPEAAFARRELGIEHVFFL 208          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: UPI001E37FBF1 (cold shock and DUF1294 domain-containing protein n=2 Tax=unclassified Marinobacter TaxID=83889 RepID=UPI001E37FBF1)

HSP 1 Score: 205 bits (522), Expect = 6.110e-64
Identity = 104/170 (61.18%), Postives = 129/170 (75.88%), Query Frame = 0
Query:    1 SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVGGAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQ------ALEINPV 164
            SA+R+V YS T+D +GR+RA  FQYAG+ R  A+VAPG W+ALL+A  V G + + Y  GY+PVL+P AY  MSL+  +MYA+DKGAA  G+RRVPE RLH+ ELLCGWPGALV QQ FRHKTRK SFQ  FW+ V+LN+A LGWLLFWP+A FAR+      AL +NP+
Sbjct:   72 SANREVRYSLTEDSQGRIRAGKFQYAGIGRLSASVAPGFWLALLVAIGVIGGLGSAYRFGYLPVLVPAAYAGMSLLALVMYAMDKGAAVKGHRRVPENRLHVLELLCGWPGALVAQQLFRHKTRKGSFQFGFWLCVLLNVAALGWLLFWPEAGFARRELGIDHALSLNPL 241          
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Match: UPI001E2FF2AB (DUF1294 domain-containing protein n=1 Tax=Marinobacter adhaerens TaxID=1033846 RepID=UPI001E2FF2AB)

HSP 1 Score: 196 bits (497), Expect = 3.350e-62
Identity = 94/97 (96.91%), Postives = 94/97 (96.91%), Query Frame = 0
Query:   73 MSLVTFLMYAIDKGAAESGNRRVPEGRLHLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEINPVMLIRM 169
            MSLVTFL YAIDKGAAESGNRRVPEGRLHL ELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEI PVMLIRM
Sbjct:    1 MSLVTFLTYAIDKGAAESGNRRVPEGRLHLLELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWPDAEFARQALEIKPVMLIRM 97          
The following BLAST results are available for this feature:
BLAST of mRNA_M-pyrifera_M_contig121780.4478.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
G6YSI4_9GAMM6.720e-11299.41CSD domain-containing protein n=4 Tax=Marinobacter... [more]
A0A1E3C8Y5_9GAMM1.230e-10595.81CSD domain-containing protein n=8 Tax=Marinobacter... [more]
A0A0P7WL31_9GAMM2.140e-9786.98Putative membrane protein n=1 Tax=Marinobacter sp.... [more]
A1U4X1_MARN88.480e-9385.03CSD domain-containing protein n=14 Tax=Marinobacte... [more]
A0A143HMH0_9GAMM2.730e-8173.96Uncharacterized membrane protein YsdA, DUF1294 fam... [more]
A0A4P6W5I5_9GAMM7.670e-7973.37CSD domain-containing protein n=4 Tax=Marinobacter... [more]
UPI00140C3A263.890e-6563.86cold shock and DUF1294 domain-containing protein n... [more]
UPI001C5E59521.180e-6461.68DUF1294 domain-containing protein n=1 Tax=Marinoba... [more]
UPI001E37FBF16.110e-6461.18cold shock and DUF1294 domain-containing protein n... [more]
UPI001E2FF2AB3.350e-6296.91DUF1294 domain-containing protein n=1 Tax=Marinoba... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0 of Macrocystis pyrifera male
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010718Protein of unknown function DUF1294PFAMPF06961DUF1294coord: 74..128
e-value: 1.0E-23
score: 83.3
NoneNo IPR availablePANTHERPTHR12962:SF1COLD SHOCK DOMAIN-CONTAINING PROTEIN CG9705coord: 5..148
NoneNo IPR availablePANTHERPTHR12962CALCIUM-REGULATED HEAT STABLE PROTEIN CRHSP-24-RELATEDcoord: 5..148
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 150..169
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 130..149
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 39..58
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 1..38
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 59..63
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 84..129
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 64..83
NoneNo IPR availableTMHMMTMhelixcoord: 130..149
NoneNo IPR availableTMHMMTMhelixcoord: 34..56
NoneNo IPR availableTMHMMTMhelixcoord: 61..83

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
M-pyrifera_M_contig121780contigM-pyrifera_M_contig121780:2..511 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.0 of Macrocystis pyrifera male2022-09-29
Diamond blastp: OGS1.0 of Macrocystis pyrifera male vs UniRef902022-09-16
OGS1.0 of Macrocystis pyrifera P11B4 male2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_M-pyrifera_M_contig121780.4478.1mRNA_M-pyrifera_M_contig121780.4478.1Macrocystis pyrifera P11B4 malemRNAM-pyrifera_M_contig121780 2..511 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_M-pyrifera_M_contig121780.4478.1 ID=prot_M-pyrifera_M_contig121780.4478.1|Name=mRNA_M-pyrifera_M_contig121780.4478.1|organism=Macrocystis pyrifera P11B4 male|type=polypeptide|length=170bp
SASRKVVYSQTKDEKGRLRAASFQYAGVARHRAAVAPGVWVALLIAAAVG
GAVSTLYLLGYVPVLLPVAYGVMSLVTFLMYAIDKGAAESGNRRVPEGRL
HLFELLCGWPGALVGQQFFRHKTRKTSFQVVFWVYVILNLAVLGWLLFWP
DAEFARQALEINPVMLIRM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010718DUF1294